EnhancerDB
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  3. vista42126[chr3:121676624-121676834]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42126[chr3:121676624-121676834]
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Tissue distribution of vista42126
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Transcription factor that possibly regulate vista42126[chr3:121676624-121676834]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 121676560 121676876 EBF1 UCSC Txn Factor no Conserved 108530047
chr3 121676574 121676776 SPI1 UCSC Txn Factor no Conserved 108530048
chr3 121676622 121676638 SOX4 JASPAR yes 5246393
chr3 121676622 121676638 SOX4 JASPAR yes 71037458
chr3 121676626 121676634 HOXA5 JASPAR yes 5246394
chr3 121676626 121676634 HOXA5 JASPAR yes 71037459
chr3 121676627 121676637 EN2 JASPAR yes 5246395
chr3 121676627 121676637 ESX1 JASPAR yes 5246396
chr3 121676627 121676637 GBX1 JASPAR yes 5246397
chr3 121676627 121676637 EN2 JASPAR yes 71037460
chr3 121676627 121676637 ESX1 JASPAR yes 71037461
chr3 121676627 121676637 GBX1 JASPAR yes 71037462
chr3 121676628 121676636 BSX JASPAR yes 5246398
chr3 121676628 121676636 DLX6 JASPAR yes 5246399
chr3 121676628 121676636 MSX1 JASPAR yes 5246400
chr3 121676628 121676636 MSX2 JASPAR yes 5246401
chr3 121676628 121676636 BSX JASPAR yes 71037463
chr3 121676628 121676636 DLX6 JASPAR yes 71037464
chr3 121676628 121676636 MSX1 JASPAR yes 71037465
chr3 121676628 121676636 MSX2 JASPAR yes 71037466
chr3 121676629 121676639 PAX3 JASPAR yes 5246402
chr3 121676629 121676639 PAX3 JASPAR yes 71037467
chr3 121676648 121676669 IRF1 JASPAR yes 5246403
chr3 121676648 121676669 IRF1 JASPAR yes 71037468
chr3 121676651 121676665 IRF8 JASPAR yes 5246404
chr3 121676651 121676665 IRF8 JASPAR yes 71037469
chr3 121676652 121676666 SPI1 JASPAR yes 5246405
chr3 121676652 121676666 SPI1 JASPAR yes 71037470
chr3 121676652 121676667 STAT2 JASPAR yes 5246406
chr3 121676652 121676667 STAT2 JASPAR yes 71037471
chr3 121676653 121676674 ZNF263 JASPAR yes 5246407
chr3 121676653 121676674 ZNF263 JASPAR yes 71037472
chr3 121676656 121676663 SPIB JASPAR yes 5246408
chr3 121676656 121676663 SPIB JASPAR yes 71037473
chr3 121676664 121676685 ZNF263 JASPAR yes 5246409
chr3 121676664 121676685 ZNF263 JASPAR yes 71037474
chr3 121676689 121676700 NRL JASPAR yes 5246410
chr3 121676689 121676700 NRL JASPAR yes 71037475
chr3 121676692 121676705 JUN JASPAR yes 5246411
chr3 121676692 121676705 JUN JASPAR yes 71037476
chr3 121676693 121676706 ATF4 JASPAR yes 5246412
chr3 121676693 121676706 ATF4 JASPAR yes 71037477
chr3 121676700 121676721 ZNF263 JASPAR yes 5246413
chr3 121676700 121676721 ZNF263 JASPAR yes 71037478
chr3 121676727 121676737 MAX JASPAR yes 5246414
chr3 121676727 121676737 MAX JASPAR yes 71037479
chr3 121676727 121676738 USF2 JASPAR yes 5246415
chr3 121676727 121676738 USF2 JASPAR yes 71037480
chr3 121676728 121676738 TFE3 JASPAR yes 5246416
chr3 121676728 121676738 TFEB JASPAR yes 5246417
chr3 121676728 121676738 TFEC JASPAR yes 5246418
chr3 121676728 121676738 TFE3 JASPAR yes 71037481
chr3 121676728 121676738 TFEB JASPAR yes 71037482
chr3 121676728 121676738 TFEC JASPAR yes 71037483
chr3 121676742 121676749 SPIB JASPAR yes 5246419
chr3 121676742 121676749 SPIB JASPAR yes 71037484
chr3 121676743 121676751 FEV JASPAR yes 5246420
chr3 121676743 121676751 FEV JASPAR yes 71037485
chr3 121676758 121676763 TFAP2A TRANSFAC yes 5246421
chr3 121676758 121676763 TFAP2A TRANSFAC yes 71037486
chr3 121676758 121676764 MZF1 JASPAR yes 5246422
chr3 121676758 121676764 MZF1 JASPAR yes 71037487
chr3 121676760 121676765 ETS2 TRANSFAC yes 5246423
chr3 121676760 121676765 ETS2 TRANSFAC yes 71037488
chr3 121676760 121676774 STAT1 JASPAR yes 5246424
chr3 121676760 121676774 STAT1 JASPAR yes 71037489
chr3 121676760 121676775 PRDM1 JASPAR yes 5246425
chr3 121676760 121676775 STAT2 JASPAR yes 5246426
chr3 121676760 121676775 PRDM1 JASPAR yes 71037490
chr3 121676760 121676775 STAT2 JASPAR yes 71037491
chr3 121676764 121676777 NFKB1 JASPAR yes 5246427
chr3 121676764 121676777 NFKB2 JASPAR yes 5246428
chr3 121676764 121676777 NFKB1 JASPAR yes 71037492
chr3 121676764 121676777 NFKB2 JASPAR yes 71037493
chr3 121676766 121676776 REL JASPAR yes 5246429
chr3 121676766 121676776 REL JASPAR yes 71037494
chr3 121676770 121676786 SOX4 JASPAR yes 5246430
chr3 121676770 121676786 SOX4 JASPAR yes 71037495
chr3 121676772 121676777 MYC TRANSFAC yes 5246431
chr3 121676772 121676777 MYC TRANSFAC yes 71037496
chr3 121676795 121676800 MYB TRANSFAC yes 5246432
chr3 121676795 121676800 MYB TRANSFAC yes 71037497
chr3 121676813 121676821 MEIS3 JASPAR yes 5246433
chr3 121676813 121676821 MEIS3 JASPAR yes 71037498
chr3 121676814 121676818 NFE TRANSFAC yes 5246434
chr3 121676814 121676818 NFE TRANSFAC yes 71037499
SNP sites on vista42126[chr3:121676624-121676834]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 121676646 rs73855480 A G
EBF1 SPI1
6985296
chr3 121676763 rs116791917 G A
EBF1 ETS2 MZF1 PRDM1 SPI1 STAT1 STAT2 TFAP2A
6985297
chr3 121676777 rs540922724 G A
EBF1 MYC NFKB1 NFKB2 SOX4
6985298
Genes possibly regulated by vista42126[chr3:121676624-121676834]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 121612936 121662949 + SLC15A2 ENSG00000163406.6 121612936 0.91 0.99 3996 36312
chr3 121706170 121741051 - ILDR1 ENSG00000145103.8 121741051 0.9 1.0 3997 35783
chr3 121774213 121839983 + CD86 ENSG00000114013.11 121774213 0.93 0.96 3998 2621
Expression level of Genes
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miRNAs possibly regulated by vista42126[chr3:121676624-121676834]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results