EnhancerDB
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  3. vista42062[chr3:119290570-119290948]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42062[chr3:119290570-119290948]
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Tissue distribution of vista42062
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Transcription factor that possibly regulate vista42062[chr3:119290570-119290948]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 119290587 119290597 NFKB1 JASPAR yes 5169519
chr3 119290587 119290597 NFKB1 JASPAR yes 71034549
chr3 119290606 119290620 MTF1 JASPAR yes 5169520
chr3 119290606 119290620 MTF1 JASPAR yes 71034550
chr3 119290645 119290659 SPI1 JASPAR yes 5169521
chr3 119290645 119290659 SPI1 JASPAR yes 71034551
chr3 119290645 119290660 STAT2 JASPAR yes 5169522
chr3 119290645 119290660 STAT2 JASPAR yes 71034552
chr3 119290652 119290666 NR2F1 JASPAR yes 5169523
chr3 119290652 119290666 NR2F1 JASPAR yes 71034553
chr3 119290683 119290694 FLI1 JASPAR yes 5169524
chr3 119290683 119290694 FLI1 JASPAR yes 71034554
chr3 119290684 119290694 GABPA JASPAR yes 5169525
chr3 119290684 119290694 GABPA JASPAR yes 71034555
chr3 119290693 119290704 NFKB1 JASPAR yes 5169526
chr3 119290693 119290704 NFKB1 JASPAR yes 71034556
chr3 119290694 119290704 NFKB1 JASPAR yes 5169527
chr3 119290694 119290704 RELA JASPAR yes 5169528
chr3 119290694 119290704 NFKB1 JASPAR yes 71034557
chr3 119290694 119290704 RELA JASPAR yes 71034558
chr3 119290694 119290705 NFKB1 JASPAR yes 5169529
chr3 119290694 119290705 NFKB1 JASPAR yes 71034559
chr3 119290695 119290705 RELA JASPAR yes 5169530
chr3 119290695 119290705 REL JASPAR yes 5169531
chr3 119290695 119290705 RELA JASPAR yes 71034560
chr3 119290695 119290705 REL JASPAR yes 71034561
chr3 119290729 119290742 NR2F1 JASPAR yes 5169532
chr3 119290729 119290742 NR2F1 JASPAR yes 71034562
chr3 119290733 119290737 ESR1 TRANSFAC yes 5169533
chr3 119290733 119290737 ESR1 TRANSFAC yes 71034563
chr3 119290737 119290752 STAT1 JASPAR yes 5169534
chr3 119290737 119290752 STAT1 JASPAR yes 71034564
chr3 119290739 119290750 STAT1 JASPAR yes 5169535
chr3 119290739 119290750 STAT3 JASPAR yes 5169536
chr3 119290739 119290750 STAT1 JASPAR yes 71034565
chr3 119290739 119290750 STAT3 JASPAR yes 71034566
chr3 119290743 119290751 FEV JASPAR yes 5169537
chr3 119290743 119290751 FEV JASPAR yes 71034567
chr3 119290770 119290778 HOXA5 JASPAR yes 5169538
chr3 119290770 119290778 HOXA5 JASPAR yes 71034568
chr3 119290778 119290784 ZNF354C JASPAR yes 5169539
chr3 119290778 119290784 ZNF354C JASPAR yes 71034569
chr3 119290799 119290810 NFKB1 JASPAR yes 5169540
chr3 119290799 119290810 NFKB1 JASPAR yes 71034570
chr3 119290857 119290863 ZNF354C JASPAR yes 5169541
chr3 119290857 119290863 ZNF354C JASPAR yes 71034571
chr3 119290857 119290867 MAX JASPAR yes 5169542
chr3 119290857 119290867 MAX JASPAR yes 71034572
chr3 119290864 119290874 RELA JASPAR yes 5169543
chr3 119290864 119290874 RELA JASPAR yes 71034573
chr3 119290864 119290875 NFKB1 JASPAR yes 5169544
chr3 119290864 119290875 NFKB1 JASPAR yes 71034574
chr3 119290916 119290936 RREB1 JASPAR yes 5169545
