EnhancerDB
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  3. vista41090[chr3:57664290-57664400]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41090[chr3:57664290-57664400]
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Tissue distribution of vista41090
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Transcription factor that possibly regulate vista41090[chr3:57664290-57664400]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 57664293 57664297 YY1 TRANSFAC yes 70989852
chr3 57664315 57664333 RARA JASPAR yes 70989853
chr3 57664317 57664327 ALX3 JASPAR yes 70989854
chr3 57664317 57664327 EMX1 JASPAR yes 70989855
chr3 57664317 57664327 EMX2 JASPAR yes 70989856
chr3 57664317 57664327 EN2 JASPAR yes 70989857
chr3 57664317 57664327 ESX1 JASPAR yes 70989858
chr3 57664317 57664327 EVX1 JASPAR yes 70989859
chr3 57664317 57664327 EVX2 JASPAR yes 70989860
chr3 57664317 57664327 GBX1 JASPAR yes 70989861
chr3 57664317 57664327 GBX2 JASPAR yes 70989862
chr3 57664317 57664327 GSX1 JASPAR yes 70989863
chr3 57664317 57664327 HOXA2 JASPAR yes 70989864
chr3 57664317 57664327 HOXB2 JASPAR yes 70989865
chr3 57664317 57664327 HOXB3 JASPAR yes 70989866
chr3 57664317 57664327 LHX2 JASPAR yes 70989867
chr3 57664317 57664327 LHX6 JASPAR yes 70989868
chr3 57664317 57664327 MEOX1 JASPAR yes 70989869
chr3 57664317 57664327 MEOX2 JASPAR yes 70989870
chr3 57664317 57664327 NOTO JASPAR yes 70989871
chr3 57664317 57664331 RORA JASPAR yes 70989872
chr3 57664318 57664326 DLX6 JASPAR yes 70989873
chr3 57664318 57664326 EN1 JASPAR yes 70989874
chr3 57664318 57664326 LBX1 JASPAR yes 70989875
chr3 57664318 57664326 PAX4 JASPAR yes 70989876
chr3 57664318 57664326 PDX1 JASPAR yes 70989877
chr3 57664318 57664326 VAX1 JASPAR yes 70989878
chr3 57664318 57664326 VAX2 JASPAR yes 70989879
chr3 57664318 57664326 VSX1 JASPAR yes 70989880
chr3 57664318 57664326 VSX2 JASPAR yes 70989881
chr3 57664318 57664328 POU6F2 JASPAR yes 70989882
chr3 57664318 57664331 DUXA JASPAR yes 70989883
chr3 57664318 57664331 JUN JASPAR yes 70989884
chr3 57664319 57664330 PHOX2A JASPAR yes 70989885
chr3 57664320 57664330 RORA JASPAR yes 70989886
chr3 57664325 57664329 ESR1 TRANSFAC yes 70989887
chr3 57664340 57664351 USF2 JASPAR yes 70989888
chr3 57664341 57664351 TFEB JASPAR yes 70989889
chr3 57664341 57664351 TFEC JASPAR yes 70989890
chr3 57664343 57664361 TP63 JASPAR yes 70989891
chr3 57664345 57664360 TP53 JASPAR yes 70989892
chr3 57664348 57664354 YY1 JASPAR yes 70989893
chr3 57664359 57664375 SRF JASPAR yes 70989894
chr3 57664359 57664377 SRF JASPAR yes 70989895
chr3 57664360 57664372 SRF JASPAR yes 70989896
chr3 57664365 57664369 TEAD2 TRANSFAC yes 70989897
chr3 57664368 57664379 ETV2 JASPAR yes 70989898
chr3 57664369 57664376 SPIB JASPAR yes 70989899
chr3 57664374 57664380 HiNF-A TRANSFAC yes 70989900
SNP sites on vista41090[chr3:57664290-57664400]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 57664302 rs557992469 G A no 6757353
chr3 57664336 rs371032983 G A no 6757354
chr3 57664388 rs146035611 C A no 6757355
Genes possibly regulated by vista41090[chr3:57664290-57664400]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 57557090 57583947 - ARF4 ENSG00000168374.6 57583947 0.59 0.99 3793 19657
chr3 57611184 57678816 - DENND6A ENSG00000174839.8 57678816 0.64 1.0 3794 85584
chr3 57741177 57914895 + SLMAP ENSG00000163681.10 57741177 0.82 0.99 3795 23223
Expression level of Genes
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miRNAs possibly regulated by vista41090[chr3:57664290-57664400]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results