EnhancerDB
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  3. vista41123[chr3:58339773-58340193]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41123[chr3:58339773-58340193]
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Tissue distribution of vista41123
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Transcription factor that possibly regulate vista41123[chr3:58339773-58340193]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 58339946 58340270 CEBPB UCSC Txn Factor no Conserved 108529400
chr3 58339800 58339804 LFA1 TRANSFAC yes 2688750
chr3 58339800 58339804 LFA1 TRANSFAC yes 70991237
chr3 58339823 58339844 ZNF263 JASPAR yes 2688751
chr3 58339823 58339844 ZNF263 JASPAR yes 70991238
chr3 58339837 58339843 ZNF354C JASPAR yes 2688752
chr3 58339837 58339843 ZNF354C JASPAR yes 70991239
chr3 58339862 58339866 NFE TRANSFAC yes 2688753
chr3 58339862 58339866 NFE TRANSFAC yes 70991240
chr3 58339863 58339868 GATA2 JASPAR yes 2688754
chr3 58339863 58339868 GATA2 JASPAR yes 70991241
chr3 58339873 58339884 BATF JASPAR yes 2688755
chr3 58339873 58339884 BATF JASPAR yes 70991242
chr3 58339877 58339888 FLI1 JASPAR yes 2688756
chr3 58339877 58339888 FLI1 JASPAR yes 70991243
chr3 58339878 58339882 YY1 TRANSFAC yes 2688757
chr3 58339878 58339882 YY1 TRANSFAC yes 70991244
chr3 58339879 58339887 FEV JASPAR yes 2688758
chr3 58339879 58339887 FEV JASPAR yes 70991245
chr3 58339883 58339902 CTCF JASPAR yes 2688759
chr3 58339883 58339902 CTCF JASPAR yes 70991246
chr3 58339892 58339910 RARA JASPAR yes 2688760
chr3 58339892 58339910 RARA JASPAR yes 70991247
chr3 58339928 58339934 NFIC JASPAR yes 2688761
chr3 58339928 58339934 NFIC JASPAR yes 70991248
chr3 58339933 58339939 GATA3 JASPAR yes 2688762
chr3 58339933 58339939 GATA3 JASPAR yes 70991249
chr3 58339986 58339991 H4TF1 TRANSFAC yes 2688763
chr3 58339986 58339991 H4TF1 TRANSFAC yes 70991250
chr3 58340018 58340030 INSM1 JASPAR yes 2688764
chr3 58340018 58340030 INSM1 JASPAR yes 70991251
chr3 58340051 58340072 ZNF263 JASPAR yes 2688765
chr3 58340051 58340072 ZNF263 JASPAR yes 70991252
chr3 58340054 58340064 SP1 JASPAR yes 2688766
chr3 58340054 58340064 SP1 JASPAR yes 70991253
chr3 58340054 58340075 ZNF263 JASPAR yes 2688767
chr3 58340054 58340075 ZNF263 JASPAR yes 70991254
chr3 58340057 58340062 SP1 TRANSFAC yes 2688768
chr3 58340057 58340062 SP1 TRANSFAC yes 70991255
chr3 58340059 58340064 TFAP2A TRANSFAC yes 2688769
chr3 58340059 58340064 TFAP2A TRANSFAC yes 70991256
chr3 58340059 58340065 MZF1 JASPAR yes 2688770
chr3 58340059 58340065 MZF1 JASPAR yes 70991257
chr3 58340088 58340108 RREB1 JASPAR yes 2688771
chr3 58340088 58340108 RREB1 JASPAR yes 70991258
chr3 58340091 58340111 RREB1 JASPAR yes 2688772
chr3 58340091 58340111 RREB1 JASPAR yes 70991259
chr3 58340100 58340112 ZBTB7B JASPAR yes 2688773
chr3 58340100 58340112 ZBTB7C JASPAR yes 2688774
chr3 58340100 58340112 ZBTB7B JASPAR yes 70991260
chr3 58340100 58340112 ZBTB7C JASPAR yes 70991261
chr3 58340101 58340113 ZBTB7A JASPAR yes 2688775
chr3 58340101 58340113 ZBTB7A JASPAR yes 70991262
chr3 58340106 58340117 CEBPB JASPAR yes 2688776
chr3 58340106 58340117 CEBPB JASPAR yes 70991263
chr3 58340106 58340118 HLF JASPAR yes 2688777
chr3 58340106 58340118 JDP2 JASPAR yes 2688778
chr3 58340106 58340118 HLF JASPAR yes 70991264
chr3 58340106 58340118 JDP2 JASPAR yes 70991265
chr3 58340106 58340119 ATF4 JASPAR yes 2688779
chr3 58340106 58340119 ATF4 JASPAR yes 70991266
chr3 58340106 58340121 JUND JASPAR yes 2688780
chr3 58340106 58340121 JUND JASPAR yes 70991267
chr3 58340107 58340117 CEBPB JASPAR yes 2688781
