EnhancerDB
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  3. vista42187[chr3:122787344-122787648]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42187[chr3:122787344-122787648]
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Tissue distribution of vista42187
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Transcription factor that possibly regulate vista42187[chr3:122787344-122787648]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 122787347 122787362 TFAP2C JASPAR yes 71040335
chr3 122787348 122787359 EBF1 JASPAR yes 71040336
chr3 122787358 122787363 MYC TRANSFAC yes 71040337
chr3 122787368 122787373 SP1 TRANSFAC yes 71040338
chr3 122787369 122787374 SP1 TRANSFAC yes 71040339
chr3 122787387 122787394 CEBPA TRANSFAC yes 71040340
chr3 122787388 122787399 E2F6 JASPAR yes 71040341
chr3 122787397 122787401 NFE TRANSFAC yes 71040342
chr3 122787397 122787402 GATA1 TRANSFAC yes 71040343
chr3 122787397 122787403 GATA3 JASPAR yes 71040344
chr3 122787409 122787414 SP1 TRANSFAC yes 71040345
chr3 122787419 122787434 HNF4A JASPAR yes 71040346
chr3 122787420 122787435 HNF4G JASPAR yes 71040347
chr3 122787437 122787451 GLIS3 JASPAR yes 5298794
chr3 122787437 122787451 GLIS3 JASPAR yes 71040348
chr3 122787447 122787451 H4TF2 TRANSFAC yes 5298795
chr3 122787447 122787451 H4TF2 TRANSFAC yes 71040349
chr3 122787453 122787474 ZNF263 JASPAR yes 5298796
chr3 122787453 122787474 ZNF263 JASPAR yes 71040350
chr3 122787456 122787477 ZNF263 JASPAR yes 5298797
chr3 122787456 122787477 ZNF263 JASPAR yes 71040351
chr3 122787457 122787478 ZNF263 JASPAR yes 5298798
chr3 122787457 122787478 ZNF263 JASPAR yes 71040352
chr3 122787459 122787474 NR2C2 JASPAR yes 5298799
chr3 122787459 122787474 NR2C2 JASPAR yes 71040353
chr3 122787460 122787475 PRDM1 JASPAR yes 5298800
chr3 122787460 122787475 PRDM1 JASPAR yes 71040354
chr3 122787461 122787471 SP1 JASPAR yes 5298801
chr3 122787461 122787471 SP1 JASPAR yes 71040355
chr3 122787464 122787474 MZF1 JASPAR yes 5298802
chr3 122787464 122787474 MZF1 JASPAR yes 71040356
chr3 122787467 122787473 SP1 TRANSFAC yes 5298803
chr3 122787467 122787473 SP1 TRANSFAC yes 71040357
chr3 122787476 122787491 FOXP1 JASPAR yes 5298804
chr3 122787476 122787491 FOXP1 JASPAR yes 71040358
chr3 122787478 122787489 FOXC1 JASPAR yes 5298805
chr3 122787478 122787489 FOXC1 JASPAR yes 71040359
chr3 122787478 122787490 FOXC2 JASPAR yes 5298806
chr3 122787478 122787490 FOXC2 JASPAR yes 71040360
chr3 122787479 122787490 FOXP2 JASPAR yes 5298807
chr3 122787479 122787490 FOXP2 JASPAR yes 71040361
chr3 122787480 122787488 FOXO3 JASPAR yes 5298808
chr3 122787480 122787488 FOXO3 JASPAR yes 71040362
chr3 122787481 122787490 SRY JASPAR yes 5298809
chr3 122787481 122787490 SRY JASPAR yes 71040363
chr3 122787496 122787510 IRF8 JASPAR yes 5298810
chr3 122787496 122787510 IRF8 JASPAR yes 71040364
chr3 122787522 122787526 YY1 TRANSFAC yes 5298811
chr3 122787522 122787526 YY1 TRANSFAC yes 71040365
chr3 122787526 122787530 YY1 TRANSFAC yes 5298812
chr3 122787526 122787530 YY1 TRANSFAC yes 71040366
chr3 122787531 122787546 SOX21 JASPAR yes 5298813
chr3 122787531 122787546 SOX21 JASPAR yes 71040367
chr3 122787545 122787557 PBX1 JASPAR yes 5298814
chr3 122787545 122787557 PBX1 JASPAR yes 71040368
chr3 122787548 122787566 RARA JASPAR yes 5298815
chr3 122787548 122787566 RARA JASPAR yes 71040369
chr3 122787554 122787558 YY1 TRANSFAC yes 5298816
chr3 122787554 122787558 YY1 TRANSFAC yes 71040370
chr3 122787579 122787591 E2F8 JASPAR yes 5298817
chr3 122787579 122787591 E2F8 JASPAR yes 71040371
chr3 122787582 122787587 SP1 TRANSFAC yes 5298818
chr3 122787582 122787587 SP1 TRANSFAC yes 71040372
chr3 122787594 122787600 HiNF-A TRANSFAC yes 5298819
chr3 122787594 122787600 HiNF-A TRANSFAC yes 71040373
chr3 122787594 122787611 NR3C1 JASPAR yes 5298820
chr3 122787594 122787611 NR3C2 JASPAR yes 5298821
chr3 122787594 122787611 NR3C1 JASPAR yes 71040374
chr3 122787594 122787611 NR3C2 JASPAR yes 71040375
chr3 122787596 122787611 AR JASPAR yes 5298822
chr3 122787596 122787611 AR JASPAR yes 71040376
chr3 122787630 122787635 NFY TRANSFAC yes 5298823
chr3 122787630 122787635 NFY TRANSFAC yes 71040377
chr3 122787634 122787638 LFA1 TRANSFAC yes 5298824
chr3 122787634 122787638 LFA1 TRANSFAC yes 71040378
SNP sites on vista42187[chr3:122787344-122787648]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 122787513 rs7614797 A T no 6989913
chr3 122787587 rs150696088 G A
E2F8 SP1
6989914
Genes possibly regulated by vista42187[chr3:122787344-122787648]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 122628041 122747452 - SEMA5B ENSG00000082684.10 122747452 0.96 0.99 4011 60108
chr3 122785909 122944074 + PDIA5 ENSG00000065485.13 122785909 0.79 1.0 4012 98565
Expression level of Genes
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miRNAs possibly regulated by vista42187[chr3:122787344-122787648]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results