EnhancerDB
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  3. vista42169[chr3:122379671-122379962]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42169[chr3:122379671-122379962]
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Tissue distribution of vista42169
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Transcription factor that possibly regulate vista42169[chr3:122379671-122379962]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 122379449 122379879 CTCF UCSC Txn Factor no Conserved 108530091
chr3 122379499 122379769 RAD21 UCSC Txn Factor no Conserved 108530092
chr3 122379663 122379684 ZNF263 JASPAR yes 5276597
chr3 122379663 122379684 ZNF263 JASPAR yes 71039470
chr3 122379683 122379702 RFX2 JASPAR yes 5276598
chr3 122379683 122379702 RFX2 JASPAR yes 71039471
chr3 122379702 122379706 YY1 TRANSFAC yes 5276599
chr3 122379702 122379706 YY1 TRANSFAC yes 71039472
chr3 122379723 122379743 RREB1 JASPAR yes 5276600
chr3 122379723 122379743 RREB1 JASPAR yes 71039473
chr3 122379765 122379779 ATF7 JASPAR yes 5276601
chr3 122379765 122379779 BATF3 JASPAR yes 5276602
chr3 122379765 122379779 CREB3 JASPAR yes 5276603
chr3 122379765 122379779 CREB3L1 JASPAR yes 5276604
chr3 122379765 122379779 ATF7 JASPAR yes 71039474
chr3 122379765 122379779 BATF3 JASPAR yes 71039475
chr3 122379765 122379779 CREB3 JASPAR yes 71039476
chr3 122379765 122379779 CREB3L1 JASPAR yes 71039477
chr3 122379766 122379780 XBP1 JASPAR yes 5276605
chr3 122379766 122379780 XBP1 JASPAR yes 71039478
chr3 122379767 122379777 MLX JASPAR yes 5276606
chr3 122379767 122379777 SREBF1 JASPAR yes 5276607
chr3 122379767 122379777 SREBF2 JASPAR yes 5276608
chr3 122379767 122379777 MLX JASPAR yes 71039479
chr3 122379767 122379777 SREBF1 JASPAR yes 71039480
chr3 122379767 122379777 SREBF2 JASPAR yes 71039481
chr3 122379768 122379773 ATF1 TRANSFAC yes 5276609
chr3 122379768 122379773 ATF1 TRANSFAC yes 71039482
chr3 122379783 122379793 HESX1 JASPAR yes 5276610
chr3 122379783 122379793 LBX2 JASPAR yes 5276611
chr3 122379783 122379793 RAX JASPAR yes 5276612
chr3 122379783 122379793 HESX1 JASPAR yes 71039483
chr3 122379783 122379793 LBX2 JASPAR yes 71039484
chr3 122379783 122379793 RAX JASPAR yes 71039485
chr3 122379784 122379792 ISX JASPAR yes 5276613
chr3 122379784 122379792 LHX9 JASPAR yes 5276614
chr3 122379784 122379792 LMX1B JASPAR yes 5276615
chr3 122379784 122379792 PRRX1 JASPAR yes 5276616
chr3 122379784 122379792 RAX2 JASPAR yes 5276617
chr3 122379784 122379792 SHOX JASPAR yes 5276618
chr3 122379784 122379792 UNCX JASPAR yes 5276619
chr3 122379784 122379792 ISX JASPAR yes 71039486
chr3 122379784 122379792 LHX9 JASPAR yes 71039487
chr3 122379784 122379792 LMX1B JASPAR yes 71039488
chr3 122379784 122379792 PRRX1 JASPAR yes 71039489
chr3 122379784 122379792 RAX2 JASPAR yes 71039490
chr3 122379784 122379792 SHOX JASPAR yes 71039491
chr3 122379784 122379792 UNCX JASPAR yes 71039492
chr3 122379790 122379795 ETS2 TRANSFAC yes 5276620
chr3 122379790 122379795 ETS2 TRANSFAC yes 71039493
chr3 122379797 122379801 YY1 TRANSFAC yes 5276621
chr3 122379797 122379801 YY1 TRANSFAC yes 71039494
chr3 122379803 122379813 GSC2 JASPAR yes 5276622
chr3 122379803 122379813 GSC2 JASPAR yes 71039495
chr3 122379804 122379812 OTX1 JASPAR yes 5276623
chr3 122379804 122379812 OTX2 JASPAR yes 5276624
chr3 122379804 122379812 OTX1 JASPAR yes 71039496
chr3 122379804 122379812 OTX2 JASPAR yes 71039497
chr3 122379823 122379838 FOXP1 JASPAR yes 5276625
chr3 122379823 122379838 FOXP1 JASPAR yes 71039498
chr3 122379824 122379835 FOXP2 JASPAR yes 5276626
chr3 122379824 122379835 FOXP2 JASPAR yes 71039499
