EnhancerDB
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  3. vista41111[chr3:58159699-58160034]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41111[chr3:58159699-58160034]
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Tissue distribution of vista41111
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Transcription factor that possibly regulate vista41111[chr3:58159699-58160034]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 58159534 58159975 CTCF UCSC Txn Factor no Conserved 108529387
chr3 58159573 58159867 SMC3 UCSC Txn Factor no Conserved 108529388
chr3 58159584 58159850 RAD21 UCSC Txn Factor no Conserved 108529389
chr3 58159680 58159699 CTCF JASPAR yes 2677854
chr3 58159680 58159699 CTCF JASPAR yes 70990851
chr3 58159691 58159709 NR3C1 JASPAR yes 2677863
chr3 58159691 58159709 NR3C1 JASPAR yes 70990852
chr3 58159716 58159735 CTCF JASPAR yes 2677864
chr3 58159716 58159735 CTCF JASPAR yes 70990853
chr3 58159718 58159723 SP1 TRANSFAC yes 2677865
chr3 58159718 58159723 SP1 TRANSFAC yes 70990854
chr3 58159718 58159724 SP1 TRANSFAC yes 2677866
chr3 58159718 58159724 SP1 TRANSFAC yes 70990855
chr3 58159718 58159725 SP1 TRANSFAC yes 2677867
chr3 58159718 58159725 SP1 TRANSFAC yes 70990856
chr3 58159719 58159731 INSM1 JASPAR yes 2677868
chr3 58159719 58159731 INSM1 JASPAR yes 70990857
chr3 58159734 58159744 NFIA JASPAR yes 2677869
chr3 58159734 58159744 NFIA JASPAR yes 70990858
chr3 58159735 58159744 NFIX JASPAR yes 2677870
chr3 58159735 58159744 NFIX JASPAR yes 70990859
chr3 58159736 58159742 NFIC JASPAR yes 2677871
chr3 58159736 58159742 NFIC JASPAR yes 70990860
chr3 58159789 58159804 TFAP2C JASPAR yes 2677872
chr3 58159789 58159804 TFAP2C JASPAR yes 70990861
chr3 58159792 58159812 PPARG JASPAR yes 2677873
chr3 58159792 58159812 PPARG JASPAR yes 70990862
chr3 58159805 58159811 MZF1 JASPAR yes 2677874
chr3 58159805 58159811 MZF1 JASPAR yes 70990863
chr3 58159805 58159824 CTCF JASPAR yes 2677875
chr3 58159805 58159824 CTCF JASPAR yes 70990864
chr3 58159828 58159839 NFIL3 JASPAR yes 2677876
chr3 58159828 58159839 NFIL3 JASPAR yes 70990865
chr3 58159831 58159845 TCF7L2 JASPAR yes 2677877
chr3 58159831 58159845 TCF7L2 JASPAR yes 70990866
chr3 58159831 58159846 LEF1 JASPAR yes 2677878
chr3 58159831 58159846 LEF1 JASPAR yes 70990867
chr3 58159851 58159856 SP1 TRANSFAC yes 2677879
chr3 58159851 58159856 SP1 TRANSFAC yes 70990868
chr3 58159861 58159875 GATA2 JASPAR yes 2677880
chr3 58159861 58159875 GATA2 JASPAR yes 70990869
chr3 58159892 58159896 LFA1 TRANSFAC yes 2677881
chr3 58159892 58159896 LFA1 TRANSFAC yes 70990870
chr3 58159899 58159908 ZEB1 JASPAR yes 2677882
chr3 58159899 58159908 ZEB1 JASPAR yes 70990871
chr3 58159906 58159916 ID4 JASPAR yes 2677883
chr3 58159906 58159916 TCF3 JASPAR yes 2677884
chr3 58159906 58159916 TCF4 JASPAR yes 2677885
chr3 58159906 58159916 ID4 JASPAR yes 70990872
chr3 58159906 58159916 TCF3 JASPAR yes 70990873
chr3 58159906 58159916 TCF4 JASPAR yes 70990874
chr3 58159908 58159913 USF2 TRANSFAC yes 2677886
