EnhancerDB
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  3. vista4109[chr1:181149230-181149365]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4109[chr1:181149230-181149365]
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Tissue distribution of vista4109
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Transcription factor that possibly regulate vista4109[chr1:181149230-181149365]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 181149146 181149476 BHLHE40 UCSC Txn Factor no Conserved 107849677
chr1 181149254 181149265 ESRRB JASPAR yes 33562889
chr1 181149254 181149265 ESRRB JASPAR yes 118409047
chr1 181149263 181149279 RFX2 JASPAR yes 33562890
chr1 181149263 181149279 RFX5 JASPAR yes 33562891
chr1 181149263 181149279 RFX2 JASPAR yes 118409048
chr1 181149263 181149279 RFX5 JASPAR yes 118409049
chr1 181149264 181149283 RFX2 JASPAR yes 33562892
chr1 181149264 181149283 RFX2 JASPAR yes 118409050
chr1 181149266 181149281 RFX5 JASPAR yes 33562893
chr1 181149266 181149281 RFX5 JASPAR yes 118409051
chr1 181149282 181149296 ZIC1 JASPAR yes 33562894
chr1 181149282 181149296 ZIC1 JASPAR yes 118409052
chr1 181149295 181149307 PKNOX2 JASPAR yes 33562895
chr1 181149295 181149307 PKNOX2 JASPAR yes 118409053
chr1 181149317 181149327 MAX JASPAR yes 33562896
chr1 181149317 181149327 MAX JASPAR yes 118409054
chr1 181149318 181149328 BHLHE40 JASPAR yes 33562897
chr1 181149318 181149328 CLOCK JASPAR yes 33562898
chr1 181149318 181149328 HEY1 JASPAR yes 33562899
chr1 181149318 181149328 MAX JASPAR yes 33562900
chr1 181149318 181149328 MLXIPL JASPAR yes 33562901
chr1 181149318 181149328 MLX JASPAR yes 33562902
chr1 181149318 181149328 MNT JASPAR yes 33562903
chr1 181149318 181149328 BHLHE40 JASPAR yes 118409055
chr1 181149318 181149328 CLOCK JASPAR yes 118409056
chr1 181149318 181149328 HEY1 JASPAR yes 118409057
chr1 181149318 181149328 MAX JASPAR yes 118409058
chr1 181149318 181149328 MLXIPL JASPAR yes 118409059
chr1 181149318 181149328 MLX JASPAR yes 118409060
chr1 181149318 181149328 MNT JASPAR yes 118409061
chr1 181149320 181149325 MYC TRANSFAC yes 33562904
chr1 181149320 181149325 USF1 TRANSFAC yes 33562905
chr1 181149320 181149325 USF2 TRANSFAC yes 33562906
chr1 181149320 181149325 MYC TRANSFAC yes 118409062
chr1 181149320 181149325 USF1 TRANSFAC yes 118409063
chr1 181149320 181149325 USF2 TRANSFAC yes 118409064
chr1 181149323 181149335 NHLH1 JASPAR yes 33562907
chr1 181149323 181149335 NHLH1 JASPAR yes 118409065
chr1 181149324 181149334 NHLH1 JASPAR yes 33562908
chr1 181149324 181149334 NHLH1 JASPAR yes 118409066
chr1 181149332 181149336 LFA1 TRANSFAC yes 33562909
chr1 181149332 181149336 LFA1 TRANSFAC yes 118409067
chr1 181149338 181149357 RFX2 JASPAR yes 33562910
chr1 181149338 181149357 RFX2 JASPAR yes 118409068
chr1 181149340 181149355 RFX5 JASPAR yes 33562911
chr1 181149340 181149355 RFX5 JASPAR yes 118409069
chr1 181149342 181149358 RFX2 JASPAR yes 33562912
chr1 181149342 181149358 RFX3 JASPAR yes 33562913
chr1 181149342 181149358 RFX5 JASPAR yes 33562914
chr1 181149342 181149358 RFX2 JASPAR yes 118409070
chr1 181149342 181149358 RFX3 JASPAR yes 118409071
chr1 181149342 181149358 RFX5 JASPAR yes 118409072
chr1 181149353 181149362 SOX9 JASPAR yes 33562915
chr1 181149353 181149362 SOX9 JASPAR yes 118409073
SNP sites on vista4109[chr1:181149230-181149365]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 181149280 rs564311937 T C,G
BHLHE40 RFX2 RFX5
768666
chr1 181149362 rs35975445 ACT A
BHLHE40 SOX9
768667
Genes possibly regulated by vista4109[chr1:181149230-181149365]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 181057638 181059977 + IER5 ENSG00000162783.8 181057638 0.82 1.0 1625 8408
Expression level of Genes
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miRNAs possibly regulated by vista4109[chr1:181149230-181149365]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results