EnhancerDB
  1. Home
  2. Enhancers
  3. vista42[chr1:1609619-1609864]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42[chr1:1609619-1609864]
Back to top
Tissue distribution of vista42
Back to top
Transcription factor that possibly regulate vista42[chr1:1609619-1609864]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1609069 1609701 RUNX3 UCSC Txn Factor no Conserved 107801794
chr1 1609611 1609619 TBX15 JASPAR yes 26197821
chr1 1609611 1609619 TBX15 JASPAR yes 118215036
chr1 1609615 1609636 ZNF263 JASPAR yes 26197822
chr1 1609615 1609636 ZNF263 JASPAR yes 118215037
chr1 1609624 1609632 NR4A2 JASPAR yes 26197823
chr1 1609624 1609632 NR4A2 JASPAR yes 118215038
chr1 1609625 1609635 RORA JASPAR yes 26197824
chr1 1609625 1609635 RORA JASPAR yes 118215039
chr1 1609626 1609640 ZIC1 JASPAR yes 26197825
chr1 1609626 1609640 ZIC1 JASPAR yes 118215040
chr1 1609626 1609641 ZIC3 JASPAR yes 26197826
chr1 1609626 1609641 ZIC4 JASPAR yes 26197827
chr1 1609626 1609641 ZIC3 JASPAR yes 118215041
chr1 1609626 1609641 ZIC4 JASPAR yes 118215042
chr1 1609635 1609650 FOXP1 JASPAR yes 26197828
chr1 1609635 1609650 FOXP1 JASPAR yes 118215043
chr1 1609636 1609648 FOXC2 JASPAR yes 26197829
chr1 1609636 1609648 FOXC2 JASPAR yes 118215044
chr1 1609636 1609650 FOXF2 JASPAR yes 26197830
chr1 1609636 1609650 FOXF2 JASPAR yes 118215045
chr1 1609637 1609645 FOXG1 JASPAR yes 26197831
chr1 1609637 1609645 FOXG1 JASPAR yes 118215046
chr1 1609641 1609653 POU3F1 JASPAR yes 26197832
chr1 1609641 1609653 POU3F1 JASPAR yes 118215047
chr1 1609642 1609650 FOXL1 JASPAR yes 26197833
chr1 1609642 1609650 FOXL1 JASPAR yes 118215048
chr1 1609642 1609654 FOXC2 JASPAR yes 26197834
chr1 1609642 1609654 FOXC2 JASPAR yes 118215049
chr1 1609643 1609651 FOXG1 JASPAR yes 26197835
chr1 1609643 1609651 FOXG1 JASPAR yes 118215050
chr1 1609643 1609654 FOXC1 JASPAR yes 26197836
chr1 1609643 1609654 FOXC1 JASPAR yes 118215051
chr1 1609664 1609676 BHLHE23 JASPAR yes 26197837
chr1 1609664 1609676 BHLHE23 JASPAR yes 118215052
chr1 1609665 1609675 BHLHE22 JASPAR yes 26197838
chr1 1609665 1609675 NEUROD2 JASPAR yes 26197839
chr1 1609665 1609675 OLIG2 JASPAR yes 26197840
chr1 1609665 1609675 BHLHE22 JASPAR yes 118215053
chr1 1609665 1609675 NEUROD2 JASPAR yes 118215054
chr1 1609665 1609675 OLIG2 JASPAR yes 118215055
chr1 1609669 1609677 FOXL1 JASPAR yes 26197841
chr1 1609669 1609677 FOXL1 JASPAR yes 118215056
chr1 1609669 1609680 FOXB1 JASPAR yes 26197842
chr1 1609669 1609680 FOXB1 JASPAR yes 118215057
chr1 1609670 1609681 FOXB1 JASPAR yes 26197843
chr1 1609670 1609681 FOXB1 JASPAR yes 118215058
chr1 1609673 1609681 FOXL1 JASPAR yes 26197844
chr1 1609673 1609681 FOXL1 JASPAR yes 118215059
chr1 1609673 1609687 FOXF2 JASPAR yes 26197845
chr1 1609673 1609687 FOXF2 JASPAR yes 118215060
chr1 1609675 1609686 FOXB1 JASPAR yes 26197846
chr1 1609675 1609686 FOXC1 JASPAR yes 26197847
chr1 1609675 1609686 FOXB1 JASPAR yes 118215061
chr1 1609675 1609686 FOXC1 JASPAR yes 118215062
chr1 1609675 1609687 FOXC2 JASPAR yes 26197848
chr1 1609675 1609687 FOXC2 JASPAR yes 118215063
