EnhancerDB
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  3. vista42171[chr3:122400701-122401439]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42171[chr3:122400701-122401439]
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Tissue distribution of vista42171
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Transcription factor that possibly regulate vista42171[chr3:122400701-122401439]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 122400702 122400707 ETS2 TRANSFAC yes 71039555
chr3 122400732 122400736 LFA1 TRANSFAC yes 71039556
chr3 122400739 122400746 NFATC2 JASPAR yes 71039557
chr3 122400752 122400772 PPARG JASPAR yes 71039558
chr3 122400768 122400772 NFE TRANSFAC yes 71039559
chr3 122400787 122400808 IRF1 JASPAR yes 71039560
chr3 122400790 122400804 SPI1 JASPAR yes 71039561
chr3 122400791 122400805 IRF7 JASPAR yes 71039562
chr3 122400791 122400805 IRF8 JASPAR yes 71039563
chr3 122400794 122400809 LEF1 JASPAR yes 71039564
chr3 122400795 122400809 TCF7L2 JASPAR yes 71039565
chr3 122400855 122400868 JUN JASPAR yes 71039566
chr3 122400868 122400876 BARX1 JASPAR yes 71039567
chr3 122400868 122400876 EN1 JASPAR yes 71039568
chr3 122400868 122400876 ISL2 JASPAR yes 71039569
chr3 122400868 122400876 MSX1 JASPAR yes 71039570
chr3 122400868 122400876 MSX2 JASPAR yes 71039571
chr3 122400868 122400876 PDX1 JASPAR yes 71039572
chr3 122400895 122400910 PRDM1 JASPAR yes 71039573
chr3 122400897 122400918 IRF1 JASPAR yes 71039574
chr3 122400898 122400903 ETS2 TRANSFAC yes 71039575
chr3 122400899 122400914 IRF9 JASPAR yes 71039576
chr3 122400901 122400915 STAT1 JASPAR yes 71039577
chr3 122400901 122400916 STAT2 JASPAR yes 71039578
chr3 122400901 122400919 IRF2 JASPAR yes 71039579
chr3 122400902 122400914 IRF1 JASPAR yes 71039580
chr3 122400903 122400924 IRF1 JASPAR yes 71039581
chr3 122400905 122400920 IRF9 JASPAR yes 71039582
chr3 122400906 122400920 IRF7 JASPAR yes 71039583
chr3 122400906 122400920 IRF8 JASPAR yes 71039584
chr3 122400909 122400930 IRF1 JASPAR yes 71039585
chr3 122400932 122400953 ZNF263 JASPAR yes 71039586
chr3 122400933 122400938 ETS2 TRANSFAC yes 71039587
chr3 122400933 122400941 EHF JASPAR yes 71039588
chr3 122400933 122400954 ZNF263 JASPAR yes 71039589
chr3 122400937 122400942 ETS2 TRANSFAC yes 71039590
chr3 122400937 122400945 EHF JASPAR yes 71039591
chr3 122400940 122400950 SP1 JASPAR yes 71039592
chr3 122400940 122400961 ZNF263 JASPAR yes 71039593
chr3 122400943 122400953 MZF1 JASPAR yes 71039594
chr3 122400964 122400978 TLX1 JASPAR yes 71039595
chr3 122400977 122400992 FOXP1 JASPAR yes 71039596
chr3 122400979 122400990 FOXC1 JASPAR yes 71039597
chr3 122400979 122400991 FOXC2 JASPAR yes 71039598
chr3 122400980 122400991 FOXP2 JASPAR yes 71039599
chr3 122400980 122400994 IRF7 JASPAR yes 71039600
chr3 122400981 122400989 FOXO3 JASPAR yes 71039601
chr3 122400982 122400991 SRY JASPAR yes 71039602
chr3 122400985 122401001 SOX8 JASPAR yes 71039603
chr3 122400996 122401007 FOXC1 JASPAR yes 71039604
chr3 122400997 122401005 FOXO3 JASPAR yes 71039605
chr3 122400997 122401008 FOXA1 JASPAR yes 71039606
chr3 122400997 122401014 BCL6B JASPAR yes 71039607
chr3 122401005 122401015 GSC2 JASPAR yes 71039608
chr3 122401006 122401014 OTX1 JASPAR yes 71039609
chr3 122401006 122401014 OTX2 JASPAR yes 71039610
chr3 122401006 122401015 PITX3 JASPAR yes 71039611
chr3 122401036 122401040 LFA1 TRANSFAC yes 71039612
chr3 122401048 122401059 BATF JASPAR yes 71039613
chr3 122401050 122401061 FOS JASPAR yes 71039614
chr3 122401050 122401061 FOSL1 JASPAR yes 71039615
chr3 122401050 122401061 JUND JASPAR yes 71039616
chr3 122401051 122401060 JDP2 JASPAR yes 71039617
chr3 122401051 122401062 FOSL2 JASPAR yes 71039618
chr3 122401051 122401062 JUNB JASPAR yes 71039619
chr3 122401051 122401065 JUN JASPAR yes 71039620
chr3 122401052 122401063 BATF JASPAR yes 71039621
chr3 122401057 122401061 YY1 TRANSFAC yes 71039622
