EnhancerDB
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  3. vista42096[chr3:120277715-120278240]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42096[chr3:120277715-120278240]
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Tissue distribution of vista42096
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Transcription factor that possibly regulate vista42096[chr3:120277715-120278240]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 120277698 120277995 RUNX3 UCSC Txn Factor no Conserved 108530027
chr3 120277709 120278153 CTCF UCSC Txn Factor no Conserved 108530028
chr3 120277749 120278059 RAD21 UCSC Txn Factor no Conserved 108530029
chr3 120277749 120278060 SMC3 UCSC Txn Factor no Conserved 108530030
chr3 120277779 120278425 ATF2 UCSC Txn Factor no Conserved 108530031
chr3 120277810 120278134 CEBPB UCSC Txn Factor no Conserved 108530032
chr3 120277776 120277791 NR2C2 JASPAR yes 5215682
chr3 120277776 120277791 NR2C2 JASPAR yes 71036151
chr3 120277777 120277791 RXRB JASPAR yes 5215683
chr3 120277777 120277791 RXRG JASPAR yes 5215684
chr3 120277777 120277791 RXRB JASPAR yes 71036152
chr3 120277777 120277791 RXRG JASPAR yes 71036153
chr3 120277785 120277805 ESR1 JASPAR yes 5215685
chr3 120277785 120277805 ESR1 JASPAR yes 71036154
chr3 120277790 120277795 SP1 TRANSFAC yes 5215686
chr3 120277790 120277795 SP1 TRANSFAC yes 71036155
chr3 120277794 120277798 H4TF2 TRANSFAC yes 5215687
chr3 120277794 120277798 H4TF2 TRANSFAC yes 71036156
chr3 120277799 120277807 RHOXF1 JASPAR yes 5215688
chr3 120277799 120277807 RHOXF1 JASPAR yes 71036157
chr3 120277799 120277808 PITX3 JASPAR yes 5215689
chr3 120277799 120277808 PITX3 JASPAR yes 71036158
chr3 120277814 120277826 IRF1 JASPAR yes 5215690
chr3 120277814 120277826 IRF1 JASPAR yes 71036159
chr3 120277821 120277842 IRF1 JASPAR yes 5215691
chr3 120277821 120277842 IRF1 JASPAR yes 71036160
chr3 120277823 120277838 IRF9 JASPAR yes 5215692
chr3 120277823 120277838 IRF9 JASPAR yes 71036161
chr3 120277833 120277842 RUNX2 JASPAR yes 5215693
chr3 120277833 120277842 RUNX2 JASPAR yes 71036162
chr3 120277833 120277843 RUNX3 JASPAR yes 5215694
chr3 120277833 120277843 RUNX3 JASPAR yes 71036163
chr3 120277833 120277844 RUNX1 JASPAR yes 5215695
chr3 120277833 120277844 RUNX1 JASPAR yes 71036164
chr3 120277846 120277855 SOX9 JASPAR yes 5215696
chr3 120277846 120277855 SOX9 JASPAR yes 71036165
chr3 120277847 120277862 FOXP1 JASPAR yes 5215697
chr3 120277847 120277862 FOXP1 JASPAR yes 71036166
chr3 120277848 120277857 SRY JASPAR yes 5215698
chr3 120277848 120277857 SRY JASPAR yes 71036167
chr3 120277852 120277858 TCF4 TRANSFAC yes 5215699
chr3 120277852 120277858 TCF4 TRANSFAC yes 71036168
chr3 120277873 120277882 TFAP2A JASPAR yes 5215700
chr3 120277873 120277882 TFAP2A JASPAR yes 71036169
chr3 120277875 120277884 THAP1 JASPAR yes 5215701
chr3 120277875 120277884 THAP1 JASPAR yes 71036170
chr3 120277878 120277882 LFA1 TRANSFAC yes 5215702
chr3 120277878 120277882 LFA1 TRANSFAC yes 71036171
chr3 120277914 120277933 CTCF JASPAR yes 5215703
chr3 120277914 120277933 CTCF JASPAR yes 71036172
chr3 120277917 120277931 ZIC1 JASPAR yes 5215704
chr3 120277917 120277931 ZIC1 JASPAR yes 71036173
