EnhancerDB
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  3. vista42085[chr3:119809073-119809433]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42085[chr3:119809073-119809433]
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Tissue distribution of vista42085
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Transcription factor that possibly regulate vista42085[chr3:119809073-119809433]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 119809070 119809085 FOXP1 JASPAR yes 5192360
chr3 119809070 119809085 FOXP1 JASPAR yes 71035616
chr3 119809072 119809087 FOXP1 JASPAR yes 5192361
chr3 119809072 119809087 MEF2C JASPAR yes 5192362
chr3 119809072 119809087 FOXP1 JASPAR yes 71035617
chr3 119809072 119809087 MEF2C JASPAR yes 71035618
chr3 119809074 119809078 TEAD2 TRANSFAC yes 5192363
chr3 119809074 119809078 TEAD2 TRANSFAC yes 71035619
chr3 119809074 119809079 TBP TRANSFAC yes 5192364
chr3 119809074 119809079 TBP TRANSFAC yes 71035620
chr3 119809074 119809080 TFIID TRANSFAC yes 5192365
chr3 119809074 119809080 TFIID TRANSFAC yes 71035621
chr3 119809074 119809089 FOXP1 JASPAR yes 5192366
chr3 119809074 119809089 FOXP1 JASPAR yes 71035622
chr3 119809075 119809090 FOXP1 JASPAR yes 5192367
chr3 119809075 119809090 FOXP1 JASPAR yes 71035623
chr3 119809075 119809096 IRF1 JASPAR yes 5192368
chr3 119809075 119809096 IRF1 JASPAR yes 71035624
chr3 119809076 119809082 TBP TRANSFAC yes 5192369
chr3 119809076 119809082 TBP TRANSFAC yes 71035625
chr3 119809076 119809091 FOXP1 JASPAR yes 5192370
chr3 119809076 119809091 FOXP1 JASPAR yes 71035626
chr3 119809076 119809097 IRF1 JASPAR yes 5192371
chr3 119809076 119809097 IRF1 JASPAR yes 71035627
chr3 119809077 119809092 FOXP1 JASPAR yes 5192372
chr3 119809077 119809092 FOXP1 JASPAR yes 71035628
chr3 119809097 119809103 LEF1 TRANSFAC yes 5192373
chr3 119809097 119809103 TCF4 TRANSFAC yes 5192374
chr3 119809097 119809103 LEF1 TRANSFAC yes 71035629
chr3 119809097 119809103 TCF4 TRANSFAC yes 71035630
chr3 119809109 119809121 POU3F1 JASPAR yes 5192375
chr3 119809109 119809121 POU3F1 JASPAR yes 71035631
chr3 119809110 119809114 YY1 TRANSFAC yes 5192376
chr3 119809110 119809114 YY1 TRANSFAC yes 71035632
chr3 119809110 119809122 POU2F1 JASPAR yes 5192377
chr3 119809110 119809122 POU2F1 JASPAR yes 71035633
chr3 119809111 119809120 POU5F1B JASPAR yes 5192378
chr3 119809111 119809120 POU5F1B JASPAR yes 71035634
chr3 119809146 119809150 TEAD2 TRANSFAC yes 5192379
chr3 119809146 119809150 TEAD2 TRANSFAC yes 71035635
chr3 119809146 119809151 TBP TRANSFAC yes 5192380
chr3 119809146 119809151 TBP TRANSFAC yes 71035636
chr3 119809146 119809152 TMF TRANSFAC yes 5192381
chr3 119809146 119809152 TMF TRANSFAC yes 71035637
chr3 119809188 119809196 BARX1 JASPAR yes 5192382
chr3 119809188 119809196 BSX JASPAR yes 5192383
chr3 119809188 119809196 ISL2 JASPAR yes 5192384
chr3 119809188 119809196 LMX1B JASPAR yes 5192385
chr3 119809188 119809196 MSX1 JASPAR yes 5192386
chr3 119809188 119809196 MSX2 JASPAR yes 5192387
chr3 119809188 119809196 BARX1 JASPAR yes 71035638
chr3 119809188 119809196 BSX JASPAR yes 71035639
chr3 119809188 119809196 ISL2 JASPAR yes 71035640
chr3 119809188 119809196 LMX1B JASPAR yes 71035641
chr3 119809188 119809196 MSX1 JASPAR yes 71035642
chr3 119809188 119809196 MSX2 JASPAR yes 71035643
chr3 119809188 119809200 MEF2B JASPAR yes 5192388
chr3 119809188 119809200 MEF2D JASPAR yes 5192389
chr3 119809188 119809200 MEF2B JASPAR yes 71035644
chr3 119809188 119809200 MEF2D JASPAR yes 71035645
chr3 119809202 119809209 SPI1 JASPAR yes 5192390
chr3 119809202 119809209 SPI1 JASPAR yes 71035646
chr3 119809225 119809228 MYB TRANSFAC yes 5192391
chr3 119809225 119809228 MYB TRANSFAC yes 71035647
chr3 119809229 119809232 MYB TRANSFAC yes 5192392
