EnhancerDB
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  3. vista4173[chr1:183549376-183549721]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4173[chr1:183549376-183549721]
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Tissue distribution of vista4173
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Transcription factor that possibly regulate vista4173[chr1:183549376-183549721]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 183549543 183549972 CTCF UCSC Txn Factor no Conserved 107850861
chr1 183549412 183549417 SP1 TRANSFAC yes 33688896
chr1 183549412 183549417 SP1 TRANSFAC yes 118412359
chr1 183549413 183549428 LEF1 JASPAR yes 33688897
chr1 183549413 183549428 LEF1 JASPAR yes 118412360
chr1 183549414 183549428 TCF7L2 JASPAR yes 33688898
chr1 183549414 183549428 TCF7L2 JASPAR yes 118412361
chr1 183549427 183549434 NFATC2 JASPAR yes 33688899
chr1 183549427 183549434 NFATC2 JASPAR yes 118412362
chr1 183549444 183549461 BCL6B JASPAR yes 33688900
chr1 183549444 183549461 BCL6B JASPAR yes 118412363
chr1 183549445 183549460 STAT1 JASPAR yes 33688901
chr1 183549445 183549460 STAT1 JASPAR yes 118412364
chr1 183549447 183549458 STAT1 JASPAR yes 33688902
chr1 183549447 183549458 STAT3 JASPAR yes 33688903
chr1 183549447 183549458 STAT1 JASPAR yes 118412365
chr1 183549447 183549458 STAT3 JASPAR yes 118412366
chr1 183549453 183549467 SPI1 JASPAR yes 33688904
chr1 183549453 183549467 SPIC JASPAR yes 33688905
chr1 183549453 183549467 SPI1 JASPAR yes 118412367
chr1 183549453 183549467 SPIC JASPAR yes 118412368
chr1 183549454 183549467 ELF1 JASPAR yes 33688906
chr1 183549454 183549467 ELF1 JASPAR yes 118412369
chr1 183549457 183549464 SPIB JASPAR yes 33688907
chr1 183549457 183549464 SPIB JASPAR yes 118412370
chr1 183549469 183549481 EHF JASPAR yes 33688908
chr1 183549469 183549481 ELF4 JASPAR yes 33688909
chr1 183549469 183549481 EHF JASPAR yes 118412371
chr1 183549469 183549481 ELF4 JASPAR yes 118412372
chr1 183549469 183549482 ELF3 JASPAR yes 33688910
chr1 183549469 183549482 ELF3 JASPAR yes 118412373
chr1 183549488 183549506 IRF2 JASPAR yes 33688911
chr1 183549488 183549506 IRF2 JASPAR yes 118412374
chr1 183549489 183549510 IRF1 JASPAR yes 33688912
chr1 183549489 183549510 IRF1 JASPAR yes 118412375
chr1 183549491 183549506 STAT2 JASPAR yes 33688913
chr1 183549491 183549506 STAT2 JASPAR yes 118412376
chr1 183549492 183549506 SPI1 JASPAR yes 33688914
chr1 183549492 183549506 STAT1 JASPAR yes 33688915
chr1 183549492 183549506 SPI1 JASPAR yes 118412377
chr1 183549492 183549506 STAT1 JASPAR yes 118412378
chr1 183549493 183549507 IRF7 JASPAR yes 33688916
chr1 183549493 183549507 IRF8 JASPAR yes 33688917
chr1 183549493 183549507 IRF7 JASPAR yes 118412379
chr1 183549493 183549507 IRF8 JASPAR yes 118412380
chr1 183549515 183549520 SP1 TRANSFAC yes 33688918
chr1 183549515 183549520 SP1 TRANSFAC yes 118412381
chr1 183549520 183549530 HMBOX1 JASPAR yes 33688919
chr1 183549520 183549530 HMBOX1 JASPAR yes 118412382
chr1 183549522 183549525 MYB TRANSFAC yes 33688920
chr1 183549522 183549525 MYB TRANSFAC yes 118412383
chr1 183549578 183549592 STAT1 JASPAR yes 33688921
chr1 183549578 183549592 STAT1 JASPAR yes 118412384
chr1 183549579 183549590 ETV2 JASPAR yes 33688922
chr1 183549579 183549590 ETV2 JASPAR yes 118412385
chr1 183549579 183549592 ELF1 JASPAR yes 33688923
chr1 183549579 183549592 ELF1 JASPAR yes 118412386
chr1 183549586 183549601 STAT1 JASPAR yes 33688924
chr1 183549586 183549601 STAT1 JASPAR yes 118412387
chr1 183549588 183549599 STAT1 JASPAR yes 33688925
chr1 183549588 183549599 STAT3 JASPAR yes 33688926
chr1 183549588 183549599 STAT1 JASPAR yes 118412388
chr1 183549588 183549599 STAT3 JASPAR yes 118412389
chr1 183549593 183549605 PKNOX2 JASPAR yes 33688927
chr1 183549593 183549605 PKNOX2 JASPAR yes 118412390
chr1 183549594 183549604 NHLH1 JASPAR yes 33688928
chr1 183549594 183549604 NHLH1 JASPAR yes 118412391
chr1 183549603 183549613 NFATC3 JASPAR yes 33688929
chr1 183549603 183549613 NFATC3 JASPAR yes 118412392
chr1 183549633 183549652 REST JASPAR yes 33688930
chr1 183549633 183549652 REST JASPAR yes 118412393
chr1 183549644 183549659 NR2C2 JASPAR yes 33688931
chr1 183549644 183549659 NR2C2 JASPAR yes 118412394
chr1 183549654 183549658 LFA1 TRANSFAC yes 33688932
chr1 183549654 183549658 LFA1 TRANSFAC yes 118412395
chr1 183549666 183549669 MYB TRANSFAC yes 33688933
chr1 183549666 183549669 MYB TRANSFAC yes 118412396
chr1 183549667 183549681 BATF3 JASPAR yes 33688934
chr1 183549667 183549681 BATF3 JASPAR yes 118412397
chr1 183549670 183549687 RXRA JASPAR yes 33688935
chr1 183549670 183549687 RXRA JASPAR yes 118412398
chr1 183549674 183549685 NRL JASPAR yes 33688936
chr1 183549674 183549685 NRL JASPAR yes 118412399
chr1 183549697 183549705 EHF JASPAR yes 33688937
chr1 183549697 183549705 EHF JASPAR yes 118412400
chr1 183549700 183549714 ZIC1 JASPAR yes 33688938
chr1 183549700 183549714 ZIC1 JASPAR yes 118412401
chr1 183549700 183549715 ZIC3 JASPAR yes 33688939
chr1 183549700 183549715 ZIC4 JASPAR yes 33688940
chr1 183549700 183549715 ZIC3 JASPAR yes 118412402
chr1 183549700 183549715 ZIC4 JASPAR yes 118412403
SNP sites on vista4173[chr1:183549376-183549721]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 183549558 rs184410994 G A,C
CTCF
781124
Genes possibly regulated by vista4173[chr1:183549376-183549721]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 183524698 183560011 - NCF2 ENSG00000116701.10 183560011 0.92 0.96 1641 89710
chr1 183592401 183604892 - ARPC5 ENSG00000162704.11 183604892 0.83 0.98 1642 44829
chr1 183605220 183897665 + RGL1 ENSG00000143344.11 183605220 0.76 0.97 1643 44501
chr1 183615541 183622451 - APOBEC4 ENSG00000173627.6 183622451 0.99 0.0 1644 27270
Expression level of Genes
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miRNAs possibly regulated by vista4173[chr1:183549376-183549721]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results