EnhancerDB
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  3. vista42175[chr3:122476470-122476801]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42175[chr3:122476470-122476801]
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Tissue distribution of vista42175
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Transcription factor that possibly regulate vista42175[chr3:122476470-122476801]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 122476490 122476493 MYB TRANSFAC yes 71039794
chr3 122476490 122476500 MAX JASPAR yes 71039795
chr3 122476491 122476501 CLOCK JASPAR yes 71039796
chr3 122476498 122476502 H4TF2 TRANSFAC yes 71039797
chr3 122476513 122476518 GATA2 JASPAR yes 71039798
chr3 122476523 122476538 FOXA1 JASPAR yes 71039799
chr3 122476524 122476529 GATA2 JASPAR yes 71039800
chr3 122476526 122476537 FOXB1 JASPAR yes 71039801
chr3 122476526 122476537 FOXC1 JASPAR yes 71039802
chr3 122476527 122476531 YY1 TRANSFAC yes 71039803
chr3 122476539 122476555 POU4F2 JASPAR yes 71039804
chr3 122476540 122476544 YY1 TRANSFAC yes 71039805
chr3 122476541 122476551 HOXA13 JASPAR yes 71039806
chr3 122476541 122476551 HOXD13 JASPAR yes 71039807
chr3 122476541 122476552 HOXA10 JASPAR yes 71039808
chr3 122476542 122476551 CDX1 JASPAR yes 71039809
chr3 122476542 122476553 CDX2 JASPAR yes 71039810
chr3 122476555 122476566 NFIL3 JASPAR yes 71039811
chr3 122476556 122476568 DBP JASPAR yes 71039812
chr3 122476556 122476568 HLF JASPAR yes 71039813
chr3 122476556 122476568 TEF JASPAR yes 71039814
chr3 122476558 122476569 NFIL3 JASPAR yes 71039815
chr3 122476558 122476570 SRF JASPAR yes 71039816
chr3 122476561 122476565 TEAD2 TRANSFAC yes 71039817
chr3 122476585 122476591 SOX10 JASPAR yes 71039818
chr3 122476608 122476611 MYB TRANSFAC yes 71039819
chr3 122476636 122476640 YY1 TRANSFAC yes 71039820
chr3 122476636 122476651 LEF1 JASPAR yes 71039821
chr3 122476637 122476651 TCF7L2 JASPAR yes 71039822
chr3 122476648 122476658 NFATC3 JASPAR yes 71039823
chr3 122476649 122476656 NFATC2 JASPAR yes 71039824
chr3 122476668 122476682 TLX1 JASPAR yes 71039825
chr3 122476669 122476683 TLX1 JASPAR yes 71039826
chr3 122476674 122476682 FOXO3 JASPAR yes 71039827
chr3 122476679 122476683 H1TF2 TRANSFAC yes 71039828
chr3 122476679 122476683 NFE TRANSFAC yes 71039829
chr3 122476679 122476683 SRF TRANSFAC yes 71039830
chr3 122476687 122476697 MAX JASPAR yes 71039831
chr3 122476721 122476727 MYC TRANSFAC yes 71039832
chr3 122476730 122476744 NR2F1 JASPAR yes 71039833
chr3 122476751 122476754 MYB TRANSFAC yes 71039834
chr3 122476762 122476767 GATA2 JASPAR yes 71039835
chr3 122476767 122476779 GLI2 JASPAR yes 71039836
chr3 122476767 122476782 RUNX2 JASPAR yes 71039837
SNP sites on vista42175[chr3:122476470-122476801]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 122476515 rs4678210 G A
GATA2
6988158
chr3 122476605 rs371102734 A G,T no 6988159
chr3 122476782 rs10511414 C T
RUNX2
6988160
Genes possibly regulated by vista42175[chr3:122476470-122476801]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 122399465 122449687 + PARP14 ENSG00000173193.9 122399465 0.82 0.99 4008 22995
chr3 122458846 122512671 - HSPBAP1 ENSG00000169087.6 122512671 0.66 0.99 4009 64130
chr3 122513642 122599986 + DIRC2 ENSG00000138463.8 122513642 0.65 0.99 4010 63159
Expression level of Genes
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miRNAs possibly regulated by vista42175[chr3:122476470-122476801]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results