EnhancerDB
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  3. vista42039[chr3:119042640-119043071]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42039[chr3:119042640-119043071]
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Tissue distribution of vista42039
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Transcription factor that possibly regulate vista42039[chr3:119042640-119043071]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 119042640 119042644 TEAD2 TRANSFAC yes 5162684
chr3 119042640 119042644 TEAD2 TRANSFAC yes 71033235
chr3 119042642 119042645 MYB TRANSFAC yes 5162685
chr3 119042642 119042645 MYB TRANSFAC yes 71033236
chr3 119042669 119042680 E2F6 JASPAR yes 5162686
chr3 119042669 119042680 E2F6 JASPAR yes 71033237
chr3 119042671 119042679 SP1 TRANSFAC yes 5162687
chr3 119042671 119042679 SP1 TRANSFAC yes 71033238
chr3 119042673 119042679 MAZ TRANSFAC yes 5162688
chr3 119042673 119042679 MAZ TRANSFAC yes 71033239
chr3 119042680 119042701 ZNF263 JASPAR yes 5162689
chr3 119042680 119042701 ZNF263 JASPAR yes 71033240
chr3 119042687 119042708 ZNF263 JASPAR yes 5162690
chr3 119042687 119042708 ZNF263 JASPAR yes 71033241
chr3 119042688 119042699 E2F6 JASPAR yes 5162691
chr3 119042688 119042699 E2F6 JASPAR yes 71033242
chr3 119042737 119042740 MYB TRANSFAC yes 5162692
chr3 119042737 119042740 MYB TRANSFAC yes 71033243
chr3 119042748 119042769 ZNF263 JASPAR yes 5162693
chr3 119042748 119042769 ZNF263 JASPAR yes 71033244
chr3 119042750 119042761 FLI1 JASPAR yes 5162694
chr3 119042750 119042761 FLI1 JASPAR yes 71033245
chr3 119042751 119042755 YY1 TRANSFAC yes 5162695
chr3 119042751 119042755 YY1 TRANSFAC yes 71033246
chr3 119042751 119042761 ERF JASPAR yes 5162696
chr3 119042751 119042761 ERG JASPAR yes 5162697
chr3 119042751 119042761 ETS1 JASPAR yes 5162698
chr3 119042751 119042761 FEV JASPAR yes 5162699
chr3 119042751 119042761 FLI1 JASPAR yes 5162700
chr3 119042751 119042761 ERF JASPAR yes 71033247
chr3 119042751 119042761 ERG JASPAR yes 71033248
chr3 119042751 119042761 ETS1 JASPAR yes 71033249
chr3 119042751 119042761 FEV JASPAR yes 71033250
chr3 119042751 119042761 FLI1 JASPAR yes 71033251
chr3 119042751 119042762 ETV2 JASPAR yes 5162701
chr3 119042751 119042762 ETV2 JASPAR yes 71033252
chr3 119042751 119042764 ELF1 JASPAR yes 5162702
chr3 119042751 119042764 ELF1 JASPAR yes 71033253
chr3 119042752 119042760 FEV JASPAR yes 5162703
chr3 119042752 119042760 FEV JASPAR yes 71033254
chr3 119042757 119042761 NFE TRANSFAC yes 5162704
chr3 119042757 119042761 NFE TRANSFAC yes 71033255
chr3 119042760 119042781 ZNF263 JASPAR yes 5162705
chr3 119042760 119042781 ZNF263 JASPAR yes 71033256
chr3 119042761 119042782 ZNF263 JASPAR yes 5162706
chr3 119042761 119042782 ZNF263 JASPAR yes 71033257
chr3 119042762 119042772 MZF1 JASPAR yes 5162707
chr3 119042762 119042772 MZF1 JASPAR yes 71033258
chr3 119042762 119042774 INSM1 JASPAR yes 5162708
chr3 119042762 119042774 INSM1 JASPAR yes 71033259
chr3 119042763 119042778 NR2C2 JASPAR yes 5162709
chr3 119042763 119042778 NR2C2 JASPAR yes 71033260
chr3 119042765 119042775 SP1 JASPAR yes 5162710
chr3 119042765 119042775 SP1 JASPAR yes 71033261
chr3 119042766 119042780 SPI1 JASPAR yes 5162711
chr3 119042766 119042780 SPIC JASPAR yes 5162712
chr3 119042766 119042780 SPI1 JASPAR yes 71033262
chr3 119042766 119042780 SPIC JASPAR yes 71033263
chr3 119042772 119042783 FLI1 JASPAR yes 5162713
chr3 119042772 119042783 FLI1 JASPAR yes 71033264
chr3 119042779 119042790 STAT1 JASPAR yes 5162714
chr3 119042779 119042790 STAT3 JASPAR yes 5162715
chr3 119042779 119042790 STAT1 JASPAR yes 71033265
chr3 119042779 119042790 STAT3 JASPAR yes 71033266
chr3 119042795 119042800 SP1 TRANSFAC yes 5162716
chr3 119042795 119042800 SP1 TRANSFAC yes 71033267
chr3 119042800 119042811 EBF1 JASPAR yes 5162717
chr3 119042800 119042811 EBF1 JASPAR yes 71033268
chr3 119042823 119042834 HOXC11 JASPAR yes 5162718
chr3 119042823 119042834 HOXC12 JASPAR yes 5162719
chr3 119042823 119042834 HOXC13 JASPAR yes 5162720
chr3 119042823 119042834 HOXD12 JASPAR yes 5162721
chr3 119042823 119042834 HOXC11 JASPAR yes 71033269