chr3 122379825 122379833 FOXD1 JASPAR yes 5276627
chr3 122379825 122379833 FOXG1 JASPAR yes 5276628
chr3 122379825 122379833 FOXO3 JASPAR yes 5276629
chr3 122379825 122379833 FOXD1 JASPAR yes 71039500
chr3 122379825 122379833 FOXG1 JASPAR yes 71039501
chr3 122379825 122379833 FOXO3 JASPAR yes 71039502
chr3 122379826 122379833 FOXD2 JASPAR yes 5276630
chr3 122379826 122379833 FOXI1 JASPAR yes 5276631
chr3 122379826 122379833 FOXL1 JASPAR yes 5276632
chr3 122379826 122379833 FOXO4 JASPAR yes 5276633
chr3 122379826 122379833 FOXO6 JASPAR yes 5276634
chr3 122379826 122379833 FOXP3 JASPAR yes 5276635
chr3 122379826 122379833 FOXD2 JASPAR yes 71039503
chr3 122379826 122379833 FOXI1 JASPAR yes 71039504
chr3 122379826 122379833 FOXL1 JASPAR yes 71039505
chr3 122379826 122379833 FOXO4 JASPAR yes 71039506
chr3 122379826 122379833 FOXO6 JASPAR yes 71039507
chr3 122379826 122379833 FOXP3 JASPAR yes 71039508
chr3 122379826 122379834 FOXO3 JASPAR yes 5276636
chr3 122379826 122379834 FOXO3 JASPAR yes 71039509
chr3 122379830 122379840 MAX JASPAR yes 5276637
chr3 122379830 122379840 MAX JASPAR yes 71039510
chr3 122379831 122379841 MAX JASPAR yes 5276638
chr3 122379831 122379841 MLXIPL JASPAR yes 5276639
chr3 122379831 122379841 MLX JASPAR yes 5276640
chr3 122379831 122379841 MNT JASPAR yes 5276641
chr3 122379831 122379841 TFE3 JASPAR yes 5276642
chr3 122379831 122379841 MAX JASPAR yes 71039511
chr3 122379831 122379841 MLXIPL JASPAR yes 71039512
chr3 122379831 122379841 MLX JASPAR yes 71039513
chr3 122379831 122379841 MNT JASPAR yes 71039514
chr3 122379831 122379841 TFE3 JASPAR yes 71039515
chr3 122379832 122379839 USF1 JASPAR yes 5276643
chr3 122379832 122379839 USF1 JASPAR yes 71039516
chr3 122379833 122379838 MYC TRANSFAC yes 5276644
chr3 122379833 122379838 USF1 TRANSFAC yes 5276645
chr3 122379833 122379838 USF2 TRANSFAC yes 5276646
chr3 122379833 122379838 MYC TRANSFAC yes 71039517
chr3 122379833 122379838 USF1 TRANSFAC yes 71039518
chr3 122379833 122379838 USF2 TRANSFAC yes 71039519
chr3 122379856 122379870 RXRB JASPAR yes 5276647
chr3 122379856 122379870 RXRG JASPAR yes 5276648
chr3 122379856 122379870 RXRB JASPAR yes 71039520
chr3 122379856 122379870 RXRG JASPAR yes 71039521
chr3 122379870 122379888 MAFF JASPAR yes 5276649
chr3 122379870 122379888 MAFF JASPAR yes 71039522
chr3 122379872 122379887 MAFK JASPAR yes 5276650
chr3 122379872 122379887 MAFK JASPAR yes 71039523
chr3 122379882 122379893 HOXC12 JASPAR yes 5276651
chr3 122379882 122379893 HOXC12 JASPAR yes 71039524
chr3 122379939 122379942 MYB TRANSFAC yes 5276652
chr3 122379939 122379942 MYB TRANSFAC yes 71039525
chr3 122379950 122379959 NKX2-8 JASPAR yes 5276653
chr3 122379950 122379959 NKX2-8 JASPAR yes 71039526
SNP sites on vista42169[chr3:122379671-122379962]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 122379712 rs144960920 C T
CTCF RAD21
6987764
chr3 122379734 rs117973888 C T
CTCF RAD21 RREB1
6987765
Genes possibly regulated by vista42169[chr3:122379671-122379962]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 122246771 122283424 - PARP9 ENSG00000138496.12 122283424 0.71 1.0 4005 3753
chr3 122283085 122294050 + DTX3L ENSG00000163840.5 122283085 0.68 0.99 4006 3414
chr3 122296449 122357894 + PARP15 ENSG00000173200.8 122296449 0.94 0.97 4007 16778
chr3 122399465 122449687 + PARP14 ENSG00000173193.9 122399465 0.82 0.99 4008 80497
Expression level of Genes
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miRNAs possibly regulated by vista42169[chr3:122379671-122379962]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results