EnhancerDB
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  3. vista42102[chr3:120397142-120397339]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42102[chr3:120397142-120397339]
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Tissue distribution of vista42102
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Transcription factor that possibly regulate vista42102[chr3:120397142-120397339]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 120397185 120397699 TCF12 UCSC Txn Factor no Conserved 108530037
chr3 120397185 120397699 TCF12 UCSC Txn Factor no Conserved 108530038
chr3 120397198 120397721 EP300 UCSC Txn Factor no Conserved 108530039
chr3 120397198 120397721 EP300 UCSC Txn Factor no Conserved 108530040
chr3 120397139 120397142 MYB TRANSFAC yes 5221379
chr3 120397139 120397142 MYB TRANSFAC yes 71036515
chr3 120397156 120397171 STAT1 JASPAR yes 5221380
chr3 120397156 120397171 STAT1 JASPAR yes 71036516
chr3 120397168 120397178 TEAD4 JASPAR yes 5221381
chr3 120397168 120397178 TEAD4 JASPAR yes 71036517
chr3 120397200 120397209 HIC2 JASPAR yes 5221382
chr3 120397200 120397209 HIC2 JASPAR yes 71036518
chr3 120397203 120397207 LFA1 TRANSFAC yes 5221383
chr3 120397203 120397207 LFA1 TRANSFAC yes 71036519
chr3 120397206 120397210 YY1 TRANSFAC yes 5221384
chr3 120397206 120397210 YY1 TRANSFAC yes 71036520
chr3 120397222 120397228 LEF1 TRANSFAC yes 5221385
chr3 120397222 120397228 SOX10 JASPAR yes 5221386
chr3 120397222 120397228 LEF1 TRANSFAC yes 71036521
chr3 120397222 120397228 SOX10 JASPAR yes 71036522
chr3 120397230 120397244 SPI1 JASPAR yes 5221387
chr3 120397230 120397244 SPI1 JASPAR yes 71036523
chr3 120397237 120397246 SOX9 JASPAR yes 5221388
chr3 120397237 120397246 SOX9 JASPAR yes 71036524
chr3 120397257 120397264 SPIB JASPAR yes 5221389
chr3 120397257 120397264 SPIB JASPAR yes 71036525
chr3 120397257 120397278 ZNF263 JASPAR yes 5221390
chr3 120397257 120397278 ZNF263 JASPAR yes 71036526
chr3 120397258 120397266 EHF JASPAR yes 5221391
chr3 120397258 120397266 EHF JASPAR yes 71036527
chr3 120397262 120397267 ETS2 TRANSFAC yes 5221392
chr3 120397262 120397267 ETS2 TRANSFAC yes 71036528
chr3 120397262 120397270 EHF JASPAR yes 5221393
chr3 120397262 120397270 EHF JASPAR yes 71036529
chr3 120397276 120397286 TFAP4 JASPAR yes 5221394
chr3 120397276 120397286 TFAP4 JASPAR yes 71036530
chr3 120397307 120397318 FOS JASPAR yes 5221395
chr3 120397307 120397318 FOS JASPAR yes 71036531
chr3 120397307 120397322 HNF1A JASPAR yes 5221396
chr3 120397307 120397322 HNF1A JASPAR yes 71036532
chr3 120397308 120397320 HNF1B JASPAR yes 5221397
chr3 120397308 120397320 HNF1B JASPAR yes 71036533
chr3 120397308 120397321 HNF1B JASPAR yes 5221398
chr3 120397308 120397321 HNF1B JASPAR yes 71036534
chr3 120397309 120397320 BATF JASPAR yes 5221399
chr3 120397309 120397320 BATF JASPAR yes 71036535
chr3 120397309 120397321 HNF1B JASPAR yes 5221400
chr3 120397309 120397321 HNF1B JASPAR yes 71036536
