EnhancerDB
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  3. vista42148[chr3:121820083-121820229]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42148[chr3:121820083-121820229]
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Tissue distribution of vista42148
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Transcription factor that possibly regulate vista42148[chr3:121820083-121820229]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 121819998 121820351 RFX5 UCSC Txn Factor no Conserved 108530064
chr3 121819998 121820351 RFX5 UCSC Txn Factor no Conserved 108530065
chr3 121820080 121820091 HOXC13 JASPAR yes 5256148
chr3 121820080 121820091 HOXC13 JASPAR yes 71038581
chr3 121820086 121820098 YY1 JASPAR yes 5256149
chr3 121820086 121820098 YY1 JASPAR yes 71038582
chr3 121820100 121820106 JUN TRANSFAC yes 5256150
chr3 121820100 121820106 JUN TRANSFAC yes 71038583
chr3 121820100 121820114 SPIC JASPAR yes 5256151
chr3 121820100 121820114 SPIC JASPAR yes 71038584
chr3 121820117 121820122 SP1 TRANSFAC yes 5256152
chr3 121820117 121820122 SP1 TRANSFAC yes 71038585
chr3 121820120 121820125 SP1 TRANSFAC yes 5256153
chr3 121820120 121820125 SP1 TRANSFAC yes 71038586
chr3 121820154 121820168 CREB3 JASPAR yes 5256154
chr3 121820154 121820168 CREB3 JASPAR yes 71038587
chr3 121820157 121820162 ATF1 TRANSFAC yes 5256155
chr3 121820157 121820162 ATF1 TRANSFAC yes 71038588
chr3 121820161 121820179 NFYA JASPAR yes 5256156
chr3 121820161 121820179 NFYA JASPAR yes 71038589
chr3 121820164 121820180 NFYA JASPAR yes 5256157
chr3 121820164 121820180 NFYA JASPAR yes 71038590
chr3 121820167 121820182 NFYB JASPAR yes 5256158
chr3 121820167 121820182 NFYB JASPAR yes 71038591
chr3 121820173 121820177 H4TF2 TRANSFAC yes 5256159
chr3 121820173 121820177 H4TF2 TRANSFAC yes 71038592
chr3 121820179 121820192 EOMES JASPAR yes 5256160
chr3 121820179 121820192 EOMES JASPAR yes 71038593
chr3 121820181 121820192 TBX20 JASPAR yes 5256161
chr3 121820181 121820192 TBX20 JASPAR yes 71038594
chr3 121820182 121820192 TBX21 JASPAR yes 5256162
chr3 121820182 121820192 TBX21 JASPAR yes 71038595
chr3 121820183 121820191 MGA JASPAR yes 5256163
chr3 121820183 121820191 TBX15 JASPAR yes 5256164
chr3 121820183 121820191 TBX1 JASPAR yes 5256165
chr3 121820183 121820191 TBX4 JASPAR yes 5256166
chr3 121820183 121820191 TBX5 JASPAR yes 5256167
chr3 121820183 121820191 MGA JASPAR yes 71038596
chr3 121820183 121820191 TBX15 JASPAR yes 71038597
chr3 121820183 121820191 TBX1 JASPAR yes 71038598
chr3 121820183 121820191 TBX4 JASPAR yes 71038599
chr3 121820183 121820191 TBX5 JASPAR yes 71038600
chr3 121820185 121820200 STAT2 JASPAR yes 5256168
chr3 121820185 121820200 STAT2 JASPAR yes 71038601
chr3 121820186 121820200 STAT1 JASPAR yes 5256169
chr3 121820186 121820200 STAT1 JASPAR yes 71038602
chr3 121820187 121820201 IRF7 JASPAR yes 5256170
chr3 121820187 121820201 IRF8 JASPAR yes 5256171
chr3 121820187 121820201 IRF7 JASPAR yes 71038603
chr3 121820187 121820201 IRF8 JASPAR yes 71038604
chr3 121820187 121820202 IRF9 JASPAR yes 5256172
chr3 121820187 121820202 IRF9 JASPAR yes 71038605
chr3 121820192 121820197 MYC TRANSFAC yes 5256173
chr3 121820192 121820197 MYC TRANSFAC yes 71038606
chr3 121820222 121820243 IRF1 JASPAR yes 5256174
chr3 121820222 121820243 IRF1 JASPAR yes 71038607
chr3 121820226 121820241 PRDM1 JASPAR yes 5256175
chr3 121820226 121820241 PRDM1 JASPAR yes 71038608
SNP sites on vista42148[chr3:121820083-121820229]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 121820113 rs147509049 T C
RFX5 SPIC
6985999
chr3 121820154 rs140114520 C T
CREB3 RFX5
6986000
chr3 121820162 rs544338650 G A
ATF1 CREB3 NFYA RFX5
6986001
Genes possibly regulated by vista42148[chr3:121820083-121820229]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 121706170 121741051 - ILDR1 ENSG00000145103.8 121741051 0.9 1.0 3997 20968
chr3 121774213 121839983 + CD86 ENSG00000114013.11 121774213 0.93 0.96 3998 54130
chr3 121902530 122005342 + CASR ENSG00000036828.9 121902530 0.99 1.0 3999 17699
Expression level of Genes
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miRNAs possibly regulated by vista42148[chr3:121820083-121820229]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results