EnhancerDB
  1. Home
  2. Enhancers
  3. vista42078[chr3:119436291-119436418]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42078[chr3:119436291-119436418]
Back to top
Tissue distribution of vista42078
Back to top
Transcription factor that possibly regulate vista42078[chr3:119436291-119436418]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 119436295 119436307 SRF JASPAR yes 71035318
chr3 119436296 119436300 YY1 TRANSFAC yes 71035319
chr3 119436331 119436343 TAL1 JASPAR yes 71035320
chr3 119436332 119436344 BHLHE23 JASPAR yes 71035321
chr3 119436333 119436343 BHLHE22 JASPAR yes 71035322
chr3 119436333 119436343 NEUROD2 JASPAR yes 71035323
chr3 119436333 119436343 OLIG1 JASPAR yes 71035324
chr3 119436333 119436343 OLIG2 JASPAR yes 71035325
chr3 119436333 119436343 OLIG3 JASPAR yes 71035326
chr3 119436337 119436345 FOXL1 JASPAR yes 71035327
chr3 119436347 119436351 YY1 TRANSFAC yes 71035328
chr3 119436358 119436362 TEAD2 TRANSFAC yes 71035329
chr3 119436358 119436363 TBP TRANSFAC yes 71035330
chr3 119436358 119436364 TMF TRANSFAC yes 71035331
chr3 119436380 119436387 NKX3-1 JASPAR yes 71035332
chr3 119436391 119436412 IRF1 JASPAR yes 71035333
chr3 119436392 119436413 IRF1 JASPAR yes 71035334
chr3 119436393 119436408 STAT2 JASPAR yes 71035335
chr3 119436393 119436414 IRF1 JASPAR yes 71035336
chr3 119436394 119436415 IRF1 JASPAR yes 71035337
chr3 119436395 119436416 IRF1 JASPAR yes 71035338
chr3 119436396 119436411 FOXP1 JASPAR yes 71035339
chr3 119436396 119436417 IRF1 JASPAR yes 71035340
chr3 119436397 119436412 FOXP1 JASPAR yes 71035341
chr3 119436398 119436413 FOXP1 JASPAR yes 71035342
chr3 119436399 119436414 FOXP1 JASPAR yes 71035343
chr3 119436400 119436415 FOXP1 JASPAR yes 71035344
chr3 119436401 119436416 FOXP1 JASPAR yes 71035345
chr3 119436402 119436417 FOXP1 JASPAR yes 71035346
chr3 119436403 119436418 FOXP1 JASPAR yes 71035347
SNP sites on vista42078[chr3:119436291-119436418]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 119436395 rs68006617 T TG
IRF1 STAT2
6979397
chr3 119436395 rs753750290 T TG
IRF1 STAT2
6979398
chr3 119436416 rs541608477 T C
FOXP1 IRF1
6979399
Genes possibly regulated by vista42078[chr3:119436291-119436418]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 119355304 119384171 - POPDC2 ENSG00000121577.9 119384171 0.97 0.99 3976 47880
chr3 119373360 119396301 - COX17 ENSG00000138495.2 119396301 0.88 0.99 3977 60010
chr3 119421869 119485949 + MAATS1 ENSG00000183833.12 119421869 0.8 0.99 3978 85578
chr3 119499331 119537332 + NR1I2 ENSG00000144852.12 119499331 0.99 1.0 3979 37087
Expression level of Genes
Back to top
miRNAs possibly regulated by vista42078[chr3:119436291-119436418]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results