chr3 58340107 58340117 CEBPD JASPAR yes 2688782
chr3 58340107 58340117 CEBPE JASPAR yes 2688783
chr3 58340107 58340117 CEBPG JASPAR yes 2688784
chr3 58340107 58340117 CEBPB JASPAR yes 70991268
chr3 58340107 58340117 CEBPD JASPAR yes 70991269
chr3 58340107 58340117 CEBPE JASPAR yes 70991270
chr3 58340107 58340117 CEBPG JASPAR yes 70991271
chr3 58340107 58340120 JUN JASPAR yes 2688785
chr3 58340107 58340120 JUN JASPAR yes 70991272
chr3 58340109 58340115 ATF1 TRANSFAC yes 2688786
chr3 58340109 58340115 ATF1 TRANSFAC yes 70991273
chr3 58340109 58340116 XBP1 TRANSFAC yes 2688787
chr3 58340109 58340116 XBP1 TRANSFAC yes 70991274
chr3 58340121 58340126 ETS2 TRANSFAC yes 2688788
chr3 58340121 58340126 ETS2 TRANSFAC yes 70991275
chr3 58340141 58340155 IRF7 JASPAR yes 2688789
chr3 58340141 58340155 IRF7 JASPAR yes 70991276
chr3 58340142 58340157 MEF2A JASPAR yes 2688790
chr3 58340142 58340157 MEF2A JASPAR yes 70991277
chr3 58340142 58340162 RREB1 JASPAR yes 2688791
chr3 58340142 58340162 RREB1 JASPAR yes 70991278
chr3 58340143 58340158 MEF2C JASPAR yes 2688792
chr3 58340143 58340158 MEF2C JASPAR yes 70991279
chr3 58340144 58340164 RREB1 JASPAR yes 2688793
chr3 58340144 58340164 RREB1 JASPAR yes 70991280
chr3 58340146 58340150 YY1 TRANSFAC yes 2688794
chr3 58340146 58340150 YY1 TRANSFAC yes 70991281
chr3 58340146 58340161 RUNX2 JASPAR yes 2688795
chr3 58340146 58340161 RUNX2 JASPAR yes 70991282
chr3 58340146 58340163 ZNF410 JASPAR yes 2688796
chr3 58340146 58340163 ZNF410 JASPAR yes 70991283
chr3 58340150 58340160 RUNX3 JASPAR yes 2688797
chr3 58340150 58340160 RUNX3 JASPAR yes 70991284
chr3 58340169 58340190 IRF1 JASPAR yes 2688798
chr3 58340169 58340190 IRF1 JASPAR yes 70991285
chr3 58340170 58340191 IRF1 JASPAR yes 2688799
chr3 58340170 58340191 IRF1 JASPAR yes 70991286
chr3 58340171 58340186 STAT2 JASPAR yes 2688800
chr3 58340171 58340186 STAT2 JASPAR yes 70991287
chr3 58340174 58340189 FOXP1 JASPAR yes 2688801
chr3 58340174 58340189 FOXP1 JASPAR yes 70991288
chr3 58340175 58340190 FOXP1 JASPAR yes 2688802
chr3 58340175 58340190 FOXP1 JASPAR yes 70991289
chr3 58340176 58340191 FOXP1 JASPAR yes 2688803
chr3 58340176 58340191 FOXP1 JASPAR yes 70991290
chr3 58340177 58340192 FOXP1 JASPAR yes 2688804
chr3 58340177 58340192 FOXP1 JASPAR yes 70991291
chr3 58340178 58340193 FOXP1 JASPAR yes 2688805
chr3 58340178 58340193 FOXP1 JASPAR yes 70991292
chr3 58340179 58340194 FOXP1 JASPAR yes 2688806
chr3 58340179 58340194 FOXP1 JASPAR yes 70991293
SNP sites on vista41123[chr3:58339773-58340193]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 58339779 rs143985778 C T no 6762089
chr3 58339786 rs146889787 G A no 6762090
chr3 58339924 rs6771642 C T no 6762091
chr3 58339934 rs114835022 A G
GATA3 NFIC
6762092
chr3 58339997 rs140709655 G A
CEBPB
6762093
chr3 58340159 rs148133525 G C
CEBPB RREB1 RUNX2 RUNX3 ZNF410
6762094
chr3 58340175 rs13066167 G A
CEBPB FOXP1 IRF1 STAT2
6762095
Genes possibly regulated by vista41123[chr3:58339773-58340193]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 58291974 58310422 + RPP14 ENSG00000163684.7 58291974 0.69 0.99 3799 52201
chr3 58303341 58303847 + RPP14 ENSG00000255154.3 58303341 0.83 0.84 3800 63568
chr3 58318607 58411748 + PXK ENSG00000168297.11 58318607 0.76 0.99 3801 78834
chr3 58413357 58419584 - PDHB ENSG00000168291.8 58419584 0.55 0.99 3802 20609
Expression level of Genes
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miRNAs possibly regulated by vista41123[chr3:58339773-58340193]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results