chr3 119809229 119809232 MYB TRANSFAC yes 71035648
chr3 119809230 119809240 MYF6 JASPAR yes 5192393
chr3 119809230 119809240 MYF6 JASPAR yes 71035649
chr3 119809235 119809239 NFE TRANSFAC yes 5192394
chr3 119809235 119809239 NFE TRANSFAC yes 71035650
chr3 119809265 119809277 HNF1B JASPAR yes 5192395
chr3 119809265 119809277 HNF1B JASPAR yes 71035651
chr3 119809275 119809289 IRF7 JASPAR yes 5192396
chr3 119809275 119809289 IRF7 JASPAR yes 71035652
chr3 119809292 119809306 RXRB JASPAR yes 5192397
chr3 119809292 119809306 RXRG JASPAR yes 5192398
chr3 119809292 119809306 RXRB JASPAR yes 71035653
chr3 119809292 119809306 RXRG JASPAR yes 71035654
chr3 119809292 119809307 NR2C2 JASPAR yes 5192399
chr3 119809292 119809307 NR2C2 JASPAR yes 71035655
chr3 119809298 119809308 SREBF1 JASPAR yes 5192400
chr3 119809298 119809308 SREBF1 JASPAR yes 71035656
chr3 119809298 119809316 MAFF JASPAR yes 5192401
chr3 119809298 119809316 MAFF JASPAR yes 71035657
chr3 119809299 119809314 MAFK JASPAR yes 5192402
chr3 119809299 119809314 MAFK JASPAR yes 71035658
chr3 119809303 119809314 NRL JASPAR yes 5192403
chr3 119809303 119809314 NRL JASPAR yes 71035659
chr3 119809325 119809329 YY1 TRANSFAC yes 5192404
chr3 119809325 119809329 YY1 TRANSFAC yes 71035660
chr3 119809329 119809337 BARX1 JASPAR yes 5192405
chr3 119809329 119809337 BARX1 JASPAR yes 71035661
chr3 119809332 119809341 SRY JASPAR yes 5192406
chr3 119809332 119809341 SRY JASPAR yes 71035662
chr3 119809334 119809337 MYB TRANSFAC yes 5192407
chr3 119809334 119809337 MYB TRANSFAC yes 71035663
chr3 119809340 119809344 TEAD2 TRANSFAC yes 5192408
chr3 119809340 119809344 TEAD2 TRANSFAC yes 71035664
chr3 119809342 119809345 MYB TRANSFAC yes 5192409
chr3 119809342 119809345 MYB TRANSFAC yes 71035665
chr3 119809371 119809374 MYB TRANSFAC yes 5192410
chr3 119809371 119809374 MYB TRANSFAC yes 71035666
chr3 119809380 119809395 MEF2A JASPAR yes 5192411
chr3 119809380 119809395 MEF2A JASPAR yes 71035667
chr3 119809381 119809396 MEF2C JASPAR yes 5192412
chr3 119809381 119809396 MEF2C JASPAR yes 71035668
chr3 119809382 119809394 MEF2A JASPAR yes 5192413
chr3 119809382 119809394 MEF2B JASPAR yes 5192414
chr3 119809382 119809394 MEF2D JASPAR yes 5192415
chr3 119809382 119809394 MEF2A JASPAR yes 71035669
chr3 119809382 119809394 MEF2B JASPAR yes 71035670
chr3 119809382 119809394 MEF2D JASPAR yes 71035671
chr3 119809383 119809393 MEF2A JASPAR yes 5192416
chr3 119809383 119809393 MEF2A JASPAR yes 71035672
chr3 119809384 119809388 YY1 TRANSFAC yes 5192417
chr3 119809384 119809388 YY1 TRANSFAC yes 71035673
chr3 119809390 119809393 MYB TRANSFAC yes 5192418
chr3 119809390 119809393 MYB TRANSFAC yes 71035674
chr3 119809403 119809414 TBX20 JASPAR yes 5192419
chr3 119809403 119809414 TBX20 JASPAR yes 71035675
chr3 119809415 119809425 NKX2-3 JASPAR yes 5192420
chr3 119809415 119809425 NKX2-3 JASPAR yes 71035676
chr3 119809416 119809425 NKX2-8 JASPAR yes 5192421
chr3 119809416 119809425 NKX2-8 JASPAR yes 71035677
SNP sites on vista42085[chr3:119809073-119809433]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 119809077 rs55859010 TA T
FOXP1 IRF1 MEF2C TBP TEAD2 TFIID
6980678
chr3 119809077 rs796308346 TA T
FOXP1 IRF1 MEF2C TBP TEAD2 TFIID
6980679
chr3 119809157 rs72971020 A T no 6980680
chr3 119809284 rs115599600 G T
IRF7
6980681
chr3 119809326 rs114214246 C A
YY1
6980682
chr3 119809401 rs76748801 C G no 6980683
Genes possibly regulated by vista42085[chr3:119809073-119809433]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 119540170 119813264 - GSK3B ENSG00000082701.10 119813264 0.7 1.0 3980 96169
Expression level of Genes
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miRNAs possibly regulated by vista42085[chr3:119809073-119809433]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results