EnhancerDB
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  3. vista42046[chr3:119142297-119142580]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42046[chr3:119142297-119142580]
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Tissue distribution of vista42046
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Transcription factor that possibly regulate vista42046[chr3:119142297-119142580]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 119142307 119142322 FOXP1 JASPAR yes 71033504
chr3 119142308 119142329 IRF1 JASPAR yes 71033505
chr3 119142309 119142329 RREB1 JASPAR yes 71033506
chr3 119142312 119142324 IRF1 JASPAR yes 71033507
chr3 119142312 119142327 STAT2 JASPAR yes 71033508
chr3 119142313 119142328 FOXP1 JASPAR yes 71033509
chr3 119142315 119142335 RREB1 JASPAR yes 71033510
chr3 119142317 119142332 FOXP1 JASPAR yes 71033511
chr3 119142318 119142329 FOXA1 JASPAR yes 71033512
chr3 119142318 119142333 FOXA1 JASPAR yes 71033513
chr3 119142319 119142331 FOXC2 JASPAR yes 71033514
chr3 119142319 119142339 RREB1 JASPAR yes 71033515
chr3 119142320 119142332 FOXI1 JASPAR yes 71033516
chr3 119142320 119142340 RREB1 JASPAR yes 71033517
chr3 119142323 119142343 RREB1 JASPAR yes 71033518
chr3 119142324 119142336 FOXI1 JASPAR yes 71033519
chr3 119142324 119142344 RREB1 JASPAR yes 71033520
chr3 119142327 119142347 RREB1 JASPAR yes 71033521
chr3 119142328 119142340 FOXI1 JASPAR yes 71033522
chr3 119142329 119142344 FOXP1 JASPAR yes 71033523
chr3 119142332 119142344 FOXI1 JASPAR yes 71033524
chr3 119142351 119142361 SP1 JASPAR yes 71033525
chr3 119142352 119142372 TP63 JASPAR yes 71033526
chr3 119142353 119142371 TP73 JASPAR yes 71033527
chr3 119142401 119142414 NFKB1 JASPAR yes 71033528
chr3 119142401 119142414 NFKB2 JASPAR yes 71033529
chr3 119142407 119142417 SREBF2 JASPAR yes 71033530
chr3 119142409 119142414 USF2 TRANSFAC yes 71033531
chr3 119142420 119142424 LFA1 TRANSFAC yes 71033532
chr3 119142438 119142442 NFE TRANSFAC yes 71033533
chr3 119142448 119142460 GRHL1 JASPAR yes 71033534
chr3 119142457 119142462 ETS2 TRANSFAC yes 71033535
chr3 119142467 119142479 MEF2D JASPAR yes 71033536
chr3 119142472 119142476 YY1 TRANSFAC yes 71033537
chr3 119142486 119142490 NFE TRANSFAC yes 71033538
chr3 119142489 119142510 IRF1 JASPAR yes 71033539
chr3 119142489 119142510 ZNF263 JASPAR yes 71033540
chr3 119142491 119142506 PRDM1 JASPAR yes 71033541
chr3 119142491 119142506 STAT2 JASPAR yes 71033542
chr3 119142492 119142506 SPIC JASPAR yes 71033543
chr3 119142492 119142506 STAT1 JASPAR yes 71033544
chr3 119142527 119142531 NFE TRANSFAC yes 71033545
chr3 119142527 119142532 GATA1 TRANSFAC yes 71033546
chr3 119142527 119142533 GATA3 JASPAR yes 71033547
chr3 119142533 119142537 YY1 TRANSFAC yes 71033548
SNP sites on vista42046[chr3:119142297-119142580]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 119142373 rs13315199 G C no 6978415
chr3 119142440 rs114873349 T C
NFE
6978416
chr3 119142519 rs202183092 TTCCCTG T no 6978417
Genes possibly regulated by vista42046[chr3:119142297-119142580]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 119148347 119187677 - TMEM39A ENSG00000176142.8 119187677 0.59 1.0 3970 54903
chr3 119187785 119213555 + POGLUT1 ENSG00000163389.6 119187785 0.6 0.99 3971 54795
chr3 119217379 119243937 + TIMMDC1 ENSG00000113845.5 119217379 0.58 0.99 3972 25201
Expression level of Genes
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miRNAs possibly regulated by vista42046[chr3:119142297-119142580]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results