chr3 120277917 120277932 ZIC3 JASPAR yes 5215705
chr3 120277917 120277932 ZIC4 JASPAR yes 5215706
chr3 120277917 120277932 ZIC3 JASPAR yes 71036174
chr3 120277917 120277932 ZIC4 JASPAR yes 71036175
chr3 120277920 120277934 PLAG1 JASPAR yes 5215707
chr3 120277920 120277934 PLAG1 JASPAR yes 71036176
chr3 120277922 120277943 REST JASPAR yes 5215708
chr3 120277922 120277943 REST JASPAR yes 71036177
chr3 120277946 120277951 MYC TRANSFAC yes 5215709
chr3 120277946 120277951 MYC TRANSFAC yes 71036178
chr3 120277966 120277977 PHOX2A JASPAR yes 5215710
chr3 120277966 120277977 PROP1 JASPAR yes 5215711
chr3 120277966 120277977 PHOX2A JASPAR yes 71036179
chr3 120277966 120277977 PROP1 JASPAR yes 71036180
chr3 120277971 120277982 NFIL3 JASPAR yes 5215712
chr3 120277971 120277982 NFIL3 JASPAR yes 71036181
chr3 120277971 120277985 ATF7 JASPAR yes 5215713
chr3 120277971 120277985 ATF7 JASPAR yes 71036182
chr3 120277972 120277984 DBP JASPAR yes 5215714
chr3 120277972 120277984 HLF JASPAR yes 5215715
chr3 120277972 120277984 JDP2 JASPAR yes 5215716
chr3 120277972 120277984 TEF JASPAR yes 5215717
chr3 120277972 120277984 DBP JASPAR yes 71036183
chr3 120277972 120277984 HLF JASPAR yes 71036184
chr3 120277972 120277984 JDP2 JASPAR yes 71036185
chr3 120277972 120277984 TEF JASPAR yes 71036186
chr3 120277973 120277983 CEBPB JASPAR yes 5215718
chr3 120277973 120277983 CEBPD JASPAR yes 5215719
chr3 120277973 120277983 CEBPE JASPAR yes 5215720
chr3 120277973 120277983 CEBPG JASPAR yes 5215721
chr3 120277973 120277983 CEBPB JASPAR yes 71036187
chr3 120277973 120277983 CEBPD JASPAR yes 71036188
chr3 120277973 120277983 CEBPE JASPAR yes 71036189
chr3 120277973 120277983 CEBPG JASPAR yes 71036190
chr3 120277974 120277982 GMEB2 JASPAR yes 5215722
chr3 120277974 120277982 GMEB2 JASPAR yes 71036191
chr3 120277974 120277985 NFIL3 JASPAR yes 5215723
chr3 120277974 120277985 NFIL3 JASPAR yes 71036192
chr3 120278003 120278007 YY1 TRANSFAC yes 5215724
chr3 120278003 120278007 YY1 TRANSFAC yes 71036193
chr3 120278003 120278016 POU2F2 JASPAR yes 5215725
chr3 120278003 120278016 POU2F2 JASPAR yes 71036194
chr3 120278011 120278015 YY1 TRANSFAC yes 5215726
chr3 120278011 120278015 YY1 TRANSFAC yes 71036195
chr3 120278013 120278028 FOXA1 JASPAR yes 5215727
chr3 120278013 120278028 FOXA1 JASPAR yes 71036196
chr3 120278014 120278026 FOXI1 JASPAR yes 5215728
chr3 120278014 120278026 FOXI1 JASPAR yes 71036197
chr3 120278014 120278029 FOXP1 JASPAR yes 5215729
chr3 120278014 120278029 FOXP1 JASPAR yes 71036198
chr3 120278015 120278027 FOXC2 JASPAR yes 5215730
chr3 120278015 120278027 FOXC2 JASPAR yes 71036199
chr3 120278015 120278029 ONECUT2 JASPAR yes 5215731
chr3 120278015 120278029 ONECUT3 JASPAR yes 5215732
chr3 120278015 120278029 ONECUT2 JASPAR yes 71036200
chr3 120278015 120278029 ONECUT3 JASPAR yes 71036201
chr3 120278016 120278027 FOXB1 JASPAR yes 5215733
chr3 120278016 120278027 FOXC1 JASPAR yes 5215734
chr3 120278016 120278027 FOXB1 JASPAR yes 71036202
chr3 120278016 120278027 FOXC1 JASPAR yes 71036203
chr3 120278017 120278021 YY1 TRANSFAC yes 5215735
chr3 120278017 120278021 YY1 TRANSFAC yes 71036204
chr3 120278019 120278035 POU4F2 JASPAR yes 5215736
