EnhancerDB
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  3. vista41160[chr3:59555792-59556170]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41160[chr3:59555792-59556170]
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Tissue distribution of vista41160
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Transcription factor that possibly regulate vista41160[chr3:59555792-59556170]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 59555792 59555810 TP53 JASPAR yes 2751830
chr3 59555792 59555810 TP63 JASPAR yes 2751831
chr3 59555792 59555810 TP73 JASPAR yes 2751832
chr3 59555792 59555810 TP53 JASPAR yes 70992973
chr3 59555792 59555810 TP63 JASPAR yes 70992974
chr3 59555792 59555810 TP73 JASPAR yes 70992975
chr3 59555793 59555808 TP53 JASPAR yes 2751833
chr3 59555793 59555808 TP53 JASPAR yes 70992976
chr3 59555794 59555809 TP53 JASPAR yes 2751834
chr3 59555794 59555809 TP53 JASPAR yes 70992977
chr3 59555795 59555799 NFE TRANSFAC yes 2751835
chr3 59555795 59555799 NFE TRANSFAC yes 70992978
chr3 59555814 59555824 HOXA13 JASPAR yes 2751836
chr3 59555814 59555824 HOXB13 JASPAR yes 2751837
chr3 59555814 59555824 HOXD13 JASPAR yes 2751838
chr3 59555814 59555824 HOXA13 JASPAR yes 70992979
chr3 59555814 59555824 HOXB13 JASPAR yes 70992980
chr3 59555814 59555824 HOXD13 JASPAR yes 70992981
chr3 59555814 59555825 HOXC13 JASPAR yes 2751839
chr3 59555814 59555825 HOXC13 JASPAR yes 70992982
chr3 59555818 59555822 TEAD2 TRANSFAC yes 2751840
chr3 59555818 59555822 TEAD2 TRANSFAC yes 70992983
chr3 59555831 59555841 NEUROG2 JASPAR yes 2751841
chr3 59555831 59555841 NEUROG2 JASPAR yes 70992984
chr3 59555833 59555837 YY1 TRANSFAC yes 2751842
chr3 59555833 59555837 YY1 TRANSFAC yes 70992985
chr3 59555846 59555866 PPARG JASPAR yes 2751843
chr3 59555846 59555866 PPARG JASPAR yes 70992986
chr3 59555852 59555867 JUND JASPAR yes 2751844
chr3 59555852 59555867 JUND JASPAR yes 70992987
chr3 59555853 59555866 JUN JASPAR yes 2751845
chr3 59555853 59555866 JUN JASPAR yes 70992988
chr3 59555854 59555868 ATF7 JASPAR yes 2751846
chr3 59555854 59555868 ATF7 JASPAR yes 70992989
chr3 59555855 59555867 JDP2 JASPAR yes 2751847
chr3 59555855 59555867 JDP2 JASPAR yes 70992990
chr3 59555855 59555870 JUND JASPAR yes 2751848
chr3 59555855 59555870 JUND JASPAR yes 70992991
chr3 59555856 59555869 JUN JASPAR yes 2751849
chr3 59555856 59555869 JUN JASPAR yes 70992992
chr3 59555857 59555865 CREB1 JASPAR yes 2751850
chr3 59555857 59555865 CREB1 JASPAR yes 70992993
chr3 59555868 59555871 MYB TRANSFAC yes 2751851
chr3 59555868 59555871 MYB TRANSFAC yes 70992994
chr3 59555894 59555898 YY1 TRANSFAC yes 2751852
chr3 59555894 59555898 YY1 TRANSFAC yes 70992995
chr3 59555894 59555912 SRF JASPAR yes 2751853
chr3 59555894 59555912 SRF JASPAR yes 70992996
chr3 59555896 59555912 SRF JASPAR yes 2751854
chr3 59555896 59555912 SRF JASPAR yes 70992997
chr3 59555896 59555914 SRF JASPAR yes 2751855
chr3 59555896 59555914 SRF JASPAR yes 70992998
chr3 59555897 59555909 SRF JASPAR yes 2751856
chr3 59555897 59555909 SRF JASPAR yes 70992999
chr3 59555899 59555911 SRF JASPAR yes 2751857
chr3 59555899 59555911 SRF JASPAR yes 70993000
