EnhancerDB
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  3. vista42040[chr3:119052576-119052960]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42040[chr3:119052576-119052960]
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Tissue distribution of vista42040
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Transcription factor that possibly regulate vista42040[chr3:119052576-119052960]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 119052700 119052919 EP300 UCSC Txn Factor no Conserved 108529971
chr3 119052573 119052578 GATA2 JASPAR yes 5163698
chr3 119052573 119052578 GATA2 JASPAR yes 71033302
chr3 119052589 119052604 PRDM1 JASPAR yes 5163699
chr3 119052589 119052604 PRDM1 JASPAR yes 71033303
chr3 119052596 119052601 MYC TRANSFAC yes 5163700
chr3 119052596 119052601 MYC TRANSFAC yes 71033304
chr3 119052606 119052611 ETS2 TRANSFAC yes 5163701
chr3 119052606 119052611 ETS2 TRANSFAC yes 71033305
chr3 119052611 119052632 ZNF263 JASPAR yes 5163702
chr3 119052611 119052632 ZNF263 JASPAR yes 71033306
chr3 119052651 119052664 EOMES JASPAR yes 5163703
chr3 119052651 119052664 EOMES JASPAR yes 71033307
chr3 119052653 119052664 TBX20 JASPAR yes 5163704
chr3 119052653 119052664 TBX20 JASPAR yes 71033308
chr3 119052659 119052669 POU6F2 JASPAR yes 5163705
chr3 119052659 119052669 POU6F2 JASPAR yes 71033309
chr3 119052663 119052667 YY1 TRANSFAC yes 5163706
chr3 119052663 119052667 YY1 TRANSFAC yes 71033310
chr3 119052676 119052686 HOXC10 JASPAR yes 5163707
chr3 119052676 119052686 HOXD11 JASPAR yes 5163708
chr3 119052676 119052686 HOXD13 JASPAR yes 5163709
chr3 119052676 119052686 HOXC10 JASPAR yes 71033311
chr3 119052676 119052686 HOXD11 JASPAR yes 71033312
chr3 119052676 119052686 HOXD13 JASPAR yes 71033313
chr3 119052676 119052687 HOXA10 JASPAR yes 5163710
chr3 119052676 119052687 HOXC11 JASPAR yes 5163711
chr3 119052676 119052687 HOXC12 JASPAR yes 5163712
chr3 119052676 119052687 HOXD12 JASPAR yes 5163713
chr3 119052676 119052687 HOXA10 JASPAR yes 71033314
chr3 119052676 119052687 HOXC11 JASPAR yes 71033315
chr3 119052676 119052687 HOXC12 JASPAR yes 71033316
chr3 119052676 119052687 HOXD12 JASPAR yes 71033317
chr3 119052677 119052686 CDX1 JASPAR yes 5163714
chr3 119052677 119052686 CDX1 JASPAR yes 71033318
chr3 119052677 119052688 CDX2 JASPAR yes 5163715
chr3 119052677 119052688 CDX2 JASPAR yes 71033319
chr3 119052691 119052697 SOX10 JASPAR yes 5163716
chr3 119052691 119052697 SOX10 JASPAR yes 71033320
chr3 119052702 119052714 HNF1B JASPAR yes 5163717
chr3 119052702 119052714 HNF1B JASPAR yes 71033321
chr3 119052704 119052711 NKX3-1 JASPAR yes 5163718
chr3 119052704 119052711 NKX3-1 JASPAR yes 71033322
chr3 119052712 119052733 IRF1 JASPAR yes 5163719
chr3 119052712 119052733 IRF1 JASPAR yes 71033323
chr3 119052720 119052725 MYB TRANSFAC yes 5163720
chr3 119052720 119052725 MYB TRANSFAC yes 71033324
chr3 119052732 119052738 NFIC JASPAR yes 5163721
chr3 119052732 119052738 NFIC JASPAR yes 71033325
chr3 119052734 119052738 H1TF2 TRANSFAC yes 5163722
chr3 119052734 119052738 NFE TRANSFAC yes 5163723
chr3 119052734 119052738 SRF TRANSFAC yes 5163724
chr3 119052734 119052738 H1TF2 TRANSFAC yes 71033326
chr3 119052734 119052738 NFE TRANSFAC yes 71033327
chr3 119052734 119052738 SRF TRANSFAC yes 71033328
chr3 119052741 119052751 POU6F2 JASPAR yes 5163725
chr3 119052741 119052751 POU6F2 JASPAR yes 71033329
chr3 119052742 119052752 GSX2 JASPAR yes 5163726