chr3 120278019 120278035 POU4F3 JASPAR yes 5215737
chr3 120278019 120278035 POU4F2 JASPAR yes 71036205
chr3 120278019 120278035 POU4F3 JASPAR yes 71036206
chr3 120278021 120278025 YY1 TRANSFAC yes 5215738
chr3 120278021 120278025 YY1 TRANSFAC yes 71036207
chr3 120278021 120278035 POU4F1 JASPAR yes 5215739
chr3 120278021 120278035 POU4F1 JASPAR yes 71036208
chr3 120278021 120278036 FOXP1 JASPAR yes 5215740
chr3 120278021 120278036 FOXP1 JASPAR yes 71036209
chr3 120278024 120278039 FOXA1 JASPAR yes 5215741
chr3 120278024 120278039 FOXA1 JASPAR yes 71036210
chr3 120278025 120278037 FOXI1 JASPAR yes 5215742
chr3 120278025 120278037 FOXI1 JASPAR yes 71036211
chr3 120278025 120278040 FOXP1 JASPAR yes 5215743
chr3 120278025 120278040 FOXP1 JASPAR yes 71036212
chr3 120278026 120278038 FOXC2 JASPAR yes 5215744
chr3 120278026 120278038 FOXC2 JASPAR yes 71036213
chr3 120278026 120278040 FOXF2 JASPAR yes 5215745
chr3 120278026 120278040 ONECUT2 JASPAR yes 5215746
chr3 120278026 120278040 ONECUT3 JASPAR yes 5215747
chr3 120278026 120278040 FOXF2 JASPAR yes 71036214
chr3 120278026 120278040 ONECUT2 JASPAR yes 71036215
chr3 120278026 120278040 ONECUT3 JASPAR yes 71036216
chr3 120278027 120278038 FOXB1 JASPAR yes 5215748
chr3 120278027 120278038 FOXC1 JASPAR yes 5215749
chr3 120278027 120278038 FOXB1 JASPAR yes 71036217
chr3 120278027 120278038 FOXC1 JASPAR yes 71036218
chr3 120278028 120278032 YY1 TRANSFAC yes 5215750
chr3 120278028 120278032 YY1 TRANSFAC yes 71036219
chr3 120278028 120278043 MEF2A JASPAR yes 5215751
chr3 120278028 120278043 MEF2A JASPAR yes 71036220
chr3 120278029 120278044 MEF2C JASPAR yes 5215752
chr3 120278029 120278044 MEF2C JASPAR yes 71036221
chr3 120278032 120278036 YY1 TRANSFAC yes 5215753
chr3 120278032 120278036 YY1 TRANSFAC yes 71036222
chr3 120278040 120278044 YY1 TRANSFAC yes 5215754
chr3 120278040 120278044 YY1 TRANSFAC yes 71036223
chr3 120278074 120278078 NFE TRANSFAC yes 5215755
chr3 120278074 120278078 NFE TRANSFAC yes 71036224
chr3 120278105 120278111 NFIC JASPAR yes 5215756
chr3 120278105 120278111 NFIC JASPAR yes 71036225
chr3 120278110 120278124 NR2F1 JASPAR yes 5215757
chr3 120278110 120278124 NR2F1 JASPAR yes 71036226
chr3 120278111 120278115 H4TF2 TRANSFAC yes 5215758
chr3 120278111 120278115 H4TF2 TRANSFAC yes 71036227
chr3 120278126 120278135 THAP1 JASPAR yes 5215759
chr3 120278126 120278135 THAP1 JASPAR yes 71036228
chr3 120278129 120278133 LFA1 TRANSFAC yes 5215760
chr3 120278129 120278133 LFA1 TRANSFAC yes 71036229
chr3 120278144 120278154 SP1 JASPAR yes 5215761
chr3 120278144 120278154 SP1 JASPAR yes 71036230
chr3 120278183 120278187 YY1 TRANSFAC yes 5215762
chr3 120278183 120278187 YY1 TRANSFAC yes 71036231
chr3 120278191 120278201 MAX JASPAR yes 5215763
chr3 120278191 120278201 MAX JASPAR yes 71036232
chr3 120278191 120278203 HES5 JASPAR yes 5215764
chr3 120278191 120278203 HES7 JASPAR yes 5215765
chr3 120278191 120278203 HES5 JASPAR yes 71036233
chr3 120278191 120278203 HES7 JASPAR yes 71036234
chr3 120278192 120278202 BHLHE40 JASPAR yes 5215766
chr3 120278192 120278202 BHLHE41 JASPAR yes 5215767
chr3 120278192 120278202 CLOCK JASPAR yes 5215768
chr3 120278192 120278202 HEY1 JASPAR yes 5215769
