EnhancerDB
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  3. vista42106[chr3:120493479-120494008]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42106[chr3:120493479-120494008]
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Tissue distribution of vista42106
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Transcription factor that possibly regulate vista42106[chr3:120493479-120494008]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 120493475 120493496 IRF1 JASPAR yes 5223671
chr3 120493475 120493496 IRF1 JASPAR yes 71036689
chr3 120493478 120493493 FOXP1 JASPAR yes 5223672
chr3 120493478 120493493 FOXP1 JASPAR yes 71036690
chr3 120493479 120493494 FOXP1 JASPAR yes 5223673
chr3 120493479 120493494 FOXP1 JASPAR yes 71036691
chr3 120493480 120493495 FOXP1 JASPAR yes 5223674
chr3 120493480 120493495 FOXP1 JASPAR yes 71036692
chr3 120493480 120493501 IRF1 JASPAR yes 5223675
chr3 120493480 120493501 IRF1 JASPAR yes 71036693
chr3 120493481 120493496 FOXP1 JASPAR yes 5223676
chr3 120493481 120493496 FOXP1 JASPAR yes 71036694
chr3 120493481 120493502 IRF1 JASPAR yes 5223677
chr3 120493481 120493502 IRF1 JASPAR yes 71036695
chr3 120493482 120493497 FOXP1 JASPAR yes 5223678
chr3 120493482 120493497 FOXP1 JASPAR yes 71036696
chr3 120493502 120493507 NFY TRANSFAC yes 5223679
chr3 120493502 120493507 NFY TRANSFAC yes 71036697
chr3 120493506 120493511 GATA2 JASPAR yes 5223680
chr3 120493506 120493511 GATA2 JASPAR yes 71036698
chr3 120493507 120493522 FOXA1 JASPAR yes 5223681
chr3 120493507 120493522 FOXA1 JASPAR yes 71036699
chr3 120493509 120493521 FOXC2 JASPAR yes 5223682
chr3 120493509 120493521 FOXC2 JASPAR yes 71036700
chr3 120493510 120493521 FOXB1 JASPAR yes 5223683
chr3 120493510 120493521 FOXC1 JASPAR yes 5223684
chr3 120493510 120493521 FOXB1 JASPAR yes 71036701
chr3 120493510 120493521 FOXC1 JASPAR yes 71036702
chr3 120493511 120493515 YY1 TRANSFAC yes 5223685
chr3 120493511 120493515 YY1 TRANSFAC yes 71036703
chr3 120493534 120493544 SMAD3 JASPAR yes 5223686
chr3 120493534 120493544 SMAD3 JASPAR yes 71036704
chr3 120493551 120493562 FOXA1 JASPAR yes 5223687
chr3 120493551 120493562 FOXA1 JASPAR yes 71036705
chr3 120493551 120493566 FOXA1 JASPAR yes 5223688
chr3 120493551 120493566 FOXA1 JASPAR yes 71036706
chr3 120493560 120493563 MYB TRANSFAC yes 5223689
chr3 120493560 120493563 MYB TRANSFAC yes 71036707
chr3 120493583 120493604 ZNF263 JASPAR yes 5223690
chr3 120493583 120493604 ZNF263 JASPAR yes 71036708
chr3 120493610 120493625 SCRT1 JASPAR yes 5223691
chr3 120493610 120493625 SCRT1 JASPAR yes 71036709
chr3 120493633 120493638 ETS2 TRANSFAC yes 5223692
chr3 120493633 120493638 ETS2 TRANSFAC yes 71036710
chr3 120493647 120493662 PRDM1 JASPAR yes 5223693
chr3 120493647 120493662 PRDM1 JASPAR yes 71036711
chr3 120493665 120493671 SOX10 JASPAR yes 5223694
chr3 120493665 120493671 SOX10 JASPAR yes 71036712
chr3 120493672 120493687 RFX5 JASPAR yes 5223695
chr3 120493672 120493687 RFX5 JASPAR yes 71036713
chr3 120493673 120493682 TFAP2A JASPAR yes 5223696
chr3 120493673 120493682 TFAP2A JASPAR yes 71036714
chr3 120493678 120493682 LFA1 TRANSFAC yes 5223697
chr3 120493678 120493682 LFA1 TRANSFAC yes 71036715
chr3 120493691 120493709 IRF2 JASPAR yes 5223698
chr3 120493691 120493709 IRF2 JASPAR yes 71036716
chr3 120493702 120493714 POU2F1 JASPAR yes 5223699
chr3 120493702 120493714 POU2F1 JASPAR yes 71036717
chr3 120493704 120493713 POU3F4 JASPAR yes 5223700
chr3 120493704 120493713 POU5F1B JASPAR yes 5223701
chr3 120493704 120493713 POU3F4 JASPAR yes 71036718
chr3 120493704 120493713 POU5F1B JASPAR yes 71036719
chr3 120493713 120493730 BCL6B JASPAR yes 5223702
chr3 120493713 120493730 BCL6B JASPAR yes 71036720
chr3 120493730 120493738 RHOXF1 JASPAR yes 5223703
chr3 120493730 120493738 RHOXF1 JASPAR yes 71036721
chr3 120493742 120493760 ESR2 JASPAR yes 5223704
