EnhancerDB
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  3. vista4201[chr1:183912062-183912419]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4201[chr1:183912062-183912419]
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Tissue distribution of vista4201
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Transcription factor that possibly regulate vista4201[chr1:183912062-183912419]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 183911937 183912327 MAX UCSC Txn Factor no Conserved 107851323
chr1 183911959 183912417 CTCF UCSC Txn Factor no Conserved 107851325
chr1 183912023 183912391 USF1 UCSC Txn Factor no Conserved 107851338
chr1 183912057 183912373 EBF1 UCSC Txn Factor no Conserved 107851343
chr1 183912140 183912464 CEBPB UCSC Txn Factor no Conserved 107851353
chr1 183912097 183912107 MAX JASPAR yes 118413728
chr1 183912097 183912108 USF1 JASPAR yes 118413729
chr1 183912097 183912108 USF2 JASPAR yes 118413730
chr1 183912098 183912108 MLXIPL JASPAR yes 118413731
chr1 183912098 183912108 MLX JASPAR yes 118413732
chr1 183912098 183912108 MNT JASPAR yes 118413733
chr1 183912098 183912108 TFE3 JASPAR yes 118413734
chr1 183912098 183912108 TFEB JASPAR yes 118413735
chr1 183912100 183912105 MYC TRANSFAC yes 118413736
chr1 183912100 183912105 USF1 TRANSFAC yes 118413737
chr1 183912100 183912105 USF2 TRANSFAC yes 118413738
chr1 183912100 183912107 USF1 JASPAR yes 118413739
chr1 183912137 183912152 RUNX2 JASPAR yes 118413740
chr1 183912138 183912141 MYB TRANSFAC yes 118413741
chr1 183912138 183912147 RUNX2 JASPAR yes 118413742
chr1 183912155 183912161 YY1 JASPAR yes 118413743
chr1 183912167 183912181 SPI1 JASPAR yes 118413744
chr1 183912173 183912182 NKX2-8 JASPAR yes 118413745
chr1 183912181 183912200 CTCF JASPAR yes 118413746
chr1 183912195 183912200 GATA2 JASPAR yes 118413747
chr1 183912214 183912228 EBF1 JASPAR yes 118413748
chr1 183912215 183912226 EBF1 JASPAR yes 118413749
chr1 183912216 183912227 EBF1 JASPAR yes 118413750
chr1 183912236 183912242 NFIC JASPAR yes 118413751
chr1 183912241 183912261 RREB1 JASPAR yes 118413752
chr1 183912244 183912259 RUNX2 JASPAR yes 118413753
chr1 183912246 183912256 MAX JASPAR yes 118413754
chr1 183912246 183912257 USF2 JASPAR yes 118413755
chr1 183912246 183912266 RREB1 JASPAR yes 118413756
chr1 183912247 183912257 TFE3 JASPAR yes 118413757
chr1 183912247 183912257 TFEB JASPAR yes 118413758
chr1 183912247 183912257 TFEC JASPAR yes 118413759
chr1 183912247 183912258 USF1 JASPAR yes 118413760
chr1 183912254 183912264 MAX JASPAR yes 118413761
chr1 183912254 183912265 USF1 JASPAR yes 118413762
chr1 183912254 183912265 USF2 JASPAR yes 118413763
chr1 183912255 183912265 TFE3 JASPAR yes 118413764
chr1 183912255 183912265 TFEB JASPAR yes 118413765
chr1 183912255 183912265 TFEC JASPAR yes 118413766
chr1 183912255 183912266 USF1 JASPAR yes 118413767
chr1 183912265 183912277 TGIF2 JASPAR yes 118413768
chr1 183912277 183912281 LFA1 TRANSFAC yes 118413769
chr1 183912292 183912304 HNF1B JASPAR yes 118413770
chr1 183912306 183912310 YY1 TRANSFAC yes 118413771
chr1 183912335 183912342 JUN TRANSFAC yes 118413772
chr1 183912335 183912352 RARA JASPAR yes 118413773
chr1 183912351 183912355 YY1 TRANSFAC yes 118413774
chr1 183912373 183912383 FIGLA JASPAR yes 118413775
chr1 183912375 183912380 USF2 TRANSFAC yes 118413776
chr1 183912405 183912416 E2F6 JASPAR yes 118413777
chr1 183912406 183912411 SP1 TRANSFAC yes 118413778
SNP sites on vista4201[chr1:183912062-183912419]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 183912104 rs943409 G A
CTCF EBF1 MAX MLX MLXIPL MNT MYC TFE3 TFEB USF1 USF2
783885
chr1 183912305 rs115483956 C T
CEBPB CTCF EBF1 MAX USF1
783886
chr1 183912319 rs734657 C A
CEBPB CTCF EBF1 MAX USF1
783887
Genes possibly regulated by vista4201[chr1:183912062-183912419]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 183898796 184006863 - COLGALT2 ENSG00000198756.6 184006863 0.76 0.91 1645 5556
Expression level of Genes
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miRNAs possibly regulated by vista4201[chr1:183912062-183912419]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results