chr3 120278192 120278202 HEY2 JASPAR yes 5215770
chr3 120278192 120278202 MAX JASPAR yes 5215771
chr3 120278192 120278202 MLXIPL JASPAR yes 5215772
chr3 120278192 120278202 MLX JASPAR yes 5215773
chr3 120278192 120278202 MNT JASPAR yes 5215774
chr3 120278192 120278202 TFE3 JASPAR yes 5215775
chr3 120278192 120278202 TFEB JASPAR yes 5215776
chr3 120278192 120278202 TFEC JASPAR yes 5215777
chr3 120278192 120278202 BHLHE40 JASPAR yes 71036235
chr3 120278192 120278202 BHLHE41 JASPAR yes 71036236
chr3 120278192 120278202 CLOCK JASPAR yes 71036237
chr3 120278192 120278202 HEY1 JASPAR yes 71036238
chr3 120278192 120278202 HEY2 JASPAR yes 71036239
chr3 120278192 120278202 MAX JASPAR yes 71036240
chr3 120278192 120278202 MLXIPL JASPAR yes 71036241
chr3 120278192 120278202 MLX JASPAR yes 71036242
chr3 120278192 120278202 MNT JASPAR yes 71036243
chr3 120278192 120278202 TFE3 JASPAR yes 71036244
chr3 120278192 120278202 TFEB JASPAR yes 71036245
chr3 120278192 120278202 TFEC JASPAR yes 71036246
chr3 120278194 120278199 MYC TRANSFAC yes 5215778
chr3 120278194 120278199 USF1 TRANSFAC yes 5215779
chr3 120278194 120278199 USF2 TRANSFAC yes 5215780
chr3 120278194 120278199 MYC TRANSFAC yes 71036247
chr3 120278194 120278199 USF1 TRANSFAC yes 71036248
chr3 120278194 120278199 USF2 TRANSFAC yes 71036249
chr3 120278206 120278212 SOX10 JASPAR yes 5215781
chr3 120278206 120278212 SOX10 JASPAR yes 71036250
chr3 120278217 120278223 ETS1 JASPAR yes 5215782
chr3 120278217 120278223 ETS1 JASPAR yes 71036251
chr3 120278218 120278228 REL JASPAR yes 5215783
chr3 120278218 120278228 REL JASPAR yes 71036252
chr3 120278221 120278235 PLAG1 JASPAR yes 5215784
chr3 120278221 120278235 PLAG1 JASPAR yes 71036253
chr3 120278233 120278238 H4TF1 TRANSFAC yes 5215785
chr3 120278233 120278238 H4TF1 TRANSFAC yes 71036254
chr3 120278233 120278251 IRF2 JASPAR yes 5215786
chr3 120278233 120278251 IRF2 JASPAR yes 71036255
chr3 120278238 120278242 YY1 TRANSFAC yes 5215787
chr3 120278238 120278242 YY1 TRANSFAC yes 71036256
SNP sites on vista42096[chr3:120277715-120278240]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 120277718 rs805011 A G
CTCF RUNX3
6982716
chr3 120277720 rs142523560 T G
CTCF RUNX3
6982717
chr3 120277803 rs150923102 A C
ATF2 CTCF ESR1 PITX3 RAD21 RHOXF1 RUNX3 SMC3
6982718
chr3 120277889 rs141104011 C G
ATF2 CEBPB CTCF RAD21 RUNX3 SMC3
6982719
chr3 120277911 rs376595976 G A,C
ATF2 CEBPB CTCF RAD21 RUNX3 SMC3
6982720
chr3 120277916 rs61797640 A T
ATF2 CEBPB CTCF RAD21 RUNX3 SMC3
6982721
chr3 120278046 rs11357792 TC T
ATF2 CEBPB CTCF RAD21 SMC3
6982722
chr3 120278046 rs397877902 TC T
ATF2 CEBPB CTCF RAD21 SMC3
6982723
chr3 120278179 rs11454750 C CT
ATF2
6982724
chr3 120278179 rs386397755 C CT
ATF2
6982725
chr3 120278181 rs550145931 G A
ATF2
6982726
Genes possibly regulated by vista42096[chr3:120277715-120278240]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 120315156 120321347 + NDUFB4 ENSG00000065518.7 120315156 0.75 0.99 3984 63084
Expression level of Genes
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miRNAs possibly regulated by vista42096[chr3:120277715-120278240]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results