chr3 119042823 119042834 HOXC12 JASPAR yes 71033270
chr3 119042823 119042834 HOXC13 JASPAR yes 71033271
chr3 119042823 119042834 HOXD12 JASPAR yes 71033272
chr3 119042828 119042849 IRF1 JASPAR yes 5162722
chr3 119042828 119042849 IRF1 JASPAR yes 71033273
chr3 119042829 119042842 POU2F2 JASPAR yes 5162723
chr3 119042829 119042842 POU2F2 JASPAR yes 71033274
chr3 119042829 119042850 IRF1 JASPAR yes 5162724
chr3 119042829 119042850 IRF1 JASPAR yes 71033275
chr3 119042833 119042848 PRDM1 JASPAR yes 5162725
chr3 119042833 119042848 STAT2 JASPAR yes 5162726
chr3 119042833 119042848 PRDM1 JASPAR yes 71033276
chr3 119042833 119042848 STAT2 JASPAR yes 71033277
chr3 119042834 119042855 MAFG JASPAR yes 5162727
chr3 119042834 119042855 MAFG JASPAR yes 71033278
chr3 119042839 119042857 MAFF JASPAR yes 5162728
chr3 119042839 119042857 MAFF JASPAR yes 71033279
chr3 119042840 119042855 MAFK JASPAR yes 5162729
chr3 119042840 119042855 MAFK JASPAR yes 71033280
chr3 119042844 119042855 NRL JASPAR yes 5162730
chr3 119042844 119042855 NRL JASPAR yes 71033281
chr3 119042859 119042865 TCF4 TRANSFAC yes 5162731
chr3 119042859 119042865 TCF4 TRANSFAC yes 71033282
chr3 119042869 119042884 STAT2 JASPAR yes 5162732
chr3 119042869 119042884 STAT2 JASPAR yes 71033283
chr3 119042870 119042884 STAT1 JASPAR yes 5162733
chr3 119042870 119042884 STAT1 JASPAR yes 71033284
chr3 119042871 119042876 H4TF1 TRANSFAC yes 5162734
chr3 119042871 119042876 H4TF1 TRANSFAC yes 71033285
chr3 119042876 119042893 BCL6B JASPAR yes 5162735
chr3 119042876 119042893 BCL6B JASPAR yes 71033286
chr3 119042878 119042885 NFATC2 JASPAR yes 5162736
chr3 119042878 119042885 NFATC2 JASPAR yes 71033287
chr3 119042887 119042892 GATA2 JASPAR yes 5162737
chr3 119042887 119042892 GATA2 JASPAR yes 71033288
chr3 119042891 119042900 NKX3-2 JASPAR yes 5162738
chr3 119042891 119042900 NKX3-2 JASPAR yes 71033289
chr3 119042906 119042912 YY1 JASPAR yes 5162739
chr3 119042906 119042912 YY1 JASPAR yes 71033290
chr3 119042908 119042929 ZNF263 JASPAR yes 5162740
chr3 119042908 119042929 ZNF263 JASPAR yes 71033291
chr3 119042915 119042921 YY1 JASPAR yes 5162741
chr3 119042915 119042921 YY1 JASPAR yes 71033292
chr3 119042935 119042946 TBX20 JASPAR yes 5162742
chr3 119042935 119042946 TBX20 JASPAR yes 71033293
chr3 119042961 119042970 HIC2 JASPAR yes 5162743
chr3 119042961 119042970 HIC2 JASPAR yes 71033294
chr3 119042993 119043011 IRF2 JASPAR yes 5162744
chr3 119042993 119043011 IRF2 JASPAR yes 71033295
chr3 119043002 119043017 PRDM1 JASPAR yes 5162745
chr3 119043002 119043017 PRDM1 JASPAR yes 71033296
chr3 119043004 119043018 SPIC JASPAR yes 5162746
chr3 119043004 119043018 SPIC JASPAR yes 71033297
chr3 119043007 119043014 SPIB JASPAR yes 5162747
chr3 119043007 119043014 SPIB JASPAR yes 71033298
chr3 119043010 119043020 MEF2A JASPAR yes 5162748
chr3 119043010 119043020 MEF2A JASPAR yes 71033299
chr3 119043029 119043042 SMAD2 JASPAR yes 5162749
chr3 119043029 119043042 SMAD2 JASPAR yes 71033300
chr3 119043030 119043040 SMAD3 JASPAR yes 5162750
chr3 119043030 119043040 SMAD3 JASPAR yes 71033301
SNP sites on vista42039[chr3:119042640-119043071]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 119042724 rs563724169 C A no 6977802
chr3 119042767 rs76222391 C T
INSM1 MZF1 NR2C2 SP1 SPI1 SPIC ZNF263
6977803
chr3 119042768 rs7646935 C G
INSM1 MZF1 NR2C2 SP1 SPI1 SPIC ZNF263
6977804
chr3 119042798 rs562991523 T C
SP1
6977805
chr3 119042905 rs201106743 T TTGCCATCCC no 6977806
chr3 119042905 rs370810742 T TTGCCATCCC no 6977807
chr3 119042940 rs72962536 G A
TBX20
6977808
chr3 119042963 rs74534515 T C
HIC2
6977809
chr3 119043011 rs1448434 C G
IRF2 MEF2A PRDM1 SPIB SPIC
6977810
Genes possibly regulated by vista42039[chr3:119042640-119043071]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 118930579 118959950 - B4GALT4 ENSG00000121578.8 118959950 0.69 0.99 3968 17310
chr3 119013220 119139561 + ARHGAP31 ENSG00000031081.6 119013220 0.84 0.98 3969 70580
Expression level of Genes
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miRNAs possibly regulated by vista42039[chr3:119042640-119043071]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results