EnhancerDB
  1. Home
  2. Enhancers
  3. vista414[chr1:12609717-12610039]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista414[chr1:12609717-12610039]
Back to top
Tissue distribution of vista414
Back to top
Transcription factor that possibly regulate vista414[chr1:12609717-12610039]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12609724 12609738 GLIS2 JASPAR yes 26832606
chr1 12609724 12609738 ZIC1 JASPAR yes 26832607
chr1 12609724 12609738 GLIS2 JASPAR yes 118233469
chr1 12609724 12609738 ZIC1 JASPAR yes 118233470
chr1 12609726 12609746 RREB1 JASPAR yes 26832608
chr1 12609726 12609746 RREB1 JASPAR yes 118233471
chr1 12609737 12609742 SP1 TRANSFAC yes 26832609
chr1 12609737 12609742 SP1 TRANSFAC yes 118233472
chr1 12609737 12609743 SP1 TRANSFAC yes 26832610
chr1 12609737 12609743 SP1 TRANSFAC yes 118233473
chr1 12609747 12609760 ELF1 JASPAR yes 26832611
chr1 12609747 12609760 ELF1 JASPAR yes 118233474
chr1 12609748 12609755 SPI1 JASPAR yes 26832612
chr1 12609748 12609755 SPI1 JASPAR yes 118233475
chr1 12609748 12609756 FEV JASPAR yes 26832613
chr1 12609748 12609756 FEV JASPAR yes 118233476
chr1 12609750 12609755 ETS2 TRANSFAC yes 26832614
chr1 12609750 12609755 ETS2 TRANSFAC yes 118233477
chr1 12609783 12609803 ESR1 JASPAR yes 26832615
chr1 12609783 12609803 ESR1 JASPAR yes 118233478
chr1 12609785 12609796 ESRRA JASPAR yes 26832616
chr1 12609785 12609796 ESRRA JASPAR yes 118233479
chr1 12609786 12609804 ESR1 JASPAR yes 26832617
chr1 12609786 12609804 ESR2 JASPAR yes 26832618
chr1 12609786 12609804 ESR1 JASPAR yes 118233480
chr1 12609786 12609804 ESR2 JASPAR yes 118233481
chr1 12609786 12609806 PPARG JASPAR yes 26832619
chr1 12609786 12609806 PPARG JASPAR yes 118233482
chr1 12609787 12609804 ESR1 JASPAR yes 26832620
chr1 12609787 12609804 ESR1 JASPAR yes 118233483
chr1 12609787 12609805 ESR1 JASPAR yes 26832621
chr1 12609787 12609805 ESR2 JASPAR yes 26832622
chr1 12609787 12609805 ESR1 JASPAR yes 118233484
chr1 12609787 12609805 ESR2 JASPAR yes 118233485
chr1 12609788 12609803 ESR2 JASPAR yes 26832623
chr1 12609788 12609803 ESR2 JASPAR yes 118233486
chr1 12609788 12609808 ESR1 JASPAR yes 26832624
chr1 12609788 12609808 ESR1 JASPAR yes 118233487
chr1 12609789 12609793 ESR1 TRANSFAC yes 26832625
chr1 12609789 12609793 ESR1 TRANSFAC yes 118233488
chr1 12609806 12609818 NHLH1 JASPAR yes 26832626
chr1 12609806 12609818 NHLH1 JASPAR yes 118233489
chr1 12609807 12609817 NHLH1 JASPAR yes 26832627
chr1 12609807 12609817 NHLH1 JASPAR yes 118233490
chr1 12609831 12609852 IRF1 JASPAR yes 26832628
chr1 12609831 12609852 IRF1 JASPAR yes 118233491
chr1 12609832 12609853 ZNF263 JASPAR yes 26832629
chr1 12609832 12609853 ZNF263 JASPAR yes 118233492
chr1 12609839 12609860 IRF1 JASPAR yes 26832630
