EnhancerDB
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  3. vista42056[chr3:119268818-119269399]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42056[chr3:119268818-119269399]
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Tissue distribution of vista42056
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Transcription factor that possibly regulate vista42056[chr3:119268818-119269399]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 119269182 119269387 SPI1 UCSC Txn Factor no Conserved 108529976
chr3 119268840 119268855 MEF2A JASPAR yes 71034018
chr3 119268841 119268853 MEF2A JASPAR yes 71034019
chr3 119268841 119268853 MEF2D JASPAR yes 71034020
chr3 119268853 119268863 TBR1 JASPAR yes 71034021
chr3 119268853 119268864 TBX2 JASPAR yes 71034022
chr3 119268855 119268863 TBX15 JASPAR yes 71034023
chr3 119268855 119268863 TBX1 JASPAR yes 71034024
chr3 119268855 119268863 TBX4 JASPAR yes 71034025
chr3 119268855 119268863 TBX5 JASPAR yes 71034026
chr3 119268855 119268867 PKNOX2 JASPAR yes 71034027
chr3 119268862 119268876 EBF1 JASPAR yes 71034028
chr3 119268864 119268875 EBF1 JASPAR yes 71034029
chr3 119268876 119268886 NFATC3 JASPAR yes 71034030
chr3 119268878 119268885 NFATC2 JASPAR yes 71034031
chr3 119268890 119268900 ALX3 JASPAR yes 71034032
chr3 119268890 119268900 GSX2 JASPAR yes 71034033
chr3 119268890 119268900 MIXL1 JASPAR yes 71034034
chr3 119268890 119268900 MNX1 JASPAR yes 71034035
chr3 119268891 119268899 ISX JASPAR yes 71034036
chr3 119268891 119268899 LHX9 JASPAR yes 71034037
chr3 119268891 119268899 LMX1B JASPAR yes 71034038
chr3 119268891 119268899 PRRX1 JASPAR yes 71034039
chr3 119268891 119268899 RAX2 JASPAR yes 71034040
chr3 119268891 119268899 SHOX JASPAR yes 71034041
chr3 119268891 119268899 UNCX JASPAR yes 71034042
chr3 119268894 119268904 BARHL2 JASPAR yes 71034043
chr3 119268899 119268914 MEF2C JASPAR yes 71034044
chr3 119268900 119268915 MEF2A JASPAR yes 71034045
chr3 119268901 119268913 MEF2A JASPAR yes 71034046
chr3 119268901 119268913 MEF2B JASPAR yes 71034047
chr3 119268901 119268913 MEF2D JASPAR yes 71034048
chr3 119268902 119268912 MEF2A JASPAR yes 71034049
chr3 119268902 119268914 FOXI1 JASPAR yes 71034050
chr3 119268903 119268907 TEAD2 TRANSFAC yes 71034051
chr3 119268903 119268908 TBP TRANSFAC yes 71034052
chr3 119268903 119268909 TMF TRANSFAC yes 71034053
chr3 119268918 119268929 ESRRA JASPAR yes 71034054
chr3 119268918 119268929 ESRRB JASPAR yes 71034055
chr3 119268941 119268962 IRF1 JASPAR yes 71034056
chr3 119268943 119268958 STAT2 JASPAR yes 71034057
chr3 119268944 119268958 STAT1 JASPAR yes 71034058
chr3 119268945 119268955 NFATC3 JASPAR yes 71034059
chr3 119268946 119268958 YY1 JASPAR yes 71034060
chr3 119268947 119268968 IRF1 JASPAR yes 71034061
chr3 119268948 119268969 ZNF263 JASPAR yes 71034062
chr3 119268951 119268955 YY1 TRANSFAC yes 71034063
chr3 119268952 119268973 ZNF263 JASPAR yes 71034064
chr3 119268960 119268971 E2F6 JASPAR yes 71034065
chr3 119268966 119268976 SP1 JASPAR yes 71034066
chr3 119268976 119268982 NFIC JASPAR yes 71034067
chr3 119268986 119269001 PRDM1 JASPAR yes 71034068
chr3 119268993 119268997 YY1 TRANSFAC yes 71034069
chr3 119268994 119269011 RARA JASPAR yes 71034070
chr3 119269006 119269018 HLF JASPAR yes 71034071
chr3 119269006 119269018 JDP2 JASPAR yes 71034072
chr3 119269022 119269037 HNF4A JASPAR yes 71034073
chr3 119269023 119269038 HNF4G JASPAR yes 71034074
chr3 119269040 119269053 SMAD2 JASPAR yes 71034075
chr3 119269078 119269082 H1TF2 TRANSFAC yes 71034076
chr3 119269078 119269082 NFE TRANSFAC yes 71034077
chr3 119269078 119269082 SRF TRANSFAC yes 71034078
chr3 119269078 119269088 MEF2A JASPAR yes 71034079
chr3 119269086 119269099 NFKB2 JASPAR yes 71034080
