EnhancerDB
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  3. vista4171[chr1:183436030-183436225]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4171[chr1:183436030-183436225]
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Tissue distribution of vista4171
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Transcription factor that possibly regulate vista4171[chr1:183436030-183436225]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 183436034 183436040 SOX10 JASPAR yes 118412252
chr1 183436035 183436049 SPI1 JASPAR yes 118412253
chr1 183436036 183436049 ELF1 JASPAR yes 118412254
chr1 183436037 183436049 EHF JASPAR yes 118412255
chr1 183436037 183436050 ELF3 JASPAR yes 118412256
chr1 183436038 183436049 ELF5 JASPAR yes 118412257
chr1 183436039 183436045 PEA3 TRANSFAC yes 118412258
chr1 183436039 183436049 ETV6 JASPAR yes 118412259
chr1 183436040 183436048 EHF JASPAR yes 118412260
chr1 183436041 183436048 SPI1 JASPAR yes 118412261
chr1 183436099 183436114 ZIC4 JASPAR yes 118412262
chr1 183436100 183436114 ZIC1 JASPAR yes 118412263
chr1 183436109 183436122 NFKB1 JASPAR yes 118412264
chr1 183436109 183436122 NFKB2 JASPAR yes 118412265
chr1 183436116 183436126 ZNF740 JASPAR yes 118412266
chr1 183436117 183436127 GCM2 JASPAR yes 118412267
chr1 183436122 183436137 NFYB JASPAR yes 118412268
chr1 183436122 183436140 RARA JASPAR yes 118412269
chr1 183436124 183436137 DUXA JASPAR yes 118412270
chr1 183436124 183436140 NFYA JASPAR yes 118412271
chr1 183436125 183436136 DUX4 JASPAR yes 118412272
chr1 183436125 183436143 NFYA JASPAR yes 118412273
chr1 183436129 183436133 H1TF2 TRANSFAC yes 118412274
chr1 183436129 183436133 NFE TRANSFAC yes 118412275
chr1 183436129 183436133 SRF TRANSFAC yes 118412276
chr1 183436135 183436146 E2F6 JASPAR yes 118412277
chr1 183436147 183436157 MAX JASPAR yes 118412278
chr1 183436147 183436158 USF1 JASPAR yes 118412279
chr1 183436147 183436159 HES5 JASPAR yes 118412280
chr1 183436148 183436158 CLOCK JASPAR yes 118412281
chr1 183436148 183436158 HEY1 JASPAR yes 118412282
chr1 183436148 183436158 HEY2 JASPAR yes 118412283
chr1 183436148 183436158 MAX JASPAR yes 118412284
chr1 183436148 183436158 MNT JASPAR yes 118412285
chr1 183436150 183436155 MYC TRANSFAC yes 118412286
chr1 183436150 183436155 USF1 TRANSFAC yes 118412287
chr1 183436150 183436155 USF2 TRANSFAC yes 118412288
chr1 183436150 183436157 USF1 JASPAR yes 118412289
chr1 183436154 183436159 TFAP2A TRANSFAC yes 118412290
chr1 183436154 183436160 MZF1 JASPAR yes 118412291
chr1 183436165 183436169 H4TF2 TRANSFAC yes 118412292
chr1 183436173 183436188 SCRT1 JASPAR yes 118412293
chr1 183436183 183436188 TFAP2A TRANSFAC yes 118412294
chr1 183436183 183436189 MZF1 JASPAR yes 118412295
chr1 183436184 183436194 GSC2 JASPAR yes 118412296
chr1 183436185 183436193 RHOXF1 JASPAR yes 118412297
chr1 183436186 183436201 MEF2C JASPAR yes 118412298
chr1 183436187 183436202 MEF2A JASPAR yes 118412299
chr1 183436188 183436200 MEF2A JASPAR yes 118412300
chr1 183436188 183436200 MEF2B JASPAR yes 118412301
chr1 183436188 183436200 MEF2D JASPAR yes 118412302
chr1 183436189 183436199 MEF2A JASPAR yes 118412303
chr1 183436190 183436194 TEAD2 TRANSFAC yes 118412304
chr1 183436190 183436195 TBP TRANSFAC yes 118412305
chr1 183436190 183436196 TMF TRANSFAC yes 118412306
chr1 183436210 183436214 LFA1 TRANSFAC yes 118412307
SNP sites on vista4171[chr1:183436030-183436225]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 183436046 rs182730750 A G
EHF ELF1 ELF3 ELF5 ETV6 SPI1
780744
Genes possibly regulated by vista4171[chr1:183436030-183436225]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 183217372 183387737 - NMNAT2 ENSG00000157064.6 183387737 0.88 0.95 1639 51707
chr1 183441351 183567381 + SMG7 ENSG00000116698.16 183441351 0.66 0.99 1640 94874
Expression level of Genes
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miRNAs possibly regulated by vista4171[chr1:183436030-183436225]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results