EnhancerDB
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  3. vista42052[chr3:119230547-119230943]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42052[chr3:119230547-119230943]
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Tissue distribution of vista42052
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Transcription factor that possibly regulate vista42052[chr3:119230547-119230943]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 119230546 119230551 GATA2 JASPAR yes 5168880
chr3 119230546 119230551 GATA2 JASPAR yes 71033841
chr3 119230561 119230582 IRF1 JASPAR yes 5168881
chr3 119230561 119230582 IRF1 JASPAR yes 71033842
chr3 119230576 119230581 GATA2 JASPAR yes 5168882
chr3 119230576 119230581 GATA2 JASPAR yes 71033843
chr3 119230584 119230589 MYC TRANSFAC yes 5168883
chr3 119230584 119230589 MYC TRANSFAC yes 71033844
chr3 119230598 119230604 SOX10 JASPAR yes 5168884
chr3 119230598 119230604 SOX10 JASPAR yes 71033845
chr3 119230607 119230621 POU4F1 JASPAR yes 5168885
chr3 119230607 119230621 POU4F1 JASPAR yes 71033846
chr3 119230607 119230623 POU4F2 JASPAR yes 5168886
chr3 119230607 119230623 POU4F3 JASPAR yes 5168887
chr3 119230607 119230623 POU4F2 JASPAR yes 71033847
chr3 119230607 119230623 POU4F3 JASPAR yes 71033848
chr3 119230608 119230624 POU4F2 JASPAR yes 5168888
chr3 119230608 119230624 POU4F2 JASPAR yes 71033849
chr3 119230628 119230639 RUNX1 JASPAR yes 5168889
chr3 119230628 119230639 RUNX1 JASPAR yes 71033850
chr3 119230628 119230643 MEF2C JASPAR yes 5168890
chr3 119230628 119230643 MEF2C JASPAR yes 71033851
chr3 119230638 119230641 MYB TRANSFAC yes 5168891
chr3 119230638 119230641 MYB TRANSFAC yes 71033852
chr3 119230640 119230651 HOXC13 JASPAR yes 5168892
chr3 119230640 119230651 HOXC13 JASPAR yes 71033853
chr3 119230665 119230682 BCL6B JASPAR yes 5168893
chr3 119230665 119230682 BCL6B JASPAR yes 71033854
chr3 119230681 119230695 STAT1 JASPAR yes 5168894
chr3 119230681 119230695 STAT1 JASPAR yes 71033855
chr3 119230681 119230696 STAT2 JASPAR yes 5168895
chr3 119230681 119230696 STAT2 JASPAR yes 71033856
chr3 119230682 119230688 HiNF-A TRANSFAC yes 5168896
chr3 119230682 119230688 HiNF-A TRANSFAC yes 71033857
chr3 119230701 119230711 TEAD1 JASPAR yes 5168897
chr3 119230701 119230711 TEAD1 JASPAR yes 71033858
chr3 119230718 119230722 NFE TRANSFAC yes 5168898
chr3 119230718 119230722 NFE TRANSFAC yes 71033859
chr3 119230725 119230735 NFATC3 JASPAR yes 5168899
chr3 119230725 119230735 NFATC3 JASPAR yes 71033860
chr3 119230727 119230734 NFATC2 JASPAR yes 5168900
chr3 119230727 119230734 NFATC2 JASPAR yes 71033861
chr3 119230729 119230743 STAT1 JASPAR yes 5168901
chr3 119230729 119230743 STAT1 JASPAR yes 71033862
chr3 119230778 119230782 YY1 TRANSFAC yes 5168902
chr3 119230778 119230782 YY1 TRANSFAC yes 71033863
chr3 119230780 119230790 NFATC3 JASPAR yes 5168903
chr3 119230780 119230790 NFATC3 JASPAR yes 71033864
chr3 119230782 119230789 NFATC2 JASPAR yes 5168904
chr3 119230782 119230789 NFATC2 JASPAR yes 71033865
