EnhancerDB
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  3. vista42038[chr3:119039607-119039839]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42038[chr3:119039607-119039839]
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Tissue distribution of vista42038
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Transcription factor that possibly regulate vista42038[chr3:119039607-119039839]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 119039607 119039625 IRF2 JASPAR yes 5162153
chr3 119039607 119039625 IRF2 JASPAR yes 71033204
chr3 119039610 119039625 PRDM1 JASPAR yes 5162154
chr3 119039610 119039625 PRDM1 JASPAR yes 71033205
chr3 119039651 119039656 GATA2 JASPAR yes 5162155
chr3 119039651 119039656 GATA2 JASPAR yes 71033206
chr3 119039653 119039659 MZF1 JASPAR yes 5162156
chr3 119039653 119039659 MZF1 JASPAR yes 71033207
chr3 119039662 119039673 DUX4 JASPAR yes 5162157
chr3 119039662 119039673 DUX4 JASPAR yes 71033208
chr3 119039679 119039689 CLOCK JASPAR yes 5162158
chr3 119039679 119039689 MAX JASPAR yes 5162159
chr3 119039679 119039689 CLOCK JASPAR yes 71033209
chr3 119039679 119039689 MAX JASPAR yes 71033210
chr3 119039680 119039687 USF1 JASPAR yes 5162160
chr3 119039680 119039687 USF1 JASPAR yes 71033211
chr3 119039680 119039690 MAX JASPAR yes 5162161
chr3 119039680 119039690 MAX JASPAR yes 71033212
chr3 119039681 119039686 MYC TRANSFAC yes 5162162
chr3 119039681 119039686 USF1 TRANSFAC yes 5162163
chr3 119039681 119039686 USF2 TRANSFAC yes 5162164
chr3 119039681 119039686 MYC TRANSFAC yes 71033213
chr3 119039681 119039686 USF1 TRANSFAC yes 71033214
chr3 119039681 119039686 USF2 TRANSFAC yes 71033215
chr3 119039682 119039699 ZNF410 JASPAR yes 5162165
chr3 119039682 119039699 ZNF410 JASPAR yes 71033216
chr3 119039691 119039697 MAZ TRANSFAC yes 5162166
chr3 119039691 119039697 MAZ TRANSFAC yes 71033217
chr3 119039699 119039713 GLIS3 JASPAR yes 5162167
chr3 119039699 119039713 GLIS3 JASPAR yes 71033218
chr3 119039702 119039707 SP1 TRANSFAC yes 5162168
chr3 119039702 119039707 SP1 TRANSFAC yes 71033219
chr3 119039709 119039719 ALX3 JASPAR yes 5162169
chr3 119039709 119039719 ALX3 JASPAR yes 71033220
chr3 119039710 119039723 DUXA JASPAR yes 5162170
chr3 119039710 119039723 DUXA JASPAR yes 71033221
chr3 119039711 119039722 DUX4 JASPAR yes 5162171
chr3 119039711 119039722 PHOX2A JASPAR yes 5162172
chr3 119039711 119039722 PROP1 JASPAR yes 5162173
chr3 119039711 119039722 DUX4 JASPAR yes 71033222
chr3 119039711 119039722 PHOX2A JASPAR yes 71033223
chr3 119039711 119039722 PROP1 JASPAR yes 71033224
chr3 119039713 119039718 MYB TRANSFAC yes 5162174
chr3 119039713 119039718 MYB TRANSFAC yes 71033225
chr3 119039715 119039721 JUN TRANSFAC yes 5162175
chr3 119039715 119039721 JUN TRANSFAC yes 71033226
chr3 119039723 119039728 SP1 TRANSFAC yes 5162176
chr3 119039723 119039728 SP1 TRANSFAC yes 71033227
chr3 119039752 119039766 JUN JASPAR yes 5162177
chr3 119039752 119039766 JUN JASPAR yes 71033228
chr3 119039755 119039766 JUNB JASPAR yes 5162178
chr3 119039755 119039766 JUNB JASPAR yes 71033229
chr3 119039758 119039764 JUN TRANSFAC yes 5162179
chr3 119039758 119039764 JUN TRANSFAC yes 71033230
chr3 119039762 119039777 ZBTB33 JASPAR yes 5162180
chr3 119039762 119039777 ZBTB33 JASPAR yes 71033231
chr3 119039765 119039780 ZBTB33 JASPAR yes 5162181
chr3 119039765 119039780 ZBTB33 JASPAR yes 71033232
chr3 119039795 119039806 NFKB1 JASPAR yes 5162182
chr3 119039795 119039806 NFKB1 JASPAR yes 71033233
chr3 119039830 119039845 LEF1 JASPAR yes 5162183
chr3 119039830 119039845 LEF1 JASPAR yes 71033234
SNP sites on vista42038[chr3:119039607-119039839]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 119039723 rs9821759 T C
DUXA SP1
6977754
chr3 119039787 rs59432425 T C no 6977755
Genes possibly regulated by vista42038[chr3:119039607-119039839]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 118930579 118959950 - B4GALT4 ENSG00000121578.8 118959950 0.69 0.99 3968 20343
chr3 119013220 119139561 + ARHGAP31 ENSG00000031081.6 119013220 0.84 0.98 3969 73613
Expression level of Genes
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miRNAs possibly regulated by vista42038[chr3:119039607-119039839]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results