chr1 12609839 12609860 IRF1 JASPAR yes 118233493
chr1 12609841 12609856 PRDM1 JASPAR yes 26832631
chr1 12609841 12609856 PRDM1 JASPAR yes 118233494
chr1 12609844 12609854 TBX21 JASPAR yes 26832632
chr1 12609844 12609854 TBX21 JASPAR yes 118233495
chr1 12609847 12609862 STAT2 JASPAR yes 26832633
chr1 12609847 12609862 STAT2 JASPAR yes 118233496
chr1 12609864 12609869 MYB TRANSFAC yes 26832634
chr1 12609864 12609869 MYB TRANSFAC yes 118233497
chr1 12609869 12609887 SRF JASPAR yes 26832635
chr1 12609869 12609887 SRF JASPAR yes 118233498
chr1 12609876 12609886 NFIA JASPAR yes 26832636
chr1 12609876 12609886 NFIA JASPAR yes 118233499
chr1 12609877 12609886 NFIX JASPAR yes 26832637
chr1 12609877 12609886 NFIX JASPAR yes 118233500
chr1 12609878 12609884 NFIC JASPAR yes 26832638
chr1 12609878 12609884 NFIC JASPAR yes 118233501
chr1 12609886 12609890 TEAD2 TRANSFAC yes 26832639
chr1 12609886 12609890 TEAD2 TRANSFAC yes 118233502
chr1 12609886 12609891 TBP TRANSFAC yes 26832640
chr1 12609886 12609891 TBP TRANSFAC yes 118233503
chr1 12609886 12609892 TFIID TRANSFAC yes 26832641
chr1 12609886 12609892 TFIID TRANSFAC yes 118233504
chr1 12609895 12609899 YY1 TRANSFAC yes 26832642
chr1 12609895 12609899 YY1 TRANSFAC yes 118233505
chr1 12609903 12609909 NFIC JASPAR yes 26832643
chr1 12609903 12609909 NFIC JASPAR yes 118233506
chr1 12609904 12609916 PKNOX2 JASPAR yes 26832644
chr1 12609904 12609916 PKNOX2 JASPAR yes 118233507
chr1 12609914 12609925 FOXA1 JASPAR yes 26832645
chr1 12609914 12609925 FOXA1 JASPAR yes 118233508
chr1 12609915 12609925 NFATC3 JASPAR yes 26832646
chr1 12609915 12609925 NFATC3 JASPAR yes 118233509
chr1 12609917 12609925 FOXO3 JASPAR yes 26832647
chr1 12609917 12609925 FOXO3 JASPAR yes 118233510
chr1 12609920 12609926 HiNF-A TRANSFAC yes 26832648
chr1 12609920 12609926 HiNF-A TRANSFAC yes 118233511
chr1 12609924 12609930 SOX10 JASPAR yes 26832649
chr1 12609924 12609930 SOX10 JASPAR yes 118233512
chr1 12609928 12609934 GATA3 JASPAR yes 26832650
chr1 12609928 12609934 GATA3 JASPAR yes 118233513
chr1 12609934 12609940 SOX10 JASPAR yes 26832651
chr1 12609934 12609940 SOX10 JASPAR yes 118233514
chr1 12609936 12609950 JUN JASPAR yes 26832652
chr1 12609936 12609950 JUN JASPAR yes 118233515
chr1 12609940 12609951 FOS JASPAR yes 26832653
chr1 12609940 12609951 FOSL1 JASPAR yes 26832654
chr1 12609940 12609951 JUND JASPAR yes 26832655
chr1 12609940 12609951 NFE2 JASPAR yes 26832656
chr1 12609940 12609951 FOS JASPAR yes 118233516
chr1 12609940 12609951 FOSL1 JASPAR yes 118233517
chr1 12609940 12609951 JUND JASPAR yes 118233518
chr1 12609940 12609951 NFE2 JASPAR yes 118233519
chr1 12609941 12609952 FOSL2 JASPAR yes 26832657
chr1 12609941 12609952 JUNB JASPAR yes 26832658
chr1 12609941 12609952 FOSL2 JASPAR yes 118233520
