EnhancerDB
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  3. vista42099[chr3:120344562-120344833]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42099[chr3:120344562-120344833]
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Tissue distribution of vista42099
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Transcription factor that possibly regulate vista42099[chr3:120344562-120344833]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 120344552 120344563 FOXA1 JASPAR yes 5220504
chr3 120344552 120344563 FOXA1 JASPAR yes 71036359
chr3 120344554 120344567 SMAD2 JASPAR yes 5220505
chr3 120344554 120344567 SMAD2 JASPAR yes 71036360
chr3 120344557 120344567 TBR1 JASPAR yes 5220506
chr3 120344557 120344567 TBR1 JASPAR yes 71036361
chr3 120344558 120344568 TBX21 JASPAR yes 5220507
chr3 120344558 120344568 TBX21 JASPAR yes 71036362
chr3 120344559 120344567 MGA JASPAR yes 5220508
chr3 120344559 120344567 TBX15 JASPAR yes 5220509
chr3 120344559 120344567 TBX1 JASPAR yes 5220510
chr3 120344559 120344567 TBX4 JASPAR yes 5220511
chr3 120344559 120344567 TBX5 JASPAR yes 5220512
chr3 120344559 120344567 MGA JASPAR yes 71036363
chr3 120344559 120344567 TBX15 JASPAR yes 71036364
chr3 120344559 120344567 TBX1 JASPAR yes 71036365
chr3 120344559 120344567 TBX4 JASPAR yes 71036366
chr3 120344559 120344567 TBX5 JASPAR yes 71036367
chr3 120344559 120344568 ZEB1 JASPAR yes 5220513
chr3 120344559 120344568 ZEB1 JASPAR yes 71036368
chr3 120344559 120344571 PKNOX1 JASPAR yes 5220514
chr3 120344559 120344571 TGIF1 JASPAR yes 5220515
chr3 120344559 120344571 PKNOX1 JASPAR yes 71036369
chr3 120344559 120344571 TGIF1 JASPAR yes 71036370
chr3 120344559 120344572 ZBTB18 JASPAR yes 5220516
chr3 120344559 120344572 ZBTB18 JASPAR yes 71036371
chr3 120344560 120344570 FIGLA JASPAR yes 5220517
chr3 120344560 120344570 ID4 JASPAR yes 5220518
chr3 120344560 120344570 TCF3 JASPAR yes 5220519
chr3 120344560 120344570 TCF4 JASPAR yes 5220520
chr3 120344560 120344570 FIGLA JASPAR yes 71036372
chr3 120344560 120344570 ID4 JASPAR yes 71036373
chr3 120344560 120344570 TCF3 JASPAR yes 71036374
chr3 120344560 120344570 TCF4 JASPAR yes 71036375
chr3 120344561 120344570 SNAI2 JASPAR yes 5220521
chr3 120344561 120344570 SNAI2 JASPAR yes 71036376
chr3 120344562 120344567 USF2 TRANSFAC yes 5220522
chr3 120344562 120344567 USF2 TRANSFAC yes 71036377
chr3 120344568 120344589 LUN1 TRANSFAC yes 5220523
chr3 120344568 120344589 LUN1 TRANSFAC yes 71036378
chr3 120344585 120344599 PLAG1 JASPAR yes 5220524
chr3 120344585 120344599 PLAG1 JASPAR yes 71036379
chr3 120344592 120344600 TBX15 JASPAR yes 5220525
chr3 120344592 120344600 TBX15 JASPAR yes 71036380
chr3 120344592 120344603 E2F6 JASPAR yes 5220526
chr3 120344592 120344603 E2F6 JASPAR yes 71036381
chr3 120344593 120344598 SP1 TRANSFAC yes 5220527
chr3 120344593 120344598 SP1 TRANSFAC yes 71036382
chr3 120344598 120344613 AR JASPAR yes 5220528
chr3 120344598 120344613 AR JASPAR yes 71036383
chr3 120344598 120344616 ESR2 JASPAR yes 5220529
chr3 120344598 120344616 ESR2 JASPAR yes 71036384
chr3 120344599 120344619 ESR1 JASPAR yes 5220530
chr3 120344599 120344619 ESR1 JASPAR yes 71036385
chr3 120344663 120344678 FOXP1 JASPAR yes 5220531
chr3 120344663 120344678 FOXP1 JASPAR yes 71036386
chr3 120344664 120344680 POU4F2 JASPAR yes 5220532
chr3 120344664 120344680 POU4F2 JASPAR yes 71036387
chr3 120344669 120344675 TBP TRANSFAC yes 5220533
chr3 120344669 120344675 TBP TRANSFAC yes 71036388
chr3 120344674 120344686 NHLH1 JASPAR yes 5220534
chr3 120344674 120344686 NHLH1 JASPAR yes 71036389
chr3 120344675 120344685 TFAP4 JASPAR yes 5220535
chr3 120344675 120344685 TFAP4 JASPAR yes 71036390
chr3 120344689 120344699 SREBF1 JASPAR yes 5220536
chr3 120344689 120344699 SREBF1 JASPAR yes 71036391
chr3 120344690 120344698 MGA JASPAR yes 5220537
chr3 120344690 120344698 MGA JASPAR yes 71036392
chr3 120344712 120344723 BATF JASPAR yes 5220538
chr3 120344712 120344723 BATF JASPAR yes 71036393
chr3 120344726 120344737 E2F6 JASPAR yes 5220539
chr3 120344726 120344737 E2F6 JASPAR yes 71036394
chr3 120344727 120344732 SP1 TRANSFAC yes 5220540
chr3 120344727 120344732 SP1 TRANSFAC yes 71036395
chr3 120344814 120344824 SP1 JASPAR yes 71036396
SNP sites on vista42099[chr3:120344562-120344833]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 120344619 rs139080957 C A
ESR1
6983142
chr3 120344620 rs576046175 G A no 6983143
chr3 120344654 rs142991682 C T no 6983144
chr3 120344680 rs371114172 G T
NHLH1 POU4F2 TFAP4
6983145
chr3 120344788 rs191097349 G A no 6983146
Genes possibly regulated by vista42099[chr3:120344562-120344833]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 120315156 120321347 + NDUFB4 ENSG00000065518.7 120315156 0.75 0.99 3984 70594
chr3 120347020 120401418 - HGD ENSG00000113924.7 120401418 0.98 0.98 3985 43415
Expression level of Genes
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miRNAs possibly regulated by vista42099[chr3:120344562-120344833]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results