chr3 120397310 120397320 POU6F2 JASPAR yes 5221401
chr3 120397310 120397320 POU6F2 JASPAR yes 71036537
chr3 120397311 120397321 GSX1 JASPAR yes 5221402
chr3 120397311 120397321 GSX2 JASPAR yes 5221403
chr3 120397311 120397321 HOXA2 JASPAR yes 5221404
chr3 120397311 120397321 HOXB2 JASPAR yes 5221405
chr3 120397311 120397321 HOXB3 JASPAR yes 5221406
chr3 120397311 120397321 LHX2 JASPAR yes 5221407
chr3 120397311 120397321 MEOX1 JASPAR yes 5221408
chr3 120397311 120397321 MEOX2 JASPAR yes 5221409
chr3 120397311 120397321 NOTO JASPAR yes 5221410
chr3 120397311 120397321 GSX1 JASPAR yes 71036538
chr3 120397311 120397321 GSX2 JASPAR yes 71036539
chr3 120397311 120397321 HOXA2 JASPAR yes 71036540
chr3 120397311 120397321 HOXB2 JASPAR yes 71036541
chr3 120397311 120397321 HOXB3 JASPAR yes 71036542
chr3 120397311 120397321 LHX2 JASPAR yes 71036543
chr3 120397311 120397321 MEOX1 JASPAR yes 71036544
chr3 120397311 120397321 MEOX2 JASPAR yes 71036545
chr3 120397311 120397321 NOTO JASPAR yes 71036546
chr3 120397312 120397320 NKX6-1 JASPAR yes 5221411
chr3 120397312 120397320 NKX6-2 JASPAR yes 5221412
chr3 120397312 120397320 NKX6-1 JASPAR yes 71036547
chr3 120397312 120397320 NKX6-2 JASPAR yes 71036548
chr3 120397314 120397318 YY1 TRANSFAC yes 5221413
chr3 120397314 120397318 YY1 TRANSFAC yes 71036549
chr3 120397317 120397320 MYB TRANSFAC yes 5221414
chr3 120397317 120397320 MYB TRANSFAC yes 71036550
chr3 120397319 120397333 SPI1 JASPAR yes 5221415
chr3 120397319 120397333 SPIC JASPAR yes 5221416
chr3 120397319 120397333 SPI1 JASPAR yes 71036551
chr3 120397319 120397333 SPIC JASPAR yes 71036552
chr3 120397322 120397332 MZF1 JASPAR yes 5221417
chr3 120397322 120397332 MZF1 JASPAR yes 71036553
chr3 120397323 120397329 MZF1 JASPAR yes 5221418
chr3 120397323 120397329 MZF1 JASPAR yes 71036554
chr3 120397331 120397337 LEF1 TRANSFAC yes 5221419
chr3 120397331 120397337 SOX10 JASPAR yes 5221420
chr3 120397331 120397337 LEF1 TRANSFAC yes 71036555
chr3 120397331 120397337 SOX10 JASPAR yes 71036556
chr3 120397336 120397339 MYB TRANSFAC yes 5221421
chr3 120397336 120397339 MYB TRANSFAC yes 71036557
SNP sites on vista42102[chr3:120397142-120397339]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 120397143 rs190241458 C A no 6983262
chr3 120397226 rs375194412 T G
EP300 LEF1 SOX10 TCF12
6983263
Genes possibly regulated by vista42102[chr3:120397142-120397339]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 120315156 120321347 + NDUFB4 ENSG00000065518.7 120315156 0.75 0.99 3984 18014
chr3 120347020 120401418 - HGD ENSG00000113924.7 120401418 0.98 0.98 3985 95921
chr3 120405528 120461840 - RABL3 ENSG00000144840.4 120461840 0.63 0.99 3986 35499
chr3 120461484 120501916 + GTF2E1 ENSG00000153767.5 120461484 0.54 0.99 3987 35855
Expression level of Genes
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miRNAs possibly regulated by vista42102[chr3:120397142-120397339]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results