EnhancerDB
  1. Home
  2. Enhancers
  3. vista416[chr1:12616547-12616769]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista416[chr1:12616547-12616769]
Back to top
Tissue distribution of vista416
Back to top
Transcription factor that possibly regulate vista416[chr1:12616547-12616769]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12616550 12616559 HIC2 JASPAR yes 26833599
chr1 12616550 12616559 HIC2 JASPAR yes 118233577
chr1 12616560 12616575 TFAP2C JASPAR yes 26833600
chr1 12616560 12616575 TFAP2C JASPAR yes 118233578
chr1 12616560 12616579 REST JASPAR yes 26833601
chr1 12616560 12616579 REST JASPAR yes 118233579
chr1 12616562 12616577 TFAP2A JASPAR yes 26833602
chr1 12616562 12616577 TFAP2A JASPAR yes 118233580
chr1 12616563 12616574 TFAP2A JASPAR yes 26833603
chr1 12616563 12616574 TFAP2B JASPAR yes 26833604
chr1 12616563 12616574 TFAP2C JASPAR yes 26833605
chr1 12616563 12616574 TFAP2A JASPAR yes 118233581
chr1 12616563 12616574 TFAP2B JASPAR yes 118233582
chr1 12616563 12616574 TFAP2C JASPAR yes 118233583
chr1 12616564 12616573 TFAP2A JASPAR yes 26833606
chr1 12616564 12616573 TFAP2A JASPAR yes 118233584
chr1 12616580 12616589 THAP1 JASPAR yes 26833607
chr1 12616580 12616589 THAP1 JASPAR yes 118233585
chr1 12616580 12616595 RUNX2 JASPAR yes 26833608
chr1 12616580 12616595 RUNX2 JASPAR yes 118233586
chr1 12616581 12616597 ZNF143 JASPAR yes 26833609
chr1 12616581 12616597 ZNF143 JASPAR yes 118233587
chr1 12616594 12616607 NR2F1 JASPAR yes 26833610
chr1 12616594 12616607 NR2F1 JASPAR yes 118233588
chr1 12616596 12616607 ESRRA JASPAR yes 26833611
chr1 12616596 12616607 ESRRB JASPAR yes 26833612
chr1 12616596 12616607 ESRRA JASPAR yes 118233589
chr1 12616596 12616607 ESRRB JASPAR yes 118233590
chr1 12616597 12616605 NR4A2 JASPAR yes 26833613
chr1 12616597 12616605 NR4A2 JASPAR yes 118233591
chr1 12616618 12616629 NFIL3 JASPAR yes 26833614
chr1 12616618 12616629 NFIL3 JASPAR yes 118233592
chr1 12616619 12616631 DBP JASPAR yes 26833615
chr1 12616619 12616631 HLF JASPAR yes 26833616
chr1 12616619 12616631 TEF JASPAR yes 26833617
chr1 12616619 12616631 DBP JASPAR yes 118233593
chr1 12616619 12616631 HLF JASPAR yes 118233594
chr1 12616619 12616631 TEF JASPAR yes 118233595
chr1 12616620 12616633 JUN JASPAR yes 26833618
chr1 12616620 12616633 JUN JASPAR yes 118233596
chr1 12616642 12616647 ETS2 TRANSFAC yes 26833619
chr1 12616642 12616647 ETS2 TRANSFAC yes 118233597
chr1 12616649 12616655 HiNF-A TRANSFAC yes 26833620
chr1 12616649 12616655 HiNF-A TRANSFAC yes 118233598
chr1 12616679 12616683 YY1 TRANSFAC yes 26833621
chr1 12616679 12616683 YY1 TRANSFAC yes 118233599
chr1 12616699 12616720 IRF1 JASPAR yes 26833622
chr1 12616699 12616720 IRF1 JASPAR yes 118233600
chr1 12616703 12616718 PRDM1 JASPAR yes 26833623
chr1 12616703 12616718 STAT2 JASPAR yes 26833624
chr1 12616703 12616718 PRDM1 JASPAR yes 118233601
chr1 12616703 12616718 STAT2 JASPAR yes 118233602
chr1 12616703 12616721 IRF2 JASPAR yes 26833625
chr1 12616703 12616721 IRF2 JASPAR yes 118233603
chr1 12616704 12616710 HiNF-A TRANSFAC yes 26833626
chr1 12616704 12616710 HiNF-A TRANSFAC yes 118233604
chr1 12616704 12616716 IRF1 JASPAR yes 26833627
chr1 12616704 12616716 IRF1 JASPAR yes 118233605
chr1 12616704 12616718 TCF7L2 JASPAR yes 26833628
chr1 12616704 12616718 TCF7L2 JASPAR yes 118233606
chr1 12616704 12616719 LEF1 JASPAR yes 26833629
chr1 12616704 12616719 LEF1 JASPAR yes 118233607
chr1 12616708 12616714 TCF4 TRANSFAC yes 26833630
chr1 12616708 12616714 TCF4 TRANSFAC yes 118233608
chr1 12616712 12616717 ETS2 TRANSFAC yes 26833631
chr1 12616712 12616717 ETS2 TRANSFAC yes 118233609
chr1 12616716 12616730 GATA2 JASPAR yes 26833632
chr1 12616716 12616730 GATA2 JASPAR yes 118233610
chr1 12616718 12616724 GATA1 TRANSFAC yes 26833633
chr1 12616718 12616724 GATA1 TRANSFAC yes 118233611
chr1 12616718 12616726 GATA5 JASPAR yes 26833634
chr1 12616718 12616726 GATA5 JASPAR yes 118233612
chr1 12616723 12616738 RUNX2 JASPAR yes 26833635
chr1 12616723 12616738 RUNX2 JASPAR yes 118233613
chr1 12616737 12616747 MZF1 JASPAR yes 26833636
chr1 12616737 12616747 MZF1 JASPAR yes 118233614
chr1 12616743 12616748 ETS2 TRANSFAC yes 26833637
chr1 12616743 12616748 ETS2 TRANSFAC yes 118233615
chr1 12616751 12616766 HSF1 JASPAR yes 26833638
chr1 12616751 12616766 HSF1 JASPAR yes 118233616
chr1 12616753 12616763 NFATC3 JASPAR yes 26833639
chr1 12616753 12616763 NFATC3 JASPAR yes 118233617
chr1 12616755 12616762 NFATC2 JASPAR yes 26833640
chr1 12616755 12616762 NFATC2 JASPAR yes 118233618
chr1 12616758 12616774 SOX8 JASPAR yes 26833641
chr1 12616758 12616774 SOX8 JASPAR yes 118233619
SNP sites on vista416[chr1:12616547-12616769]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12616675 rs535173963 C T no 86849
chr1 12616676 rs186493994 G A no 86850
chr1 12616741 rs190409578 G A,C
MZF1
86851
chr1 12616742 rs148714560 G A,C,T
MZF1
86852
Genes possibly regulated by vista416[chr1:12616547-12616769]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12627939 12677737 - DHRS3 ENSG00000162496.4 12677737 0.85 1.0 169 39032
chr1 12704566 12727097 + AADACL4 ENSG00000204518.2 12704566 0.97 0.98 170 12203
Expression level of Genes
Back to top
miRNAs possibly regulated by vista416[chr1:12616547-12616769]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results