EnhancerDB
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  3. vista4114[chr1:181459512-181459699]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4114[chr1:181459512-181459699]
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Tissue distribution of vista4114
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Transcription factor that possibly regulate vista4114[chr1:181459512-181459699]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 181459512 181459527 FOXP1 JASPAR yes 118409260
chr1 181459512 181459533 IRF1 JASPAR yes 118409261
chr1 181459513 181459519 TBP TRANSFAC yes 118409262
chr1 181459513 181459528 FOXP1 JASPAR yes 118409263
chr1 181459514 181459529 FOXP1 JASPAR yes 118409264
chr1 181459522 181459538 E2F2 JASPAR yes 118409265
chr1 181459528 181459543 MEF2C JASPAR yes 118409266
chr1 181459544 181459548 YY1 TRANSFAC yes 118409267
chr1 181459560 181459569 PITX3 JASPAR yes 118409268
chr1 181459560 181459570 GSC2 JASPAR yes 118409269
chr1 181459560 181459570 GSC JASPAR yes 118409270
chr1 181459561 181459569 OTX1 JASPAR yes 118409271
chr1 181459561 181459569 OTX2 JASPAR yes 118409272
chr1 181459561 181459569 RHOXF1 JASPAR yes 118409273
chr1 181459571 181459583 NHLH1 JASPAR yes 118409274
chr1 181459572 181459581 SNAI2 JASPAR yes 118409275
chr1 181459572 181459582 TCF3 JASPAR yes 118409276
chr1 181459572 181459582 TCF4 JASPAR yes 118409277
chr1 181459574 181459583 ZEB1 JASPAR yes 118409278
chr1 181459576 181459581 SP1 TRANSFAC yes 118409279
chr1 181459577 181459587 SP1 JASPAR yes 118409280
chr1 181459580 181459585 SP1 TRANSFAC yes 118409281
chr1 181459599 181459608 HIC2 JASPAR yes 118409282
chr1 181459627 181459637 MAX JASPAR yes 118409283
chr1 181459627 181459638 USF1 JASPAR yes 118409284
chr1 181459627 181459638 USF2 JASPAR yes 118409285
chr1 181459628 181459638 TFE3 JASPAR yes 118409286
chr1 181459628 181459638 TFEB JASPAR yes 118409287
chr1 181459628 181459638 TFEC JASPAR yes 118409288
chr1 181459629 181459636 USF1 JASPAR yes 118409289
chr1 181459630 181459635 MYC TRANSFAC yes 118409290
chr1 181459630 181459635 USF1 TRANSFAC yes 118409291
chr1 181459630 181459635 USF2 TRANSFAC yes 118409292
chr1 181459654 181459667 SMAD2 JASPAR yes 118409293
chr1 181459654 181459669 RFX5 JASPAR yes 118409294
chr1 181459659 181459671 PKNOX2 JASPAR yes 118409295
chr1 181459660 181459670 ID4 JASPAR yes 118409296
chr1 181459660 181459670 TCF3 JASPAR yes 118409297
chr1 181459660 181459670 TCF4 JASPAR yes 118409298
chr1 181459661 181459670 SNAI2 JASPAR yes 118409299
chr1 181459662 181459667 USF2 TRANSFAC yes 118409300
chr1 181459666 181459675 NFIX JASPAR yes 118409301
chr1 181459666 181459676 NFIA JASPAR yes 118409302
chr1 181459668 181459674 NFIC JASPAR yes 118409303
chr1 181459673 181459694 IRF1 JASPAR yes 118409304
chr1 181459674 181459695 IRF1 JASPAR yes 118409305
chr1 181459676 181459691 FOXP1 JASPAR yes 118409306
chr1 181459676 181459697 IRF1 JASPAR yes 118409307
chr1 181459677 181459698 IRF1 JASPAR yes 118409308
chr1 181459678 181459693 FOXP1 JASPAR yes 118409309
chr1 181459679 181459694 FOXP1 JASPAR yes 118409310
chr1 181459680 181459695 FOXP1 JASPAR yes 118409311
chr1 181459681 181459696 FOXP1 JASPAR yes 118409312
chr1 181459682 181459697 FOXP1 JASPAR yes 118409313
chr1 181459683 181459698 FOXP1 JASPAR yes 118409314
chr1 181459684 181459699 FOXP1 JASPAR yes 118409315
SNP sites on vista4114[chr1:181459512-181459699]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 181459525 rs540429845 AAAG A
E2F2 FOXP1 IRF1
770036
chr1 181459535 rs185980293 C T
E2F2 MEF2C
770037
chr1 181459664 rs543581568 A C
ID4 PKNOX2 RFX5 SMAD2 SNAI2 TCF3 TCF4 USF2
770038
chr1 181459679 rs560253685 GT G
FOXP1 IRF1
770039
Genes possibly regulated by vista4114[chr1:181459512-181459699]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 181382238 181777219 + CACNA1E ENSG00000198216.6 181382238 0.98 1.0 1626 22726
Expression level of Genes
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miRNAs possibly regulated by vista4114[chr1:181459512-181459699]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results