chr3 119290916 119290936 RREB1 JASPAR yes 71034575
chr3 119290916 119290937 IRF1 JASPAR yes 5169546
chr3 119290916 119290937 IRF1 JASPAR yes 71034576
chr3 119290920 119290935 IRF9 JASPAR yes 5169547
chr3 119290920 119290935 IRF9 JASPAR yes 71034577
chr3 119290921 119290941 RREB1 JASPAR yes 5169548
chr3 119290921 119290941 RREB1 JASPAR yes 71034578
chr3 119290921 119290942 IRF1 JASPAR yes 5169549
chr3 119290921 119290942 IRF1 JASPAR yes 71034579
chr3 119290922 119290943 IRF1 JASPAR yes 5169550
chr3 119290922 119290943 IRF1 JASPAR yes 71034580
chr3 119290923 119290938 FOXP1 JASPAR yes 5169551
chr3 119290923 119290938 FOXP1 JASPAR yes 71034581
chr3 119290923 119290943 RREB1 JASPAR yes 5169552
chr3 119290923 119290943 RREB1 JASPAR yes 71034582
chr3 119290928 119290934 TCF4 TRANSFAC yes 5169553
chr3 119290928 119290934 TCF4 TRANSFAC yes 71034583
chr3 119290928 119290943 FOXP1 JASPAR yes 5169554
chr3 119290928 119290943 FOXP1 JASPAR yes 71034584
chr3 119290928 119290948 RREB1 JASPAR yes 5169555
chr3 119290928 119290948 RREB1 JASPAR yes 71034585
chr3 119290928 119290949 IRF1 JASPAR yes 5169556
chr3 119290928 119290949 IRF1 JASPAR yes 71034586
chr3 119290929 119290950 IRF1 JASPAR yes 5169557
chr3 119290929 119290950 IRF1 JASPAR yes 71034587
chr3 119290930 119290950 RREB1 JASPAR yes 5169558
chr3 119290930 119290950 RREB1 JASPAR yes 71034588
chr3 119290935 119290941 TCF4 TRANSFAC yes 5169559
chr3 119290935 119290941 TCF4 TRANSFAC yes 71034589
chr3 119290935 119290950 FOXP1 JASPAR yes 5169560
chr3 119290935 119290950 FOXP1 JASPAR yes 71034590
chr3 119290935 119290956 IRF1 JASPAR yes 5169561
chr3 119290935 119290956 IRF1 JASPAR yes 71034591
chr3 119290942 119290948 TCF4 TRANSFAC yes 5169562
chr3 119290942 119290948 TCF4 TRANSFAC yes 71034592
SNP sites on vista42062[chr3:119290570-119290948]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 119290686 rs76066869 T A
FLI1 GABPA
6978742
chr3 119290687 rs74947407 C A
FLI1 GABPA
6978743
chr3 119290693 rs115151681 G T
FLI1 GABPA NFKB1
6978744
chr3 119290708 rs16830002 G A no 6978745
chr3 119290760 rs573533106 G C no 6978746
chr3 119290823 rs16830004 C T no 6978747
chr3 119290920 rs188622190 G A
IRF1 IRF9 RREB1
6978748
chr3 119290922 rs370392310 GTTTTTT G
IRF1 IRF9 RREB1
6978749
chr3 119290922 rs544354584 GTTTTTT G
IRF1 IRF9 RREB1
6978750
chr3 119290922 rs546415640 G GT
IRF1 IRF9 RREB1
6978751
chr3 119290922 rs58215610 G GT
IRF1 IRF9 RREB1
6978752
Genes possibly regulated by vista42062[chr3:119290570-119290948]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 119217379 119243937 + TIMMDC1 ENSG00000113845.5 119217379 0.58 0.99 3972 26809
chr3 119243140 119278449 - CD80 ENSG00000121594.7 119278449 0.98 1.0 3973 87879
chr3 119298115 119308792 + ADPRH ENSG00000144843.7 119298115 0.73 0.99 3974 92833
chr3 119316689 119348658 + PLA1A ENSG00000144837.4 119316689 0.91 1.0 3975 74259
chr3 119355304 119384171 - POPDC2 ENSG00000121577.9 119384171 0.97 0.99 3976 6777
Expression level of Genes
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miRNAs possibly regulated by vista42062[chr3:119290570-119290948]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results