EnhancerDB
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  3. vista421[chr1:12717632-12717976]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista421[chr1:12717632-12717976]
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Tissue distribution of vista421
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Transcription factor that possibly regulate vista421[chr1:12717632-12717976]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12717629 12717639 MAX JASPAR yes 26842793
chr1 12717629 12717639 MAX JASPAR yes 118233761
chr1 12717629 12717641 HES5 JASPAR yes 26842794
chr1 12717629 12717641 HES7 JASPAR yes 26842795
chr1 12717629 12717641 HES5 JASPAR yes 118233762
chr1 12717629 12717641 HES7 JASPAR yes 118233763
chr1 12717630 12717640 BHLHE40 JASPAR yes 26842796
chr1 12717630 12717640 BHLHE41 JASPAR yes 26842797
chr1 12717630 12717640 CLOCK JASPAR yes 26842798
chr1 12717630 12717640 HEY1 JASPAR yes 26842799
chr1 12717630 12717640 HEY2 JASPAR yes 26842800
chr1 12717630 12717640 MAX JASPAR yes 26842801
chr1 12717630 12717640 BHLHE40 JASPAR yes 118233764
chr1 12717630 12717640 BHLHE41 JASPAR yes 118233765
chr1 12717630 12717640 CLOCK JASPAR yes 118233766
chr1 12717630 12717640 HEY1 JASPAR yes 118233767
chr1 12717630 12717640 HEY2 JASPAR yes 118233768
chr1 12717630 12717640 MAX JASPAR yes 118233769
chr1 12717632 12717637 MYC TRANSFAC yes 26842802
chr1 12717632 12717637 USF1 TRANSFAC yes 26842803
chr1 12717632 12717637 USF2 TRANSFAC yes 26842804
chr1 12717632 12717637 MYC TRANSFAC yes 118233770
chr1 12717632 12717637 USF1 TRANSFAC yes 118233771
chr1 12717632 12717637 USF2 TRANSFAC yes 118233772
chr1 12717645 12717650 NFY TRANSFAC yes 26842805
chr1 12717645 12717650 NFY TRANSFAC yes 118233773
chr1 12717675 12717678 MYB TRANSFAC yes 26842806
chr1 12717675 12717678 MYB TRANSFAC yes 118233774
chr1 12717683 12717688 SP1 TRANSFAC yes 26842807
chr1 12717683 12717688 SP1 TRANSFAC yes 118233775
chr1 12717694 12717707 POU2F2 JASPAR yes 26842808
chr1 12717694 12717707 POU2F2 JASPAR yes 118233776
chr1 12717697 12717708 NFKB1 JASPAR yes 26842809
chr1 12717697 12717708 NFKB1 JASPAR yes 118233777
chr1 12717699 12717716 BCL6B JASPAR yes 26842810
chr1 12717699 12717716 BCL6B JASPAR yes 118233778
chr1 12717700 12717715 STAT1 JASPAR yes 26842811
chr1 12717700 12717715 STAT1 JASPAR yes 118233779
chr1 12717702 12717713 STAT1 JASPAR yes 26842812
chr1 12717702 12717713 STAT3 JASPAR yes 26842813
chr1 12717702 12717713 STAT1 JASPAR yes 118233780
chr1 12717702 12717713 STAT3 JASPAR yes 118233781
chr1 12717705 12717715 NFATC3 JASPAR yes 26842814
chr1 12717705 12717715 NFATC3 JASPAR yes 118233782
chr1 12717707 12717714 NFATC2 JASPAR yes 26842815
chr1 12717707 12717714 NFATC2 JASPAR yes 118233783
chr1 12717709 12717721 YY1 JASPAR yes 26842816
chr1 12717709 12717721 YY1 JASPAR yes 118233784
chr1 12717710 12717726 E2F2 JASPAR yes 26842817
chr1 12717710 12717726 E2F2 JASPAR yes 118233785
chr1 12717711 12717722 YY2 JASPAR yes 26842818
chr1 12717711 12717722 YY2 JASPAR yes 118233786
chr1 12717721 12717736 STAT1 JASPAR yes 26842819
chr1 12717721 12717736 STAT1 JASPAR yes 118233787
chr1 12717723 12717734 STAT1 JASPAR yes 26842820