chr3 119269087 119269097 REL JASPAR yes 71034081
chr3 119269087 119269098 NFKB1 JASPAR yes 71034082
chr3 119269094 119269100 MZF1 JASPAR yes 71034083
chr3 119269111 119269125 E2F7 JASPAR yes 71034084
chr3 119269130 119269134 H1TF2 TRANSFAC yes 71034085
chr3 119269130 119269134 NFE TRANSFAC yes 71034086
chr3 119269130 119269134 SRF TRANSFAC yes 71034087
chr3 119269134 119269138 YY1 TRANSFAC yes 71034088
chr3 119269149 119269159 TEAD1 JASPAR yes 71034089
chr3 119269149 119269164 RUNX2 JASPAR yes 71034090
chr3 119269159 119269173 MTF1 JASPAR yes 71034091
chr3 119269165 119269186 IRF1 JASPAR yes 71034092
chr3 119269167 119269182 IRF9 JASPAR yes 71034093
chr3 119269168 119269182 IRF7 JASPAR yes 71034094
chr3 119269168 119269182 IRF8 JASPAR yes 71034095
chr3 119269169 119269183 STAT1 JASPAR yes 71034096
chr3 119269169 119269184 PRDM1 JASPAR yes 71034097
chr3 119269169 119269184 STAT2 JASPAR yes 71034098
chr3 119269169 119269187 IRF2 JASPAR yes 71034099
chr3 119269170 119269182 IRF1 JASPAR yes 71034100
chr3 119269183 119269204 IRF1 JASPAR yes 71034101
chr3 119269186 119269200 IRF8 JASPAR yes 71034102
chr3 119269187 119269202 PRDM1 JASPAR yes 71034103
chr3 119269198 119269202 NFE TRANSFAC yes 71034104
chr3 119269198 119269203 GATA1 TRANSFAC yes 71034105
chr3 119269198 119269204 GATA3 JASPAR yes 71034106
chr3 119269199 119269214 MEF2A JASPAR yes 71034107
chr3 119269200 119269215 MEF2C JASPAR yes 71034108
chr3 119269201 119269213 MEF2A JASPAR yes 71034109
chr3 119269201 119269213 MEF2B JASPAR yes 71034110
chr3 119269201 119269213 MEF2D JASPAR yes 71034111
chr3 119269213 119269219 YY1 JASPAR yes 71034112
chr3 119269245 119269266 ZNF263 JASPAR yes 71034113
chr3 119269248 119269269 ZNF263 JASPAR yes 71034114
chr3 119269263 119269284 ZNF263 JASPAR yes 71034115
chr3 119269266 119269285 REST JASPAR yes 71034116
chr3 119269270 119269291 IRF1 JASPAR yes 71034117
chr3 119269272 119269282 MEF2A JASPAR yes 71034118
chr3 119269274 119269288 SPI1 JASPAR yes 71034119
chr3 119269274 119269289 STAT2 JASPAR yes 71034120
chr3 119269278 119269285 SPIB JASPAR yes 71034121
chr3 119269293 119269299 ETS1 JASPAR yes 71034122
chr3 119269293 119269299 SPI1 JASPAR yes 71034123
chr3 119269307 119269317 RELA JASPAR yes 71034124
chr3 119269362 119269372 MEOX2 JASPAR yes 71034125
chr3 119269362 119269378 POU4F3 JASPAR yes 71034126
chr3 119269365 119269369 YY1 TRANSFAC yes 71034127
chr3 119269368 119269372 TEAD2 TRANSFAC yes 71034128
chr3 119269368 119269373 TBP TRANSFAC yes 71034129
chr3 119269368 119269374 TMF TRANSFAC yes 71034130
chr3 119269370 119269388 E2F3 JASPAR yes 71034131
SNP sites on vista42056[chr3:119268818-119269399]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 119268832 rs34321347 T G no 6978604
chr3 119268948 rs74555346 T C
IRF1 NFATC3 STAT1 STAT2 YY1 ZNF263
6978605
chr3 119269112 rs527004 A G
E2F7
6978606
chr3 119269136 rs11415997 A AT
YY1
6978607
chr3 119269334 rs116408627 C T
SPI1
6978608
Genes possibly regulated by vista42056[chr3:119268818-119269399]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 119148347 119187677 - TMEM39A ENSG00000176142.8 119187677 0.59 1.0 3970 18859
chr3 119187785 119213555 + POGLUT1 ENSG00000163389.6 119187785 0.6 0.99 3971 18967
chr3 119217379 119243937 + TIMMDC1 ENSG00000113845.5 119217379 0.58 0.99 3972 48561
chr3 119243140 119278449 - CD80 ENSG00000121594.7 119278449 0.98 1.0 3973 90950
chr3 119298115 119308792 + ADPRH ENSG00000144843.7 119298115 0.73 0.99 3974 71284
chr3 119316689 119348658 + PLA1A ENSG00000144837.4 119316689 0.91 1.0 3975 52710
Expression level of Genes
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miRNAs possibly regulated by vista42056[chr3:119268818-119269399]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results