EnhancerDB
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  3. vista41127[chr3:58400417-58400633]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41127[chr3:58400417-58400633]
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Tissue distribution of vista41127
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Transcription factor that possibly regulate vista41127[chr3:58400417-58400633]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 58400308 58400732 CTCF UCSC Txn Factor no Conserved 108529402
chr3 58400372 58400659 SMC3 UCSC Txn Factor no Conserved 108529403
chr3 58400375 58400650 RAD21 UCSC Txn Factor no Conserved 108529404
chr3 58400432 58400443 STAT1 JASPAR yes 2694508
chr3 58400432 58400443 STAT3 JASPAR yes 2694509
chr3 58400432 58400443 STAT1 JASPAR yes 70991396
chr3 58400432 58400443 STAT3 JASPAR yes 70991397
chr3 58400439 58400451 SRF JASPAR yes 2694510
chr3 58400439 58400451 SRF JASPAR yes 70991398
chr3 58400451 58400472 ZNF263 JASPAR yes 2694511
chr3 58400451 58400472 ZNF263 JASPAR yes 70991399
chr3 58400453 58400474 ZNF263 JASPAR yes 2694512
chr3 58400453 58400474 ZNF263 JASPAR yes 70991400
chr3 58400456 58400471 LEF1 JASPAR yes 2694513
chr3 58400456 58400471 LEF1 JASPAR yes 70991401
chr3 58400457 58400471 GATA2 JASPAR yes 2694514
chr3 58400457 58400471 TCF7L2 JASPAR yes 2694515
chr3 58400457 58400471 GATA2 JASPAR yes 70991402
chr3 58400457 58400471 TCF7L2 JASPAR yes 70991403
chr3 58400461 58400469 GATA3 JASPAR yes 2694516
chr3 58400461 58400469 GATA3 JASPAR yes 70991404
chr3 58400477 58400483 TCF4 TRANSFAC yes 2694517
chr3 58400477 58400483 TCF4 TRANSFAC yes 70991405
chr3 58400482 58400495 DUXA JASPAR yes 2694518
chr3 58400482 58400495 DUXA JASPAR yes 70991406
chr3 58400483 58400494 DUX4 JASPAR yes 2694519
chr3 58400483 58400494 DUX4 JASPAR yes 70991407
chr3 58400488 58400499 BATF JASPAR yes 2694520
chr3 58400488 58400499 BATF JASPAR yes 70991408
chr3 58400490 58400501 FOSL1 JASPAR yes 2694521
chr3 58400490 58400501 FOSL1 JASPAR yes 70991409
chr3 58400492 58400503 BATF JASPAR yes 2694522
chr3 58400492 58400503 BATF JASPAR yes 70991410
chr3 58400505 58400518 NR2F1 JASPAR yes 2694523
chr3 58400505 58400518 NR2F1 JASPAR yes 70991411
chr3 58400506 58400525 CTCF JASPAR yes 2694524
chr3 58400506 58400525 CTCF JASPAR yes 70991412
chr3 58400509 58400526 RARA JASPAR yes 2694525
chr3 58400509 58400526 RARA JASPAR yes 70991413
chr3 58400517 58400526 HIC2 JASPAR yes 2694526
chr3 58400517 58400526 HIC2 JASPAR yes 70991414
chr3 58400520 58400524 LFA1 TRANSFAC yes 2694527
chr3 58400520 58400524 LFA1 TRANSFAC yes 70991415
chr3 58400520 58400530 REL JASPAR yes 2694528
chr3 58400520 58400530 REL JASPAR yes 70991416
chr3 58400520 58400531 NFKB1 JASPAR yes 2694529
chr3 58400520 58400531 NFKB1 JASPAR yes 70991417
chr3 58400522 58400533 ELK4 JASPAR yes 2694530
chr3 58400522 58400533 FLI1 JASPAR yes 2694531
chr3 58400522 58400533 ELK4 JASPAR yes 70991418
chr3 58400522 58400533 FLI1 JASPAR yes 70991419
chr3 58400522 58400539 BCL6B JASPAR yes 2694532
chr3 58400522 58400539 BCL6B JASPAR yes 70991420
chr3 58400523 58400527 YY1 TRANSFAC yes 2694533
chr3 58400523 58400527 YY1 TRANSFAC yes 70991421
chr3 58400523 58400533 ERF JASPAR yes 2694534
chr3 58400523 58400533 ERG JASPAR yes 2694535
chr3 58400523 58400533 ETS1 JASPAR yes 2694536
chr3 58400523 58400533 FEV JASPAR yes 2694537
chr3 58400523 58400533 FLI1 JASPAR yes 2694538
chr3 58400523 58400533 ERF JASPAR yes 70991422
chr3 58400523 58400533 ERG JASPAR yes 70991423
chr3 58400523 58400533 ETS1 JASPAR yes 70991424
chr3 58400523 58400533 FEV JASPAR yes 70991425
