EnhancerDB
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  3. vista417[chr1:12674513-12674729]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista417[chr1:12674513-12674729]
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Tissue distribution of vista417
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Transcription factor that possibly regulate vista417[chr1:12674513-12674729]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12674515 12674530 FOXP1 JASPAR yes 26839655
chr1 12674515 12674530 FOXP1 JASPAR yes 118233620
chr1 12674516 12674531 FOXP1 JASPAR yes 26839656
chr1 12674516 12674531 FOXP1 JASPAR yes 118233621
chr1 12674517 12674523 TBP TRANSFAC yes 26839657
chr1 12674517 12674523 TBP TRANSFAC yes 118233622
chr1 12674517 12674532 FOXP1 JASPAR yes 26839658
chr1 12674517 12674532 FOXP1 JASPAR yes 118233623
chr1 12674520 12674535 STAT2 JASPAR yes 26839659
chr1 12674520 12674535 STAT2 JASPAR yes 118233624
chr1 12674534 12674546 SRF JASPAR yes 26839660
chr1 12674534 12674546 SRF JASPAR yes 118233625
chr1 12674536 12674548 SRF JASPAR yes 26839661
chr1 12674536 12674548 SRF JASPAR yes 118233626
chr1 12674539 12674543 YY1 TRANSFAC yes 26839662
chr1 12674539 12674543 YY1 TRANSFAC yes 118233627
chr1 12674547 12674561 PLAG1 JASPAR yes 26839663
chr1 12674547 12674561 RXRB JASPAR yes 26839664
chr1 12674547 12674561 RXRG JASPAR yes 26839665
chr1 12674547 12674561 PLAG1 JASPAR yes 118233628
chr1 12674547 12674561 RXRB JASPAR yes 118233629
chr1 12674547 12674561 RXRG JASPAR yes 118233630
chr1 12674547 12674562 NR2C2 JASPAR yes 26839666
chr1 12674547 12674562 NR2C2 JASPAR yes 118233631
chr1 12674556 12674568 TFAP2A JASPAR yes 26839667
chr1 12674556 12674568 TFAP2B JASPAR yes 26839668
chr1 12674556 12674568 TFAP2A JASPAR yes 118233632
chr1 12674556 12674568 TFAP2B JASPAR yes 118233633
chr1 12674557 12674568 TFAP2B JASPAR yes 26839669
chr1 12674557 12674568 TFAP2C JASPAR yes 26839670
chr1 12674557 12674568 TFAP2B JASPAR yes 118233634
chr1 12674557 12674568 TFAP2C JASPAR yes 118233635
chr1 12674569 12674581 ZBTB7C JASPAR yes 26839671
chr1 12674569 12674581 ZBTB7C JASPAR yes 118233636
chr1 12674570 12674590 RREB1 JASPAR yes 26839672
chr1 12674570 12674590 RREB1 JASPAR yes 118233637
chr1 12674571 12674585 GLIS3 JASPAR yes 26839673
chr1 12674571 12674585 GLIS3 JASPAR yes 118233638
chr1 12674584 12674595 CEBPB JASPAR yes 26839674
chr1 12674584 12674595 CEBPB JASPAR yes 118233639
chr1 12674585 12674595 NFIA JASPAR yes 26839675
chr1 12674585 12674595 NFIA JASPAR yes 118233640
chr1 12674585 12674596 CEBPA JASPAR yes 26839676
chr1 12674585 12674596 CEBPA JASPAR yes 118233641
chr1 12674587 12674593 NFIC JASPAR yes 26839677
chr1 12674587 12674593 NFIC JASPAR yes 118233642
chr1 12674597 12674601 YY1 TRANSFAC yes 26839678
chr1 12674597 12674601 YY1 TRANSFAC yes 118233643
chr1 12674601 12674604 MYB TRANSFAC yes 26839679
chr1 12674601 12674604 MYB TRANSFAC yes 118233644
chr1 12674604 12674614 RORA JASPAR yes 26839680
chr1 12674604 12674614 RORA JASPAR yes 118233645
chr1 12674605 12674616 ESRRA JASPAR yes 26839681
chr1 12674605 12674616 ESRRB JASPAR yes 26839682
chr1 12674605 12674616 ESRRA JASPAR yes 118233646
chr1 12674605 12674616 ESRRB JASPAR yes 118233647
chr1 12674608 12674618 POU6F2 JASPAR yes 26839683
chr1 12674608 12674618 POU6F2 JASPAR yes 118233648
chr1 12674609 12674613 ESR1 TRANSFAC yes 26839684
chr1 12674609 12674613 ESR1 TRANSFAC yes 118233649
chr1 12674609 12674626 ZNF410 JASPAR yes 26839685
chr1 12674609 12674626 ZNF410 JASPAR yes 118233650
chr1 12674612 12674616 YY1 TRANSFAC yes 26839686
chr1 12674612 12674616 YY1 TRANSFAC yes 118233651
chr1 12674613 12674624 STAT1 JASPAR yes 26839687
chr1 12674613 12674624 STAT1 JASPAR yes 118233652
chr1 12674630 12674651 ZNF263 JASPAR yes 26839688
chr1 12674630 12674651 ZNF263 JASPAR yes 118233653
chr1 12674638 12674649 E2F6 JASPAR yes 26839689