chr3 120493742 120493760 ESR2 JASPAR yes 71036722
chr3 120493744 120493764 ESR1 JASPAR yes 5223705
chr3 120493744 120493764 ESR1 JASPAR yes 71036723
chr3 120493751 120493762 FOXH1 JASPAR yes 5223706
chr3 120493751 120493762 FOXH1 JASPAR yes 71036724
chr3 120493759 120493763 LFA1 TRANSFAC yes 5223707
chr3 120493759 120493763 LFA1 TRANSFAC yes 71036725
chr3 120493767 120493781 GATA2 JASPAR yes 5223708
chr3 120493767 120493781 GATA2 JASPAR yes 71036726
chr3 120493769 120493776 GATA3 TRANSFAC yes 5223709
chr3 120493769 120493776 GATA3 TRANSFAC yes 71036727
chr3 120493769 120493777 GATA5 JASPAR yes 5223710
chr3 120493769 120493777 GATA5 JASPAR yes 71036728
chr3 120493772 120493775 MYB TRANSFAC yes 5223711
chr3 120493772 120493775 MYB TRANSFAC yes 71036729
chr3 120493775 120493779 YY1 TRANSFAC yes 5223712
chr3 120493775 120493779 YY1 TRANSFAC yes 71036730
chr3 120493778 120493782 YY1 TRANSFAC yes 5223713
chr3 120493778 120493782 YY1 TRANSFAC yes 71036731
chr3 120493783 120493789 TCF4 TRANSFAC yes 5223714
chr3 120493783 120493789 TCF4 TRANSFAC yes 71036732
chr3 120493787 120493797 CEBPB JASPAR yes 5223715
chr3 120493787 120493797 CEBPD JASPAR yes 5223716
chr3 120493787 120493797 CEBPE JASPAR yes 5223717
chr3 120493787 120493797 CEBPB JASPAR yes 71036733
chr3 120493787 120493797 CEBPD JASPAR yes 71036734
chr3 120493787 120493797 CEBPE JASPAR yes 71036735
chr3 120493787 120493798 CEBPA JASPAR yes 5223718
chr3 120493787 120493798 CEBPA JASPAR yes 71036736
chr3 120493814 120493819 GATA2 JASPAR yes 5223719
chr3 120493814 120493819 GATA2 JASPAR yes 71036737
chr3 120493820 120493841 ZNF263 JASPAR yes 5223720
chr3 120493820 120493841 ZNF263 JASPAR yes 71036738
chr3 120493831 120493836 GATA2 JASPAR yes 5223721
chr3 120493831 120493836 GATA2 JASPAR yes 71036739
chr3 120493834 120493845 TBX20 JASPAR yes 5223722
chr3 120493834 120493845 TBX20 JASPAR yes 71036740
chr3 120493835 120493843 TBX15 JASPAR yes 5223723
chr3 120493835 120493843 TBX15 JASPAR yes 71036741
chr3 120493836 120493841 SP1 TRANSFAC yes 5223724
chr3 120493836 120493841 SP1 TRANSFAC yes 71036742
chr3 120493859 120493878 CTCF JASPAR yes 5223725
chr3 120493859 120493878 CTCF JASPAR yes 71036743
chr3 120493874 120493878 ESR1 TRANSFAC yes 5223726
chr3 120493874 120493878 ESR1 TRANSFAC yes 71036744
chr3 120493880 120493886 HiNF-A TRANSFAC yes 5223727
chr3 120493880 120493886 HiNF-A TRANSFAC yes 71036745
chr3 120493942 120493950 FOXC1 JASPAR yes 5223728
chr3 120493942 120493950 FOXC1 JASPAR yes 71036746
chr3 120493944 120493951 NKX3-1 JASPAR yes 5223729
chr3 120493944 120493951 NKX3-1 JASPAR yes 71036747
chr3 120493969 120493977 GATA3 JASPAR yes 5223730
chr3 120493969 120493977 GATA5 JASPAR yes 5223731
chr3 120493969 120493977 GATA3 JASPAR yes 71036748
chr3 120493969 120493977 GATA5 JASPAR yes 71036749
chr3 120493991 120494005 PAX6 JASPAR yes 5223732
chr3 120493991 120494005 PAX6 JASPAR yes 71036750
SNP sites on vista42106[chr3:120493479-120494008]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 120493480 rs397874134 CA C
FOXP1 IRF1
6983460
chr3 120493480 rs5852253 CA C
FOXP1 IRF1
6983461
chr3 120493480 rs750875889 CA C
FOXP1 IRF1
6983462
chr3 120493650 rs111927133 TG T
PRDM1
6983463
chr3 120493713 rs111969021 C T
BCL6B POU2F1 POU3F4 POU5F1B
6983464
chr3 120493932 rs16831653 C T no 6983465
Genes possibly regulated by vista42106[chr3:120493479-120494008]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 120347020 120401418 - HGD ENSG00000113924.7 120401418 0.98 0.98 3985 7939
chr3 120405528 120461840 - RABL3 ENSG00000144840.4 120461840 0.63 0.99 3986 68361
chr3 120461484 120501916 + GTF2E1 ENSG00000153767.5 120461484 0.54 0.99 3987 68005
Expression level of Genes
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miRNAs possibly regulated by vista42106[chr3:120493479-120494008]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results