chr1 12717723 12717734 STAT3 JASPAR yes 26842821
chr1 12717723 12717734 STAT1 JASPAR yes 118233788
chr1 12717723 12717734 STAT3 JASPAR yes 118233789
chr1 12717737 12717742 SP1 TRANSFAC yes 26842822
chr1 12717737 12717742 SP1 TRANSFAC yes 118233790
chr1 12717741 12717745 H4TF2 TRANSFAC yes 26842823
chr1 12717741 12717745 H4TF2 TRANSFAC yes 118233791
chr1 12717801 12717816 FOXP1 JASPAR yes 26842824
chr1 12717801 12717816 FOXP1 JASPAR yes 118233792
chr1 12717810 12717828 MAFF JASPAR yes 26842825
chr1 12717810 12717828 MAFF JASPAR yes 118233793
chr1 12717812 12717827 MAFK JASPAR yes 26842826
chr1 12717812 12717827 MAFK JASPAR yes 118233794
chr1 12717822 12717836 GLIS3 JASPAR yes 26842827
chr1 12717822 12717836 GLIS3 JASPAR yes 118233795
chr1 12717832 12717836 H4TF2 TRANSFAC yes 26842828
chr1 12717832 12717836 H4TF2 TRANSFAC yes 118233796
chr1 12717850 12717854 ESR1 TRANSFAC yes 26842829
chr1 12717850 12717854 ESR1 TRANSFAC yes 118233797
chr1 12717860 12717872 YY1 JASPAR yes 26842830
chr1 12717860 12717872 YY1 JASPAR yes 118233798
chr1 12717865 12717880 TP53 JASPAR yes 26842831
chr1 12717865 12717880 TP53 JASPAR yes 118233799
chr1 12717872 12717876 H4TF2 TRANSFAC yes 26842832
chr1 12717872 12717876 H4TF2 TRANSFAC yes 118233800
chr1 12717916 12717930 GATA2 JASPAR yes 26842833
chr1 12717916 12717930 GATA2 JASPAR yes 118233801
chr1 12717941 12717953 YY1 JASPAR yes 26842834
chr1 12717941 12717953 YY1 JASPAR yes 118233802
chr1 12717946 12717950 YY1 TRANSFAC yes 26842835
chr1 12717946 12717950 YY1 TRANSFAC yes 118233803
chr1 12717951 12717966 STAT2 JASPAR yes 26842836
chr1 12717951 12717966 STAT2 JASPAR yes 118233804
chr1 12717952 12717966 STAT1 JASPAR yes 26842837
chr1 12717952 12717966 STAT1 JASPAR yes 118233805
chr1 12717956 12717961 ETS2 TRANSFAC yes 26842838
chr1 12717956 12717961 ETS2 TRANSFAC yes 118233806
SNP sites on vista421[chr1:12717632-12717976]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12717636 rs3010937 G A
BHLHE40 BHLHE41 CLOCK HES5 HES7 HEY1 HEY2 MAX MYC USF1 USF2
88018
chr1 12717639 rs142715154 C T
BHLHE40 BHLHE41 CLOCK HES5 HES7 HEY1 HEY2 MAX
88019
chr1 12717653 rs144394580 G A no 88020
chr1 12717687 rs181501409 C T
SP1
88021
chr1 12717701 rs531797950 A G
BCL6B NFKB1 POU2F2 STAT1
88022
chr1 12717707 rs148386610 C G
BCL6B NFATC2 NFATC3 NFKB1 POU2F2 STAT1 STAT3
88023
chr1 12717719 rs141573827 G A
E2F2 YY1 YY2
88024
chr1 12717744 rs2265707 T A
H4TF2
88025
chr1 12717849 rs184044442 C G no 88026
chr1 12717861 rs3010938 G A
YY1
88027
chr1 12717885 rs540499974 C T no 88028
Genes possibly regulated by vista421[chr1:12717632-12717976]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12627939 12677737 - DHRS3 ENSG00000162496.4 12677737 0.85 1.0 169 60105
chr1 12704566 12727097 + AADACL4 ENSG00000204518.2 12704566 0.97 0.98 170 86934
chr1 12776118 12788726 + AADACL3 ENSG00000188984.7 12776118 0.98 0.0 171 41858
chr1 12806163 12823847 + C1orf158 ENSG00000157330.5 12806163 0.96 0.96 172 11813
Expression level of Genes
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miRNAs possibly regulated by vista421[chr1:12717632-12717976]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results