chr1 12674638 12674649 E2F6 JASPAR yes 118233654
chr1 12674650 12674664 FOXF2 JASPAR yes 26839690
chr1 12674650 12674664 FOXF2 JASPAR yes 118233655
chr1 12674650 12674665 FOXP1 JASPAR yes 26839691
chr1 12674650 12674665 FOXP1 JASPAR yes 118233656
chr1 12674651 12674662 FOXH1 JASPAR yes 26839692
chr1 12674651 12674662 FOXH1 JASPAR yes 118233657
chr1 12674653 12674664 FOXP2 JASPAR yes 26839693
chr1 12674653 12674664 FOXP2 JASPAR yes 118233658
chr1 12674653 12674665 FOXI1 JASPAR yes 26839694
chr1 12674653 12674665 FOXI1 JASPAR yes 118233659
chr1 12674664 12674667 MYB TRANSFAC yes 26839695
chr1 12674664 12674667 MYB TRANSFAC yes 118233660
chr1 12674670 12674684 XBP1 JASPAR yes 26839696
chr1 12674670 12674684 XBP1 JASPAR yes 118233661
chr1 12674671 12674685 CREB3 JASPAR yes 26839697
chr1 12674671 12674685 CREB3L1 JASPAR yes 26839698
chr1 12674671 12674685 CREB3 JASPAR yes 118233662
chr1 12674671 12674685 CREB3L1 JASPAR yes 118233663
chr1 12674676 12674681 ATF1 TRANSFAC yes 26839699
chr1 12674676 12674681 ATF1 TRANSFAC yes 118233664
chr1 12674679 12674698 REST JASPAR yes 26839700
chr1 12674679 12674698 REST JASPAR yes 118233665
chr1 12674701 12674722 IRF1 JASPAR yes 26839701
chr1 12674701 12674722 IRF1 JASPAR yes 118233666
chr1 12674703 12674718 PRDM1 JASPAR yes 26839702
chr1 12674703 12674718 STAT2 JASPAR yes 26839703
chr1 12674703 12674718 PRDM1 JASPAR yes 118233667
chr1 12674703 12674718 STAT2 JASPAR yes 118233668
chr1 12674704 12674725 IRF1 JASPAR yes 26839704
chr1 12674704 12674725 IRF1 JASPAR yes 118233669
chr1 12674705 12674726 IRF1 JASPAR yes 26839705
chr1 12674705 12674726 IRF1 JASPAR yes 118233670
chr1 12674706 12674721 FOXP1 JASPAR yes 26839706
chr1 12674706 12674721 FOXP1 JASPAR yes 118233671
chr1 12674706 12674727 IRF1 JASPAR yes 26839707
chr1 12674706 12674727 IRF1 JASPAR yes 118233672
chr1 12674707 12674722 FOXP1 JASPAR yes 26839708
chr1 12674707 12674722 FOXP1 JASPAR yes 118233673
chr1 12674707 12674728 IRF1 JASPAR yes 26839709
chr1 12674707 12674728 IRF1 JASPAR yes 118233674
chr1 12674708 12674723 FOXP1 JASPAR yes 26839710
chr1 12674708 12674723 FOXP1 JASPAR yes 118233675
chr1 12674709 12674724 FOXP1 JASPAR yes 26839711
chr1 12674709 12674724 FOXP1 JASPAR yes 118233676
chr1 12674710 12674725 FOXP1 JASPAR yes 26839712
chr1 12674710 12674725 FOXP1 JASPAR yes 118233677
chr1 12674710 12674731 IRF1 JASPAR yes 26839713
chr1 12674710 12674731 IRF1 JASPAR yes 118233678
chr1 12674711 12674726 FOXP1 JASPAR yes 26839714
chr1 12674711 12674726 FOXP1 JASPAR yes 118233679
chr1 12674711 12674732 IRF1 JASPAR yes 26839715
chr1 12674711 12674732 IRF1 JASPAR yes 118233680
chr1 12674712 12674727 FOXP1 JASPAR yes 26839716
chr1 12674712 12674727 FOXP1 JASPAR yes 118233681
chr1 12674713 12674728 FOXP1 JASPAR yes 26839717
chr1 12674713 12674728 FOXP1 JASPAR yes 118233682
chr1 12674714 12674729 FOXP1 JASPAR yes 26839718
chr1 12674714 12674729 FOXP1 JASPAR yes 118233683
chr1 12674719 12674734 FOXP1 JASPAR yes 26839719
chr1 12674719 12674734 FOXP1 JASPAR yes 118233684
chr1 12674729 12674741 INSM1 JASPAR yes 26839720
chr1 12674729 12674741 INSM1 JASPAR yes 118233685
SNP sites on vista417[chr1:12674513-12674729]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12674518 rs59203914 TA T
FOXP1 TBP
87527
chr1 12674518 rs796733108 TA T
FOXP1 TBP
87528
chr1 12674661 rs114329714 C T
FOXF2 FOXH1 FOXI1 FOXP1 FOXP2
87529
chr1 12674684 rs114886727 C G
CREB3 CREB3L1 REST XBP1
87530
Genes possibly regulated by vista417[chr1:12674513-12674729]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12627939 12677737 - DHRS3 ENSG00000162496.4 12677737 0.85 1.0 169 96992
chr1 12704566 12727097 + AADACL4 ENSG00000204518.2 12704566 0.97 0.98 170 70163
Expression level of Genes
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miRNAs possibly regulated by vista417[chr1:12674513-12674729]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results