chr3 58400523 58400533 FLI1 JASPAR yes 70991426
chr3 58400523 58400534 ETV2 JASPAR yes 2694539
chr3 58400523 58400534 ETV2 JASPAR yes 70991427
chr3 58400523 58400536 ELF1 JASPAR yes 2694540
chr3 58400523 58400536 ELF1 JASPAR yes 70991428
chr3 58400523 58400538 STAT1 JASPAR yes 2694541
chr3 58400523 58400538 STAT1 JASPAR yes 70991429
chr3 58400524 58400532 FEV JASPAR yes 2694542
chr3 58400524 58400532 FEV JASPAR yes 70991430
chr3 58400525 58400536 STAT1 JASPAR yes 2694543
chr3 58400525 58400536 STAT1 JASPAR yes 70991431
chr3 58400541 58400554 POU2F2 JASPAR yes 2694544
chr3 58400541 58400554 POU2F2 JASPAR yes 70991432
chr3 58400545 58400560 STAT2 JASPAR yes 2694545
chr3 58400545 58400560 STAT2 JASPAR yes 70991433
chr3 58400551 58400561 HMBOX1 JASPAR yes 2694546
chr3 58400551 58400561 HMBOX1 JASPAR yes 70991434
chr3 58400553 58400556 MYB TRANSFAC yes 2694547
chr3 58400553 58400556 MYB TRANSFAC yes 70991435
chr3 58400554 58400569 HNF1A JASPAR yes 2694548
chr3 58400554 58400569 HNF1A JASPAR yes 70991436
chr3 58400555 58400568 HNF1B JASPAR yes 2694549
chr3 58400555 58400568 HNF1B JASPAR yes 70991437
chr3 58400556 58400568 HNF1B JASPAR yes 2694550
chr3 58400556 58400568 HNF1B JASPAR yes 70991438
chr3 58400560 58400564 YY1 TRANSFAC yes 2694551
chr3 58400560 58400564 YY1 TRANSFAC yes 70991439
chr3 58400560 58400572 POU3F1 JASPAR yes 2694552
chr3 58400560 58400572 POU3F2 JASPAR yes 2694553
chr3 58400560 58400572 POU3F1 JASPAR yes 70991440
chr3 58400560 58400572 POU3F2 JASPAR yes 70991441
chr3 58400567 58400571 YY1 TRANSFAC yes 2694554
chr3 58400567 58400571 YY1 TRANSFAC yes 70991442
chr3 58400567 58400583 RFX5 JASPAR yes 2694555
chr3 58400567 58400583 RFX5 JASPAR yes 70991443
chr3 58400568 58400587 RFX2 JASPAR yes 2694556
chr3 58400568 58400587 RFX2 JASPAR yes 70991444
chr3 58400570 58400585 RFX5 JASPAR yes 2694557
chr3 58400570 58400585 RFX5 JASPAR yes 70991445
chr3 58400586 58400590 YY1 TRANSFAC yes 2694558
chr3 58400586 58400590 YY1 TRANSFAC yes 70991446
chr3 58400602 58400606 YY1 TRANSFAC yes 2694559
chr3 58400602 58400606 YY1 TRANSFAC yes 70991447
chr3 58400607 58400621 EBF1 JASPAR yes 2694560
chr3 58400607 58400621 EBF1 JASPAR yes 70991448
chr3 58400626 58400630 YY1 TRANSFAC yes 2694561
chr3 58400626 58400630 YY1 TRANSFAC yes 70991449
chr3 58400630 58400644 FOXF2 JASPAR yes 2694562
chr3 58400630 58400644 FOXF2 JASPAR yes 70991450
chr3 58400631 58400642 FOXA1 JASPAR yes 2694563
chr3 58400631 58400642 FOXH1 JASPAR yes 2694564
chr3 58400631 58400642 FOXA1 JASPAR yes 70991451
chr3 58400631 58400642 FOXH1 JASPAR yes 70991452
chr3 58400631 58400646 FOXA1 JASPAR yes 2694565
chr3 58400631 58400646 FOXA1 JASPAR yes 70991453
chr3 58400632 58400643 FOXC1 JASPAR yes 2694566
chr3 58400632 58400643 FOXC1 JASPAR yes 70991454
chr3 58400632 58400644 FOXC2 JASPAR yes 2694567
chr3 58400632 58400644 FOXC2 JASPAR yes 70991455
SNP sites on vista41127[chr3:58400417-58400633]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista41127[chr3:58400417-58400633]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 58303341 58303847 + RPP14 ENSG00000255154.3 58303341 0.83 0.84 3800 2924
chr3 58318607 58411748 + PXK ENSG00000168297.11 58318607 0.76 0.99 3801 18190
chr3 58413357 58419584 - PDHB ENSG00000168291.8 58419584 0.55 0.99 3802 81049
chr3 58477841 58488087 + KCTD6 ENSG00000168301.8 58477841 0.81 0.99 3803 22792
Expression level of Genes
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miRNAs possibly regulated by vista41127[chr3:58400417-58400633]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results