EnhancerDB
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  3. vista42053[chr3:119237356-119237846]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42053[chr3:119237356-119237846]
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Tissue distribution of vista42053
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Transcription factor that possibly regulate vista42053[chr3:119237356-119237846]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 119237397 119237412 FOXP1 JASPAR yes 71033886
chr3 119237398 119237413 FOXP1 JASPAR yes 71033887
chr3 119237399 119237414 FOXP1 JASPAR yes 71033888
chr3 119237399 119237420 IRF1 JASPAR yes 71033889
chr3 119237400 119237415 FOXP1 JASPAR yes 71033890
chr3 119237400 119237421 IRF1 JASPAR yes 71033891
chr3 119237401 119237416 FOXP1 JASPAR yes 71033892
chr3 119237406 119237427 IRF1 JASPAR yes 71033893
chr3 119237416 119237422 TBP TRANSFAC yes 71033894
chr3 119237418 119237439 IRF1 JASPAR yes 71033895
chr3 119237422 119237436 STAT1 JASPAR yes 71033896
chr3 119237426 119237441 HNF1A JASPAR yes 71033897
chr3 119237432 119237442 HOXA13 JASPAR yes 71033898
chr3 119237433 119237437 YY1 TRANSFAC yes 71033899
chr3 119237485 119237492 NFATC2 JASPAR yes 71033900
chr3 119237519 119237530 ESRRB JASPAR yes 71033901
chr3 119237522 119237535 NFKB1 JASPAR yes 71033902
chr3 119237523 119237527 ESR1 TRANSFAC yes 71033903
chr3 119237527 119237536 ZEB1 JASPAR yes 71033904
chr3 119237530 119237535 USF2 TRANSFAC yes 71033905
chr3 119237554 119237570 SOX4 JASPAR yes 71033906
chr3 119237559 119237565 NFIC JASPAR yes 71033907
chr3 119237561 119237565 H1TF2 TRANSFAC yes 71033908
chr3 119237561 119237565 NFE TRANSFAC yes 71033909
chr3 119237561 119237565 SRF TRANSFAC yes 71033910
chr3 119237579 119237593 CREB3L1 JASPAR yes 71033911
chr3 119237580 119237590 MAX JASPAR yes 71033912
chr3 119237581 119237591 HEY1 JASPAR yes 71033913
chr3 119237581 119237591 HEY2 JASPAR yes 71033914
chr3 119237581 119237591 MAX JASPAR yes 71033915
chr3 119237581 119237591 MNT JASPAR yes 71033916
chr3 119237582 119237589 USF1 JASPAR yes 71033917
chr3 119237582 119237592 MAX JASPAR yes 71033918
chr3 119237583 119237588 MYC TRANSFAC yes 71033919
chr3 119237583 119237588 USF1 TRANSFAC yes 71033920
chr3 119237583 119237588 USF2 TRANSFAC yes 71033921
chr3 119237615 119237619 H4TF2 TRANSFAC yes 71033922
chr3 119237626 119237636 BARHL2 JASPAR yes 71033923
chr3 119237628 119237632 YY1 TRANSFAC yes 71033924
chr3 119237635 119237645 ZNF740 JASPAR yes 71033925
chr3 119237643 119237658 MYBL2 JASPAR yes 71033926
chr3 119237650 119237653 MYB TRANSFAC yes 71033927
chr3 119237693 119237703 SREBF2 JASPAR yes 71033928
chr3 119237697 119237708 DMRT3 JASPAR yes 71033929
chr3 119237702 119237712 TEAD1 JASPAR yes 71033930
chr3 119237702 119237712 TEAD4 JASPAR yes 71033931
chr3 119237702 119237714 TEAD1 JASPAR yes 71033932
chr3 119237703 119237711 TEAD3 JASPAR yes 71033933
chr3 119237717 119237732 FOXP1 JASPAR yes 71033934
chr3 119237719 119237724 ETS2 TRANSFAC yes 71033935
chr3 119237719 119237734 FOXP1 JASPAR yes 71033936
chr3 119237722 119237733 FOXP2 JASPAR yes 71033937
chr3 119237723 119237738 FOXP1 JASPAR yes 71033938
chr3 119237724 119237735 FOXA1 JASPAR yes 71033939
chr3 119237724 119237739 FOXA1 JASPAR yes 71033940
chr3 119237725 119237737 FOXC2 JASPAR yes 71033941
chr3 119237726 119237738 FOXI1 JASPAR yes 71033942
chr3 119237726 119237746 RREB1 JASPAR yes 71033943
chr3 119237730 119237742 FOXI1 JASPAR yes 71033944
chr3 119237735 119237750 FOXP1 JASPAR yes 71033945
chr3 119237738 119237750 FOXI1 JASPAR yes 71033946
chr3 119237744 119237764 RREB1 JASPAR yes 71033947
chr3 119237763 119237769 NFIC JASPAR yes 71033948
chr3 119237790 119237794 YY1 TRANSFAC yes 71033949
chr3 119237792 119237802 NFATC3 JASPAR yes 71033950
chr3 119237793 119237800 NFATC2 JASPAR yes 71033951
SNP sites on vista42053[chr3:119237356-119237846]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 119237400 rs112915406 C CA
FOXP1 IRF1
6978581
chr3 119237627 rs114428105 A G
BARHL2
6978582
chr3 119237726 rs144104218 AAAAC A
FOXA1 FOXC2 FOXI1 FOXP1 FOXP2 RREB1
6978583
chr3 119237726 rs79498479 AAAAC A
FOXA1 FOXC2 FOXI1 FOXP1 FOXP2 RREB1
6978584
chr3 119237755 rs116633393 A G
RREB1
6978585
chr3 119237759 rs77202883 A T
RREB1
6978586
chr3 119237798 rs62264485 C A
NFATC2 NFATC3
6978587
Genes possibly regulated by vista42053[chr3:119237356-119237846]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 119148347 119187677 - TMEM39A ENSG00000176142.8 119187677 0.59 1.0 3970 50321
chr3 119187785 119213555 + POGLUT1 ENSG00000163389.6 119187785 0.6 0.99 3971 50429
chr3 119217379 119243937 + TIMMDC1 ENSG00000113845.5 119217379 0.58 0.99 3972 80023
chr3 119243140 119278449 - CD80 ENSG00000121594.7 119278449 0.98 1.0 3973 59397
chr3 119298115 119308792 + ADPRH ENSG00000144843.7 119298115 0.73 0.99 3974 39731
chr3 119316689 119348658 + PLA1A ENSG00000144837.4 119316689 0.91 1.0 3975 21157
Expression level of Genes
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miRNAs possibly regulated by vista42053[chr3:119237356-119237846]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results