chr3 122401065 122401083 IRF2 JASPAR yes 71039623
chr3 122401070 122401082 IRF1 JASPAR yes 71039624
chr3 122401080 122401085 ETS2 TRANSFAC yes 71039625
chr3 122401087 122401098 NFKB1 JASPAR yes 71039626
chr3 122401087 122401100 NFKB1 JASPAR yes 71039627
chr3 122401087 122401100 NFKB2 JASPAR yes 71039628
chr3 122401088 122401099 NFKB1 JASPAR yes 71039629
chr3 122401094 122401100 MZF1 JASPAR yes 71039630
chr3 122401103 122401118 HNF4G JASPAR yes 71039631
chr3 122401103 122401118 NR2C2 JASPAR yes 71039632
chr3 122401104 122401118 NR2F1 JASPAR yes 71039633
chr3 122401104 122401118 RXRB JASPAR yes 71039634
chr3 122401104 122401118 RXRG JASPAR yes 71039635
chr3 122401104 122401119 HNF4A JASPAR yes 71039636
chr3 122401107 122401127 ESR1 JASPAR yes 71039637
chr3 122401109 122401122 NR2F1 JASPAR yes 71039638
chr3 122401112 122401127 ESR2 JASPAR yes 71039639
chr3 122401112 122401132 ESR1 JASPAR yes 71039640
chr3 122401113 122401117 ESR1 TRANSFAC yes 71039641
chr3 122401148 122401163 PRDM1 JASPAR yes 71039642
chr3 122401162 122401173 DUX4 JASPAR yes 71039643
chr3 122401168 122401172 YY1 TRANSFAC yes 71039644
chr3 122401171 122401176 GATA2 JASPAR yes 71039645
chr3 122401177 122401191 RORA JASPAR yes 71039646
chr3 122401189 122401199 RORA JASPAR yes 71039647
chr3 122401199 122401210 FOSL2 JASPAR yes 71039648
chr3 122401199 122401210 JUNB JASPAR yes 71039649
chr3 122401200 122401206 JUN TRANSFAC yes 71039650
chr3 122401203 122401213 FIGLA JASPAR yes 71039651
chr3 122401205 122401210 USF2 TRANSFAC yes 71039652
chr3 122401212 122401232 ESR1 JASPAR yes 71039653
chr3 122401219 122401229 HMBOX1 JASPAR yes 71039654
chr3 122401221 122401224 MYB TRANSFAC yes 71039655
chr3 122401251 122401266 IRF9 JASPAR yes 71039656
chr3 122401266 122401287 ZNF263 JASPAR yes 71039657
chr3 122401271 122401281 SP1 JASPAR yes 71039658
chr3 122401274 122401279 SP1 TRANSFAC yes 71039659
chr3 122401277 122401288 E2F6 JASPAR yes 71039660
chr3 122401278 122401283 SP1 TRANSFAC yes 71039661
chr3 122401281 122401286 ETS2 TRANSFAC yes 71039662
chr3 122401291 122401295 YY1 TRANSFAC yes 71039663
chr3 122401295 122401298 MYB TRANSFAC yes 71039664
chr3 122401305 122401316 USF1 JASPAR yes 71039665
chr3 122401305 122401316 USF2 JASPAR yes 71039666
chr3 122401307 122401320 NR2F1 JASPAR yes 71039667
chr3 122401311 122401321 RORA JASPAR yes 71039668
chr3 122401338 122401344 ETS1 JASPAR yes 71039669
chr3 122401340 122401352 HNF1B JASPAR yes 71039670
chr3 122401343 122401363 PPARG JASPAR yes 71039671
chr3 122401354 122401357 MYB TRANSFAC yes 71039672
chr3 122401376 122401386 MNX1 JASPAR yes 71039673
chr3 122401380 122401392 POU2F1 JASPAR yes 71039674
chr3 122401380 122401393 POU3F3 JASPAR yes 71039675
chr3 122401380 122401394 POU1F1 JASPAR yes 71039676
chr3 122401381 122401393 POU3F1 JASPAR yes 71039677
chr3 122401381 122401393 POU3F2 JASPAR yes 71039678
chr3 122401381 122401394 POU2F2 JASPAR yes 71039679
chr3 122401398 122401411 POU2F2 JASPAR yes 71039680
chr3 122401403 122401418 MEF2C JASPAR yes 71039681
chr3 122401406 122401418 FOXI1 JASPAR yes 71039682
chr3 122401417 122401423 SOX10 JASPAR yes 71039683
chr3 122401423 122401427 TEAD2 TRANSFAC yes 71039684
SNP sites on vista42171[chr3:122400701-122401439]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 122400773 rs115276793 C G no 6987909
chr3 122400790 rs790107 C A
IRF1 SPI1
6987910
chr3 122400933 rs790106 G C
EHF ETS2 ZNF263
6987911
chr3 122400960 rs790105 T C
ZNF263
6987912
chr3 122401183 rs577720655 G A
RORA
6987913
chr3 122401234 rs556608432 T C no 6987914
Genes possibly regulated by vista42171[chr3:122400701-122401439]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 122399465 122449687 + PARP14 ENSG00000173193.9 122399465 0.82 0.99 4008 98764
Expression level of Genes
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miRNAs possibly regulated by vista42171[chr3:122400701-122401439]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results