EnhancerDB
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  3. vista42145[chr3:121800469-121800680]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42145[chr3:121800469-121800680]
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Tissue distribution of vista42145
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Transcription factor that possibly regulate vista42145[chr3:121800469-121800680]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 121800423 121800718 RUNX3 UCSC Txn Factor no Conserved 108530062
chr3 121800428 121800670 BATF UCSC Txn Factor no Conserved 108530063
chr3 121800470 121800477 SPIB JASPAR yes 5254213
chr3 121800470 121800477 SPIB JASPAR yes 71038481
chr3 121800470 121800480 GABPA JASPAR yes 5254214
chr3 121800470 121800480 GABPA JASPAR yes 71038482
chr3 121800477 121800492 MYBL2 JASPAR yes 5254215
chr3 121800477 121800492 MYBL2 JASPAR yes 71038483
chr3 121800505 121800508 MYB TRANSFAC yes 5254216
chr3 121800505 121800508 MYB TRANSFAC yes 71038484
chr3 121800515 121800525 NKX2-3 JASPAR yes 5254217
chr3 121800515 121800525 NKX2-3 JASPAR yes 71038485
chr3 121800516 121800525 NKX3-2 JASPAR yes 5254218
chr3 121800516 121800525 NKX3-2 JASPAR yes 71038486
chr3 121800543 121800553 EMX1 JASPAR yes 5254219
chr3 121800543 121800553 EMX2 JASPAR yes 5254220
chr3 121800543 121800553 GBX2 JASPAR yes 5254221
chr3 121800543 121800553 HOXB2 JASPAR yes 5254222
chr3 121800543 121800553 HOXB3 JASPAR yes 5254223
chr3 121800543 121800553 LHX6 JASPAR yes 5254224
chr3 121800543 121800553 MEOX1 JASPAR yes 5254225
chr3 121800543 121800553 MEOX2 JASPAR yes 5254226
chr3 121800543 121800553 MNX1 JASPAR yes 5254227
chr3 121800543 121800553 POU6F1 JASPAR yes 5254228
chr3 121800543 121800553 EMX1 JASPAR yes 71038487
chr3 121800543 121800553 EMX2 JASPAR yes 71038488
chr3 121800543 121800553 GBX2 JASPAR yes 71038489
chr3 121800543 121800553 HOXB2 JASPAR yes 71038490
chr3 121800543 121800553 HOXB3 JASPAR yes 71038491
chr3 121800543 121800553 LHX6 JASPAR yes 71038492
chr3 121800543 121800553 MEOX1 JASPAR yes 71038493
chr3 121800543 121800553 MEOX2 JASPAR yes 71038494
chr3 121800543 121800553 MNX1 JASPAR yes 71038495
chr3 121800543 121800553 POU6F1 JASPAR yes 71038496
chr3 121800544 121800552 LMX1A JASPAR yes 5254229
chr3 121800544 121800552 LMX1B JASPAR yes 5254230
chr3 121800544 121800552 NKX6-1 JASPAR yes 5254231
chr3 121800544 121800552 NKX6-2 JASPAR yes 5254232
chr3 121800544 121800552 PDX1 JASPAR yes 5254233
chr3 121800544 121800552 VAX1 JASPAR yes 5254234
chr3 121800544 121800552 VAX2 JASPAR yes 5254235
chr3 121800544 121800552 VSX1 JASPAR yes 5254236
chr3 121800544 121800552 LMX1A JASPAR yes 71038497
chr3 121800544 121800552 LMX1B JASPAR yes 71038498
chr3 121800544 121800552 NKX6-1 JASPAR yes 71038499
chr3 121800544 121800552 NKX6-2 JASPAR yes 71038500
chr3 121800544 121800552 PDX1 JASPAR yes 71038501
chr3 121800544 121800552 VAX1 JASPAR yes 71038502
chr3 121800544 121800552 VAX2 JASPAR yes 71038503
chr3 121800544 121800552 VSX1 JASPAR yes 71038504
chr3 121800548 121800555 NKX3-1 JASPAR yes 5254237
chr3 121800548 121800555 NKX3-1 JASPAR yes 71038505
chr3 121800552 121800566 ONECUT3 JASPAR yes 5254238
chr3 121800552 121800566 ONECUT3 JASPAR yes 71038506
chr3 121800558 121800562 H1TF2 TRANSFAC yes 5254239
chr3 121800558 121800562 NFE TRANSFAC yes 5254240
chr3 121800558 121800562 SRF TRANSFAC yes 5254241
chr3 121800558 121800562 H1TF2 TRANSFAC yes 71038507
chr3 121800558 121800562 NFE TRANSFAC yes 71038508
