EnhancerDB
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  3. vista418[chr1:12675687-12675874]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista418[chr1:12675687-12675874]
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Tissue distribution of vista418
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Transcription factor that possibly regulate vista418[chr1:12675687-12675874]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12675693 12675707 PLAG1 JASPAR yes 26839878
chr1 12675693 12675707 PLAG1 JASPAR yes 118233686
chr1 12675694 12675704 HINFP JASPAR yes 26839879
chr1 12675694 12675704 HINFP JASPAR yes 118233687
chr1 12675694 12675706 HINFP JASPAR yes 26839880
chr1 12675694 12675706 HINFP JASPAR yes 118233688
chr1 12675700 12675705 SP1 TRANSFAC yes 26839881
chr1 12675700 12675705 SP1 TRANSFAC yes 118233689
chr1 12675700 12675706 SP1 TRANSFAC yes 26839882
chr1 12675700 12675706 SP1 TRANSFAC yes 118233690
chr1 12675704 12675724 ESR1 JASPAR yes 26839883
chr1 12675704 12675724 ESR1 JASPAR yes 118233691
chr1 12675743 12675749 SOX10 JASPAR yes 26839884
chr1 12675743 12675749 SOX10 JASPAR yes 118233692
chr1 12675758 12675774 SRF JASPAR yes 26839885
chr1 12675758 12675774 SRF JASPAR yes 118233693
chr1 12675758 12675776 SRF JASPAR yes 26839886
chr1 12675758 12675776 SRF JASPAR yes 118233694
chr1 12675761 12675770 SRF TRANSFAC yes 26839887
chr1 12675761 12675770 SRF TRANSFAC yes 118233695
chr1 12675761 12675773 SRF JASPAR yes 26839888
chr1 12675761 12675773 SRF JASPAR yes 118233696
chr1 12675762 12675772 HOXA13 JASPAR yes 26839889
chr1 12675762 12675772 HOXB13 JASPAR yes 26839890
chr1 12675762 12675772 HOXD13 JASPAR yes 26839891
chr1 12675762 12675772 HOXA13 JASPAR yes 118233697
chr1 12675762 12675772 HOXB13 JASPAR yes 118233698
chr1 12675762 12675772 HOXD13 JASPAR yes 118233699
chr1 12675763 12675772 CDX1 JASPAR yes 26839892
chr1 12675763 12675772 CDX1 JASPAR yes 118233700
chr1 12675770 12675774 LFA1 TRANSFAC yes 26839893
chr1 12675770 12675774 LFA1 TRANSFAC yes 118233701
chr1 12675773 12675788 TFAP2A JASPAR yes 26839894
chr1 12675773 12675788 TFAP2A JASPAR yes 118233702
chr1 12675779 12675800 IRF1 JASPAR yes 26839895
chr1 12675779 12675800 IRF1 JASPAR yes 118233703
chr1 12675781 12675796 IRF9 JASPAR yes 26839896
chr1 12675781 12675796 IRF9 JASPAR yes 118233704
chr1 12675782 12675787 ETS2 TRANSFAC yes 26839897
chr1 12675782 12675787 ETS2 TRANSFAC yes 118233705
chr1 12675782 12675790 FEV JASPAR yes 26839898
chr1 12675782 12675790 FEV JASPAR yes 118233706
chr1 12675783 12675797 STAT1 JASPAR yes 26839899
chr1 12675783 12675797 STAT1 JASPAR yes 118233707
chr1 12675783 12675798 PRDM1 JASPAR yes 26839900
chr1 12675783 12675798 STAT2 JASPAR yes 26839901
chr1 12675783 12675798 PRDM1 JASPAR yes 118233708
chr1 12675783 12675798 STAT2 JASPAR yes 118233709
chr1 12675784 12675796 IRF1 JASPAR yes 26839902
chr1 12675784 12675796 IRF1 JASPAR yes 118233710
chr1 12675791 12675802 NRL JASPAR yes 26839903
chr1 12675791 12675802 NRL JASPAR yes 118233711
chr1 12675791 12675806 MAFK JASPAR yes 26839904
chr1 12675791 12675806 MAFK JASPAR yes 118233712
chr1 12675811 12675825 SPI1 JASPAR yes 26839905
chr1 12675811 12675825 SPIC JASPAR yes 26839906
chr1 12675811 12675825 SPI1 JASPAR yes 118233713
chr1 12675811 12675825 SPIC JASPAR yes 118233714
chr1 12675829 12675843 NR2F1 JASPAR yes 26839907
chr1 12675829 12675843 NR2F1 JASPAR yes 118233715
chr1 12675857 12675867 MZF1 JASPAR yes 26839908
chr1 12675857 12675867 MZF1 JASPAR yes 118233716
chr1 12675860 12675866 SP1 TRANSFAC yes 26839909
chr1 12675860 12675866 SP1 TRANSFAC yes 118233717
chr1 12675871 12675882 ESRRA JASPAR yes 26839910
chr1 12675871 12675882 ESRRB JASPAR yes 26839911
chr1 12675871 12675882 ESRRA JASPAR yes 118233718
chr1 12675871 12675882 ESRRB JASPAR yes 118233719
chr1 12675871 12675884 NR2F1 JASPAR yes 26839912
chr1 12675871 12675884 NR2F1 JASPAR yes 118233720
chr1 12675873 12675881 NR4A2 JASPAR yes 26839913
chr1 12675873 12675881 NR4A2 JASPAR yes 118233721
SNP sites on vista418[chr1:12675687-12675874]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12675698 rs78831455 C A,T
HINFP PLAG1
87543
chr1 12675699 rs4240903 G A
HINFP PLAG1
87544
chr1 12675736 rs3010915 T A no 87545
chr1 12675781 rs185925512 T C
IRF1 IRF9 TFAP2A
87546
chr1 12675812 rs189068364 G C
SPI1 SPIC
87547
chr1 12675827 rs557326024 G A no 87548
chr1 12675849 rs533906881 G T no 87549
Genes possibly regulated by vista418[chr1:12675687-12675874]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12627939 12677737 - DHRS3 ENSG00000162496.4 12677737 0.85 1.0 169 98137
chr1 12704566 12727097 + AADACL4 ENSG00000204518.2 12704566 0.97 0.98 170 71308
Expression level of Genes
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miRNAs possibly regulated by vista418[chr1:12675687-12675874]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results