chr3 119052742 119052752 GSX2 JASPAR yes 71033330
chr3 119052742 119052753 HOXC11 JASPAR yes 5163727
chr3 119052742 119052753 HOXC13 JASPAR yes 5163728
chr3 119052742 119052753 HOXC11 JASPAR yes 71033331
chr3 119052742 119052753 HOXC13 JASPAR yes 71033332
chr3 119052743 119052751 NKX6-1 JASPAR yes 5163729
chr3 119052743 119052751 NKX6-2 JASPAR yes 5163730
chr3 119052743 119052751 NKX6-1 JASPAR yes 71033333
chr3 119052743 119052751 NKX6-2 JASPAR yes 71033334
chr3 119052743 119052753 HOXC10 JASPAR yes 5163731
chr3 119052743 119052753 HOXD13 JASPAR yes 5163732
chr3 119052743 119052753 HOXC10 JASPAR yes 71033335
chr3 119052743 119052753 HOXD13 JASPAR yes 71033336
chr3 119052745 119052749 YY1 TRANSFAC yes 5163733
chr3 119052745 119052749 YY1 TRANSFAC yes 71033337
chr3 119052755 119052760 SP1 TRANSFAC yes 5163734
chr3 119052755 119052760 SP1 TRANSFAC yes 71033338
chr3 119052760 119052778 ESR2 JASPAR yes 5163735
chr3 119052760 119052778 ESR2 JASPAR yes 71033339
chr3 119052769 119052780 NFE2L2 JASPAR yes 5163736
chr3 119052769 119052780 NFE2L2 JASPAR yes 71033340
chr3 119052790 119052805 HNF4A JASPAR yes 5163737
chr3 119052790 119052805 HNF4A JASPAR yes 71033341
chr3 119052794 119052808 GATA2 JASPAR yes 5163738
chr3 119052794 119052808 GATA2 JASPAR yes 71033342
chr3 119052795 119052801 LEF1 TRANSFAC yes 5163739
chr3 119052795 119052801 SOX10 JASPAR yes 5163740
chr3 119052795 119052801 LEF1 TRANSFAC yes 71033343
chr3 119052795 119052801 SOX10 JASPAR yes 71033344
chr3 119052835 119052845 MAX JASPAR yes 5163741
chr3 119052835 119052845 MAX JASPAR yes 71033345
chr3 119052839 119052849 MAX JASPAR yes 5163742
chr3 119052839 119052849 MAX JASPAR yes 71033346
chr3 119052858 119052876 NR3C1 JASPAR yes 5163743
chr3 119052858 119052876 NR3C1 JASPAR yes 71033347
chr3 119052863 119052868 GATA2 JASPAR yes 5163744
chr3 119052863 119052868 GATA2 JASPAR yes 71033348
chr3 119052867 119052881 RORA JASPAR yes 5163745
chr3 119052867 119052881 RORA JASPAR yes 71033349
chr3 119052868 119052878 RORA JASPAR yes 5163746
chr3 119052868 119052878 RORA JASPAR yes 71033350
chr3 119052868 119052885 RARA JASPAR yes 5163747
chr3 119052868 119052885 RARA JASPAR yes 71033351
chr3 119052869 119052882 ZBTB18 JASPAR yes 5163748
chr3 119052869 119052882 ZBTB18 JASPAR yes 71033352
chr3 119052910 119052916 SOX10 JASPAR yes 5163749
chr3 119052910 119052916 SOX10 JASPAR yes 71033353
chr3 119052937 119052947 MZF1 JASPAR yes 5163750
chr3 119052937 119052947 MZF1 JASPAR yes 71033354
chr3 119052949 119052958 HIC2 JASPAR yes 5163751
chr3 119052949 119052958 HIC2 JASPAR yes 71033355
SNP sites on vista42040[chr3:119052576-119052960]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 119052591 rs9843001 G A
PRDM1
6977899
chr3 119052609 rs77797672 C T
ETS2
6977900
chr3 119052643 rs546599322 G A no 6977901
chr3 119052803 rs76694076 A G
EP300 GATA2 HNF4A
6977902
chr3 119052804 rs72962548 T C
EP300 GATA2 HNF4A
6977903
chr3 119052897 rs148325260 C A
EP300
6977904
Genes possibly regulated by vista42040[chr3:119052576-119052960]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 118930579 118959950 - B4GALT4 ENSG00000121578.8 118959950 0.69 0.99 3968 7374
chr3 119013220 119139561 + ARHGAP31 ENSG00000031081.6 119013220 0.84 0.98 3969 60644
Expression level of Genes
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miRNAs possibly regulated by vista42040[chr3:119052576-119052960]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results