chr3 58159908 58159913 USF2 TRANSFAC yes 70990875
chr3 58159915 58159934 RFX2 JASPAR yes 2677887
chr3 58159915 58159934 RFX2 JASPAR yes 70990876
chr3 58159919 58159935 RFX2 JASPAR yes 2677888
chr3 58159919 58159935 RFX3 JASPAR yes 2677889
chr3 58159919 58159935 RFX4 JASPAR yes 2677890
chr3 58159919 58159935 RFX5 JASPAR yes 2677891
chr3 58159919 58159935 RFX2 JASPAR yes 70990877
chr3 58159919 58159935 RFX3 JASPAR yes 70990878
chr3 58159919 58159935 RFX4 JASPAR yes 70990879
chr3 58159919 58159935 RFX5 JASPAR yes 70990880
chr3 58159920 58159939 RFX2 JASPAR yes 2677892
chr3 58159920 58159939 RFX2 JASPAR yes 70990881
chr3 58159930 58159942 TAL1 JASPAR yes 2677893
chr3 58159930 58159942 TAL1 JASPAR yes 70990882
chr3 58159930 58159943 ZBTB18 JASPAR yes 2677894
chr3 58159930 58159943 ZBTB18 JASPAR yes 70990883
chr3 58159932 58159942 FIGLA JASPAR yes 2677895
chr3 58159932 58159942 MSC JASPAR yes 2677896
chr3 58159932 58159942 MYF6 JASPAR yes 2677897
chr3 58159932 58159942 TFAP4 JASPAR yes 2677898
chr3 58159932 58159942 FIGLA JASPAR yes 70990884
chr3 58159932 58159942 MSC JASPAR yes 70990885
chr3 58159932 58159942 MYF6 JASPAR yes 70990886
chr3 58159932 58159942 TFAP4 JASPAR yes 70990887
chr3 58159932 58159944 TAL1 JASPAR yes 2677899
chr3 58159932 58159944 TAL1 JASPAR yes 70990888
chr3 58159964 58159978 RXRB JASPAR yes 2677900
chr3 58159964 58159978 RXRG JASPAR yes 2677901
chr3 58159964 58159978 RXRB JASPAR yes 70990889
chr3 58159964 58159978 RXRG JASPAR yes 70990890
chr3 58159981 58159995 TLX1 JASPAR yes 2677902
chr3 58159981 58159995 TLX1 JASPAR yes 70990891
chr3 58159995 58159999 H4TF2 TRANSFAC yes 2677903
chr3 58159995 58159999 H4TF2 TRANSFAC yes 70990892
chr3 58160000 58160006 ETS1 JASPAR yes 2677904
chr3 58160000 58160006 ETS1 JASPAR yes 70990893
chr3 58160010 58160025 FOXP1 JASPAR yes 2677905
chr3 58160010 58160025 FOXP1 JASPAR yes 70990894
chr3 58160011 58160022 FOXP2 JASPAR yes 2677906
chr3 58160011 58160022 FOXP2 JASPAR yes 70990895
chr3 58160011 58160023 FOXC2 JASPAR yes 2677907
chr3 58160011 58160023 FOXC2 JASPAR yes 70990896
chr3 58160013 58160024 FOXA1 JASPAR yes 2677908
chr3 58160013 58160024 FOXA1 JASPAR yes 70990897
chr3 58160021 58160039 IRF2 JASPAR yes 2677909
chr3 58160021 58160039 IRF2 JASPAR yes 70990898
SNP sites on vista41111[chr3:58159699-58160034]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 58159723 rs78874656 C T
CTCF INSM1 RAD21 SMC3 SP1
6760885
chr3 58159832 rs79022947 T C
CTCF LEF1 NFIL3 RAD21 SMC3 TCF7L2
6760886
chr3 58159870 rs141383671 A C
CTCF GATA2
6760887
chr3 58159893 rs7627013 G A
CTCF LFA1
6760888
Genes possibly regulated by vista41111[chr3:58159699-58160034]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 58177984 58200424 - DNASE1L3 ENSG00000163687.9 58200424 0.93 0.88 3797 59610
chr3 58223233 58281420 + ABHD6 ENSG00000163686.9 58223233 0.84 0.99 3798 36801
Expression level of Genes
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miRNAs possibly regulated by vista41111[chr3:58159699-58160034]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results