chr3 59555902 59555912 RORA JASPAR yes 2751858
chr3 59555902 59555912 RORA JASPAR yes 70993001
chr3 59555905 59555913 NR4A2 JASPAR yes 2751859
chr3 59555905 59555913 NR4A2 JASPAR yes 70993002
chr3 59555907 59555911 ESR1 TRANSFAC yes 2751860
chr3 59555907 59555911 ESR1 TRANSFAC yes 70993003
chr3 59555910 59555920 TEAD1 JASPAR yes 2751861
chr3 59555910 59555920 TEAD4 JASPAR yes 2751862
chr3 59555910 59555920 TEAD1 JASPAR yes 70993004
chr3 59555910 59555920 TEAD4 JASPAR yes 70993005
chr3 59555910 59555922 TEAD1 JASPAR yes 2751863
chr3 59555910 59555922 TEAD1 JASPAR yes 70993006
chr3 59555911 59555919 TEAD3 JASPAR yes 2751864
chr3 59555911 59555919 TEAD3 JASPAR yes 70993007
chr3 59555945 59555949 YY1 TRANSFAC yes 2751865
chr3 59555945 59555949 YY1 TRANSFAC yes 70993008
chr3 59555947 59555961 E2F7 JASPAR yes 2751866
chr3 59555947 59555961 E2F7 JASPAR yes 70993009
chr3 59555948 59555956 E2F1 JASPAR yes 2751867
chr3 59555948 59555956 E2F1 JASPAR yes 70993010
chr3 59555948 59555960 E2F8 JASPAR yes 2751868
chr3 59555948 59555960 E2F8 JASPAR yes 70993011
chr3 59555951 59555956 SP1 TRANSFAC yes 2751869
chr3 59555951 59555956 SP1 TRANSFAC yes 70993012
chr3 59555951 59555957 SP1 TRANSFAC yes 2751870
chr3 59555951 59555957 SP1 TRANSFAC yes 70993013
chr3 59555954 59555964 SP1 JASPAR yes 2751871
chr3 59555954 59555964 SP1 JASPAR yes 70993014
chr3 59555957 59555967 SP1 JASPAR yes 2751872
chr3 59555957 59555967 SP1 JASPAR yes 70993015
chr3 59555958 59555965 CEBPA TRANSFAC yes 2751873
chr3 59555958 59555965 CEBPA TRANSFAC yes 70993016
chr3 59556033 59556054 REST JASPAR yes 2751874
chr3 59556033 59556054 REST JASPAR yes 70993017
chr3 59556034 59556053 REST JASPAR yes 2751875
chr3 59556034 59556053 REST JASPAR yes 70993018
chr3 59556050 59556055 ETS2 TRANSFAC yes 2751876
chr3 59556050 59556055 ETS2 TRANSFAC yes 70993019
chr3 59556106 59556116 GABPA JASPAR yes 2751877
chr3 59556106 59556116 GABPA JASPAR yes 70993020
chr3 59556108 59556114 ETS1 JASPAR yes 2751878
chr3 59556108 59556114 SPI1 JASPAR yes 2751879
chr3 59556108 59556114 ETS1 JASPAR yes 70993021
chr3 59556108 59556114 SPI1 JASPAR yes 70993022
chr3 59556139 59556150 DMRT3 JASPAR yes 2751880
chr3 59556139 59556150 DMRT3 JASPAR yes 70993023
chr3 59556146 59556151 MYC TRANSFAC yes 2751881
chr3 59556146 59556151 MYC TRANSFAC yes 70993024
chr3 59556161 59556169 GATA3 JASPAR yes 2751882
chr3 59556161 59556169 GATA3 JASPAR yes 70993025
SNP sites on vista41160[chr3:59555792-59556170]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 59555811 rs116289576 T A no 6767967
chr3 59555846 rs375874648 C G
PPARG
6767968
chr3 59555867 rs553197804 C T
ATF7 JDP2 JUN JUND
6767969
chr3 59555955 rs115473907 G A
E2F1 E2F7 E2F8 SP1
6767970
chr3 59555975 rs546626140 C T no 6767971
chr3 59556073 rs185783565 C A no 6767972
chr3 59556099 rs566728243 C G no 6767973
chr3 59556154 rs569193624 C G no 6767974
chr3 59556157 rs576662940 G A no 6767975
Genes possibly regulated by vista41160[chr3:59555792-59556170]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista41160[chr3:59555792-59556170]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results