chr1 1609676 1609688 FOXI1 JASPAR yes 26197849
chr1 1609676 1609688 FOXI1 JASPAR yes 118215064
chr1 1609678 1609694 SOX8 JASPAR yes 26197850
chr1 1609678 1609694 SOX8 JASPAR yes 118215065
chr1 1609705 1609725 RREB1 JASPAR yes 26197851
chr1 1609705 1609725 RREB1 JASPAR yes 118215066
chr1 1609712 1609722 ZNF740 JASPAR yes 26197852
chr1 1609712 1609722 ZNF740 JASPAR yes 118215067
chr1 1609715 1609725 SP1 JASPAR yes 26197853
chr1 1609715 1609725 SP1 JASPAR yes 118215068
chr1 1609716 1609722 SP1 TRANSFAC yes 26197854
chr1 1609716 1609722 SP1 TRANSFAC yes 118215069
chr1 1609716 1609726 SP1 JASPAR yes 26197855
chr1 1609716 1609726 SP1 JASPAR yes 118215070
chr1 1609719 1609731 INSM1 JASPAR yes 26197856
chr1 1609719 1609731 INSM1 JASPAR yes 118215071
chr1 1609730 1609751 REST JASPAR yes 26197857
chr1 1609730 1609751 REST JASPAR yes 118215072
chr1 1609731 1609750 REST JASPAR yes 26197858
chr1 1609731 1609750 REST JASPAR yes 118215073
chr1 1609732 1609751 PAX5 JASPAR yes 26197859
chr1 1609732 1609751 PAX5 JASPAR yes 118215074
chr1 1609753 1609768 NR2C2 JASPAR yes 26197860
chr1 1609753 1609768 NR2C2 JASPAR yes 118215075
chr1 1609758 1609775 RXRA JASPAR yes 26197861
chr1 1609758 1609775 RXRA JASPAR yes 118215076
chr1 1609762 1609782 RREB1 JASPAR yes 26197862
chr1 1609762 1609782 RREB1 JASPAR yes 118215077
chr1 1609767 1609776 ZEB1 JASPAR yes 26197863
chr1 1609767 1609776 ZEB1 JASPAR yes 118215078
chr1 1609770 1609775 USF2 TRANSFAC yes 26197864
chr1 1609770 1609775 USF2 TRANSFAC yes 118215079
chr1 1609798 1609813 HNF4G JASPAR yes 26197865
chr1 1609798 1609813 HNF4G JASPAR yes 118215080
chr1 1609803 1609810 E2F1 TRANSFAC yes 26197866
chr1 1609803 1609810 E2F1 TRANSFAC yes 118215081
chr1 1609809 1609819 MZF1 JASPAR yes 26197867
chr1 1609809 1609819 MZF1 JASPAR yes 118215082
chr1 1609810 1609816 MZF1 JASPAR yes 26197868
chr1 1609810 1609816 MZF1 JASPAR yes 118215083
chr1 1609843 1609849 MZF1 JASPAR yes 26197869
chr1 1609843 1609849 MZF1 JASPAR yes 118215084
SNP sites on vista42[chr1:1609619-1609864]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 1609707 rs114806341 C T
RREB1
8351
chr1 1609755 rs138811241 G A
NR2C2
8352
Genes possibly regulated by vista42[chr1:1609619-1609864]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1477053 1510249 - SSU72 ENSG00000160075.10 1510249 0.61 0.99 42 630
chr1 1510355 1511373 + AL645728.1 ENSG00000215014.3 1510355 0.9 0.99 43 736
chr1 1533392 1535476 - C1orf233 ENSG00000228594.1 1535476 0.91 0.99 44 25857
chr1 1550795 1565990 + MIB2 ENSG00000197530.8 1550795 0.66 1.0 45 41176
chr1 1567474 1570639 + MMP23B ENSG00000189409.8 1567474 0.88 0.97 46 57855
chr1 1570603 1590473 - CDK11B ENSG00000248333.3 1590473 0.67 0.99 47 80854
chr1 1592939 1624167 - SLC35E2B ENSG00000189339.7 1624167 0.72 0.99 48 85697
chr1 1634169 1655766 - CDK11A ENSG00000008128.18 1655766 0.57 0.89 49 54098
chr1 1656277 1677431 - SLC35E2 ENSG00000215790.2 1677431 0.71 0.99 50 32433
Expression level of Genes
Back to top
miRNAs possibly regulated by vista42[chr1:1609619-1609864]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results