chr3 119230822 119230836 RORA JASPAR yes 5168905
chr3 119230822 119230836 RORA JASPAR yes 71033866
chr3 119230846 119230858 FOXC2 JASPAR yes 5168906
chr3 119230846 119230858 FOXC2 JASPAR yes 71033867
chr3 119230847 119230855 FOXG1 JASPAR yes 5168907
chr3 119230847 119230855 FOXG1 JASPAR yes 71033868
chr3 119230847 119230858 FOXB1 JASPAR yes 5168908
chr3 119230847 119230858 FOXC1 JASPAR yes 5168909
chr3 119230847 119230858 FOXB1 JASPAR yes 71033869
chr3 119230847 119230858 FOXC1 JASPAR yes 71033870
chr3 119230848 119230859 FOXA1 JASPAR yes 5168910
chr3 119230848 119230859 FOXA1 JASPAR yes 71033871
chr3 119230853 119230860 NKX3-1 JASPAR yes 5168911
chr3 119230853 119230860 NKX3-1 JASPAR yes 71033872
chr3 119230881 119230885 YY1 TRANSFAC yes 5168912
chr3 119230881 119230885 YY1 TRANSFAC yes 71033873
chr3 119230899 119230910 FOXA1 JASPAR yes 5168913
chr3 119230899 119230910 FOXA1 JASPAR yes 71033874
chr3 119230900 119230912 FOXC2 JASPAR yes 5168914
chr3 119230900 119230912 FOXC2 JASPAR yes 71033875
chr3 119230901 119230906 ETS2 TRANSFAC yes 5168915
chr3 119230901 119230906 ETS2 TRANSFAC yes 71033876
chr3 119230903 119230912 SRY JASPAR yes 5168916
chr3 119230903 119230912 SRY JASPAR yes 71033877
chr3 119230904 119230916 PBX1 JASPAR yes 5168917
chr3 119230904 119230916 PBX1 JASPAR yes 71033878
chr3 119230918 119230922 TEAD2 TRANSFAC yes 5168918
chr3 119230918 119230922 TEAD2 TRANSFAC yes 71033879
chr3 119230918 119230923 TBP TRANSFAC yes 5168919
chr3 119230918 119230923 TBP TRANSFAC yes 71033880
chr3 119230918 119230924 TFIID TRANSFAC yes 5168920
chr3 119230918 119230924 TFIID TRANSFAC yes 71033881
chr3 119230929 119230933 YY1 TRANSFAC yes 5168921
chr3 119230929 119230933 YY1 TRANSFAC yes 71033882
chr3 119230938 119230948 GSC JASPAR yes 5168922
chr3 119230938 119230948 GSC JASPAR yes 71033883
chr3 119230939 119230947 RHOXF1 JASPAR yes 5168923
chr3 119230939 119230947 RHOXF1 JASPAR yes 71033884
chr3 119230939 119230948 PITX3 JASPAR yes 5168924
chr3 119230939 119230948 PITX3 JASPAR yes 71033885
SNP sites on vista42052[chr3:119230547-119230943]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 119230789 rs9816392 A G
NFATC2 NFATC3
6978571
chr3 119230943 rs185858824 A T
GSC PITX3 RHOXF1
6978572
Genes possibly regulated by vista42052[chr3:119230547-119230943]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 119148347 119187677 - TMEM39A ENSG00000176142.8 119187677 0.59 1.0 3970 57130
chr3 119187785 119213555 + POGLUT1 ENSG00000163389.6 119187785 0.6 0.99 3971 57238
chr3 119217379 119243937 + TIMMDC1 ENSG00000113845.5 119217379 0.58 0.99 3972 86832
chr3 119243140 119278449 - CD80 ENSG00000121594.7 119278449 0.98 1.0 3973 52494
chr3 119298115 119308792 + ADPRH ENSG00000144843.7 119298115 0.73 0.99 3974 32828
chr3 119316689 119348658 + PLA1A ENSG00000144837.4 119316689 0.91 1.0 3975 14254
Expression level of Genes
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miRNAs possibly regulated by vista42052[chr3:119230547-119230943]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results