chr1 12609941 12609952 JUNB JASPAR yes 118233521
chr1 12609941 12609955 JUN JASPAR yes 26832659
chr1 12609941 12609955 JUN JASPAR yes 118233522
chr1 12609942 12609948 JUN TRANSFAC yes 26832660
chr1 12609942 12609948 JUN TRANSFAC yes 118233523
chr1 12609945 12609955 SREBF2 JASPAR yes 26832661
chr1 12609945 12609955 SREBF2 JASPAR yes 118233524
chr1 12609960 12609969 SP1 TRANSFAC yes 26832662
chr1 12609960 12609969 SP1 TRANSFAC yes 118233525
chr1 12609961 12609967 SP1 TRANSFAC yes 26832663
chr1 12609961 12609967 SP1 TRANSFAC yes 118233526
chr1 12609961 12609971 SP1 JASPAR yes 26832664
chr1 12609961 12609971 SP1 JASPAR yes 118233527
chr1 12609962 12609969 SP1 TRANSFAC yes 26832665
chr1 12609962 12609969 SP1 TRANSFAC yes 118233528
chr1 12609963 12609968 SP1 TRANSFAC yes 26832666
chr1 12609963 12609968 SP1 TRANSFAC yes 118233529
chr1 12609963 12609969 SP1 TRANSFAC yes 26832667
chr1 12609963 12609969 SP1 TRANSFAC yes 118233530
chr1 12609963 12609970 SP1 TRANSFAC yes 26832668
chr1 12609963 12609970 SP1 TRANSFAC yes 118233531
chr1 12609976 12609986 SREBF2 JASPAR yes 26832669
chr1 12609976 12609986 SREBF2 JASPAR yes 118233532
chr1 12609976 12609987 USF1 JASPAR yes 26832670
chr1 12609976 12609987 USF2 JASPAR yes 26832671
chr1 12609976 12609987 USF1 JASPAR yes 118233533
chr1 12609976 12609987 USF2 JASPAR yes 118233534
chr1 12609978 12609991 NR2F1 JASPAR yes 26832672
chr1 12609978 12609991 NR2F1 JASPAR yes 118233535
chr1 12609980 12609991 ESRRA JASPAR yes 26832673
chr1 12609980 12609991 ESRRA JASPAR yes 118233536
chr1 12609981 12609989 NR4A2 JASPAR yes 26832674
chr1 12609981 12609989 NR4A2 JASPAR yes 118233537
chr1 12609982 12609992 RORA JASPAR yes 26832675
chr1 12609982 12609992 RORA JASPAR yes 118233538
chr1 12609994 12610012 ESR1 JASPAR yes 26832676
chr1 12609994 12610012 ESR1 JASPAR yes 118233539
chr1 12610031 12610041 ID4 JASPAR yes 26832677
chr1 12610031 12610041 ID4 JASPAR yes 118233540
chr1 12610033 12610038 USF2 TRANSFAC yes 26832678
chr1 12610033 12610038 USF2 TRANSFAC yes 118233541
SNP sites on vista414[chr1:12609717-12610039]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12609741 rs6690281 G A
RREB1 SP1
86703
chr1 12609780 rs182104361 G A no 86704
chr1 12609796 rs141239856 T A
ESR1 ESR2 ESRRA PPARG
86705
chr1 12609942 rs531778394 G A
FOS FOSL1 FOSL2 JUN JUNB JUND NFE2
86706
chr1 12609973 rs76589131 A G no 86707
Genes possibly regulated by vista414[chr1:12609717-12610039]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12627939 12677737 - DHRS3 ENSG00000162496.4 12677737 0.85 1.0 169 32302
chr1 12704566 12727097 + AADACL4 ENSG00000204518.2 12704566 0.97 0.98 170 5473
Expression level of Genes
Back to top
miRNAs possibly regulated by vista414[chr1:12609717-12610039]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results