EnhancerDB
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  3. vista42162[chr3:122041409-122041544]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42162[chr3:122041409-122041544]
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Tissue distribution of vista42162
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Transcription factor that possibly regulate vista42162[chr3:122041409-122041544]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 122041254 122041679 RELA UCSC Txn Factor no Conserved 108530073
chr3 122041329 122041611 RUNX3 UCSC Txn Factor no Conserved 108530074
chr3 122041425 122041445 PPARG JASPAR yes 71039251
chr3 122041437 122041451 GLIS3 JASPAR yes 71039252
chr3 122041454 122041465 ETV2 JASPAR yes 71039253
chr3 122041457 122041463 ETS1 JASPAR yes 71039254
chr3 122041472 122041483 NFKB1 JASPAR yes 71039255
chr3 122041473 122041483 NFKB1 JASPAR yes 71039256
chr3 122041473 122041483 RELA JASPAR yes 71039257
chr3 122041473 122041483 REL JASPAR yes 71039258
chr3 122041481 122041501 RREB1 JASPAR yes 71039259
chr3 122041494 122041508 IRF7 JASPAR yes 71039260
chr3 122041520 122041523 MYB TRANSFAC yes 71039261
chr3 122041536 122041543 JUN TRANSFAC yes 71039262
SNP sites on vista42162[chr3:122041409-122041544]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 122041449 rs12632211 A G
GLIS3 RELA RUNX3
6986638
chr3 122041459 rs11926972 G A
ETS1 ETV2 RELA RUNX3
6986639
chr3 122041541 rs114024275 C T
JUN RELA RUNX3
6986640
Genes possibly regulated by vista42162[chr3:122041409-122041544]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 122044091 122060819 + CSTA ENSG00000121552.3 122044091 0.97 1.0 4000 97453
chr3 122078438 122102078 - CCDC58 ENSG00000160124.5 122102078 0.75 0.98 4001 39466
chr3 122103023 122131181 + FAM162A ENSG00000114023.11 122103023 0.78 1.0 4002 38521
chr3 122130715 122134882 - WDR5B ENSG00000196981.2 122134882 0.63 0.99 4003 6662
Expression level of Genes
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miRNAs possibly regulated by vista42162[chr3:122041409-122041544]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results