EnhancerDB
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  3. vista41113[chr3:58163548-58163776]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41113[chr3:58163548-58163776]
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Tissue distribution of vista41113
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Transcription factor that possibly regulate vista41113[chr3:58163548-58163776]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 58163391 58163815 CTCF UCSC Txn Factor no Conserved 108529390
chr3 58163484 58163759 RAD21 UCSC Txn Factor no Conserved 108529391
chr3 58163505 58163747 RUNX3 UCSC Txn Factor no Conserved 108529392
chr3 58163552 58163557 ETS2 TRANSFAC yes 2678341
chr3 58163552 58163557 ETS2 TRANSFAC yes 70990918
chr3 58163560 58163574 PLAG1 JASPAR yes 2678342
chr3 58163560 58163574 PLAG1 JASPAR yes 70990919
chr3 58163564 58163573 TFAP2A JASPAR yes 2678343
chr3 58163564 58163573 TFAP2A JASPAR yes 70990920
chr3 58163599 58163617 ESR1 JASPAR yes 2678344
chr3 58163599 58163617 ESR1 JASPAR yes 70990921
chr3 58163609 58163628 CTCF JASPAR yes 2678345
chr3 58163609 58163628 CTCF JASPAR yes 70990922
chr3 58163616 58163635 RFX2 JASPAR yes 2678346
chr3 58163616 58163635 RFX2 JASPAR yes 70990923
chr3 58163620 58163636 RFX2 JASPAR yes 2678347
chr3 58163620 58163636 RFX3 JASPAR yes 2678348
chr3 58163620 58163636 RFX5 JASPAR yes 2678349
chr3 58163620 58163636 RFX2 JASPAR yes 70990924
chr3 58163620 58163636 RFX3 JASPAR yes 70990925
chr3 58163620 58163636 RFX5 JASPAR yes 70990926
chr3 58163640 58163650 HINFP JASPAR yes 2678350
chr3 58163640 58163650 HINFP JASPAR yes 70990927
chr3 58163640 58163652 HINFP JASPAR yes 2678351
chr3 58163640 58163652 HINFP JASPAR yes 70990928
chr3 58163665 58163670 SP1 TRANSFAC yes 2678352
chr3 58163665 58163670 SP1 TRANSFAC yes 70990929
chr3 58163667 58163672 TFAP2A TRANSFAC yes 2678353
chr3 58163667 58163672 TFAP2A TRANSFAC yes 70990930
chr3 58163667 58163673 MZF1 JASPAR yes 2678354
chr3 58163667 58163673 MZF1 JASPAR yes 70990931
chr3 58163669 58163674 ETS2 TRANSFAC yes 2678355
chr3 58163669 58163674 ETS2 TRANSFAC yes 70990932
chr3 58163674 58163685 NRF1 JASPAR yes 2678356
chr3 58163674 58163685 NRF1 JASPAR yes 70990933
chr3 58163695 58163705 SP1 JASPAR yes 2678357
chr3 58163695 58163705 SP1 JASPAR yes 70990934
chr3 58163696 58163703 CEBPA TRANSFAC yes 2678358
chr3 58163696 58163703 CEBPA TRANSFAC yes 70990935
chr3 58163698 58163708 MZF1 JASPAR yes 2678359
chr3 58163698 58163708 MZF1 JASPAR yes 70990936
chr3 58163700 58163713 NFKB1 JASPAR yes 2678360
chr3 58163700 58163713 NFKB1 JASPAR yes 70990937
chr3 58163765 58163775 SP1 JASPAR yes 2678361
chr3 58163765 58163775 SP1 JASPAR yes 70990938
chr3 58163768 58163773 SP1 TRANSFAC yes 2678362
chr3 58163768 58163773 SP1 TRANSFAC yes 70990939
chr3 58163772 58163776 LFA1 TRANSFAC yes 2678363
chr3 58163772 58163776 LFA1 TRANSFAC yes 70990940
SNP sites on vista41113[chr3:58163548-58163776]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 58163568 rs9829947 T G
CTCF PLAG1 RAD21 RUNX3 TFAP2A
6760936
chr3 58163605 rs560383407 C T
CTCF ESR1 RAD21 RUNX3
6760937
chr3 58163665 rs573894591 C A
CTCF RAD21 RUNX3 SP1
6760938
chr3 58163681 rs562545508 G A
CTCF NRF1 RAD21 RUNX3
6760939
chr3 58163692 rs6797266 A G
CTCF RAD21 RUNX3
6760940
chr3 58163707 rs371680573 A C
CTCF MZF1 NFKB1 RAD21 RUNX3
6760941
chr3 58163747 rs564845201 G A
CTCF RAD21 RUNX3
6760942
chr3 58163750 rs77723975 C G
CTCF RAD21
6760943
Genes possibly regulated by vista41113[chr3:58163548-58163776]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 58177984 58200424 - DNASE1L3 ENSG00000163687.9 58200424 0.93 0.88 3797 63352
chr3 58223233 58281420 + ABHD6 ENSG00000163686.9 58223233 0.84 0.99 3798 40543
Expression level of Genes
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miRNAs possibly regulated by vista41113[chr3:58163548-58163776]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results