chr3 121800558 121800562 SRF TRANSFAC yes 71038509
chr3 121800584 121800588 TEAD2 TRANSFAC yes 5254242
chr3 121800584 121800588 TEAD2 TRANSFAC yes 71038510
chr3 121800586 121800589 MYB TRANSFAC yes 5254243
chr3 121800586 121800589 MYB TRANSFAC yes 71038511
chr3 121800602 121800622 TP63 JASPAR yes 5254244
chr3 121800602 121800622 TP63 JASPAR yes 71038512
chr3 121800603 121800621 TP53 JASPAR yes 5254245
chr3 121800603 121800621 TP63 JASPAR yes 5254246
chr3 121800603 121800621 TP73 JASPAR yes 5254247
chr3 121800603 121800621 TP53 JASPAR yes 71038513
chr3 121800603 121800621 TP63 JASPAR yes 71038514
chr3 121800603 121800621 TP73 JASPAR yes 71038515
chr3 121800604 121800619 TP53 JASPAR yes 5254248
chr3 121800604 121800619 TP53 JASPAR yes 71038516
chr3 121800605 121800620 TP53 JASPAR yes 5254249
chr3 121800605 121800620 TP53 JASPAR yes 71038517
chr3 121800612 121800615 MYB TRANSFAC yes 5254250
chr3 121800612 121800615 MYB TRANSFAC yes 71038518
chr3 121800634 121800654 ESR1 JASPAR yes 5254251
chr3 121800634 121800654 ESR1 JASPAR yes 71038519
chr3 121800638 121800652 JUN JASPAR yes 5254252
chr3 121800638 121800652 JUN JASPAR yes 71038520
chr3 121800639 121800654 ESR2 JASPAR yes 5254253
chr3 121800639 121800654 ESR2 JASPAR yes 71038521
chr3 121800639 121800659 ESR1 JASPAR yes 5254254
chr3 121800639 121800659 ESR1 JASPAR yes 71038522
chr3 121800640 121800651 BATF JASPAR yes 5254255
chr3 121800640 121800651 BATF JASPAR yes 71038523
chr3 121800642 121800653 FOS JASPAR yes 5254256
chr3 121800642 121800653 FOSL1 JASPAR yes 5254257
chr3 121800642 121800653 JUND JASPAR yes 5254258
chr3 121800642 121800653 FOS JASPAR yes 71038524
chr3 121800642 121800653 FOSL1 JASPAR yes 71038525
chr3 121800642 121800653 JUND JASPAR yes 71038526
chr3 121800643 121800654 FOSL2 JASPAR yes 5254259
chr3 121800643 121800654 JUNB JASPAR yes 5254260
chr3 121800643 121800654 FOSL2 JASPAR yes 71038527
chr3 121800643 121800654 JUNB JASPAR yes 71038528
chr3 121800643 121800657 JUN JASPAR yes 5254261
chr3 121800643 121800657 JUN JASPAR yes 71038529
chr3 121800646 121800655 ZEB1 JASPAR yes 5254262
chr3 121800646 121800655 ZEB1 JASPAR yes 71038530
chr3 121800646 121800658 PKNOX1 JASPAR yes 5254263
chr3 121800646 121800658 PKNOX1 JASPAR yes 71038531
chr3 121800649 121800654 USF2 TRANSFAC yes 5254264
chr3 121800649 121800654 USF2 TRANSFAC yes 71038532
chr3 121800651 121800659 MEIS2 JASPAR yes 5254265
chr3 121800651 121800659 MEIS3 JASPAR yes 5254266
chr3 121800651 121800659 MEIS2 JASPAR yes 71038533
chr3 121800651 121800659 MEIS3 JASPAR yes 71038534
chr3 121800652 121800656 NFE TRANSFAC yes 5254267
chr3 121800652 121800656 NFE TRANSFAC yes 71038535
chr3 121800652 121800659 MEIS1 JASPAR yes 5254268
chr3 121800652 121800659 MEIS1 JASPAR yes 71038536
SNP sites on vista42145[chr3:121800469-121800680]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 121800487 rs9831894 A C
BATF MYBL2 RUNX3
6985867
chr3 121800579 rs187060181 A G
BATF RUNX3
6985868
chr3 121800602 rs76243581 C A,T
BATF RUNX3 TP63
6985869
Genes possibly regulated by vista42145[chr3:121800469-121800680]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 121706170 121741051 - ILDR1 ENSG00000145103.8 121741051 0.9 1.0 3997 40582
chr3 121774213 121839983 + CD86 ENSG00000114013.11 121774213 0.93 0.96 3998 73744
Expression level of Genes
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miRNAs possibly regulated by vista42145[chr3:121800469-121800680]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results