EnhancerDB
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  3. vista42190[chr3:122988091-122988383]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42190[chr3:122988091-122988383]
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Tissue distribution of vista42190
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Transcription factor that possibly regulate vista42190[chr3:122988091-122988383]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 122988098 122988108 TEAD1 JASPAR yes 71040447
chr3 122988098 122988108 TEAD4 JASPAR yes 71040448
chr3 122988098 122988110 TEAD1 JASPAR yes 71040449
chr3 122988099 122988107 TEAD3 JASPAR yes 71040450
chr3 122988101 122988112 STAT3 JASPAR yes 71040451
chr3 122988106 122988117 CDX2 JASPAR yes 71040452
chr3 122988107 122988118 HOXA10 JASPAR yes 71040453
chr3 122988108 122988117 CDX1 JASPAR yes 71040454
chr3 122988108 122988118 HOXA13 JASPAR yes 71040455
chr3 122988108 122988118 HOXB13 JASPAR yes 71040456
chr3 122988108 122988118 HOXD13 JASPAR yes 71040457
chr3 122988110 122988122 MEF2A JASPAR yes 71040458
chr3 122988110 122988122 MEF2B JASPAR yes 71040459
chr3 122988110 122988122 MEF2D JASPAR yes 71040460
chr3 122988111 122988121 MEF2A JASPAR yes 71040461
chr3 122988119 122988127 GATA3 JASPAR yes 71040462
chr3 122988119 122988140 IRF1 JASPAR yes 71040463
chr3 122988122 122988128 TBP TRANSFAC yes 71040464
chr3 122988125 122988138 POU3F3 JASPAR yes 71040465
chr3 122988127 122988137 NFATC3 JASPAR yes 71040466
chr3 122988127 122988138 FOXB1 JASPAR yes 71040467
chr3 122988135 122988139 TEAD2 TRANSFAC yes 71040468
chr3 122988135 122988140 TBP TRANSFAC yes 71040469
chr3 122988135 122988141 TFIID TRANSFAC yes 71040470
chr3 122988146 122988150 YY1 TRANSFAC yes 71040471
chr3 122988155 122988170 RUNX2 JASPAR yes 71040472
chr3 122988160 122988176 SOX8 JASPAR yes 71040473
chr3 122988182 122988196 POU4F1 JASPAR yes 71040474
chr3 122988182 122988198 POU4F2 JASPAR yes 71040475
chr3 122988182 122988198 POU4F3 JASPAR yes 71040476
chr3 122988185 122988199 POU4F1 JASPAR yes 71040477
chr3 122988188 122988192 YY1 TRANSFAC yes 71040478
chr3 122988195 122988200 GATA2 JASPAR yes 71040479
chr3 122988199 122988211 MEF2A JASPAR yes 71040480
chr3 122988199 122988211 MEF2B JASPAR yes 71040481
chr3 122988199 122988211 MEF2D JASPAR yes 71040482
chr3 122988200 122988210 MEF2A JASPAR yes 71040483
chr3 122988204 122988215 HOXC13 JASPAR yes 71040484
chr3 122988205 122988215 EMX1 JASPAR yes 71040485
chr3 122988206 122988214 NKX6-1 JASPAR yes 71040486
chr3 122988206 122988214 NKX6-2 JASPAR yes 71040487
chr3 122988206 122988216 POU6F2 JASPAR yes 71040488
chr3 122988216 122988234 MAFF JASPAR yes 71040489
chr3 122988220 122988235 JUND JASPAR yes 71040490
chr3 122988225 122988239 GATA2 JASPAR yes 71040491
chr3 122988227 122988235 GATA3 JASPAR yes 71040492
chr3 122988227 122988235 GATA5 JASPAR yes 71040493
chr3 122988234 122988245 FOXB1 JASPAR yes 71040494
chr3 122988253 122988263 SP1 JASPAR yes 71040495
chr3 122988254 122988264 SP1 JASPAR yes 71040496
chr3 122988256 122988262 NFE2 TRANSFAC yes 71040497
chr3 122988257 122988269 INSM1 JASPAR yes 71040498
chr3 122988275 122988281 TCF4 TRANSFAC yes 71040499
chr3 122988300 122988315 JUND JASPAR yes 71040500
chr3 122988301 122988314 JUN JASPAR yes 71040501
chr3 122988304 122988318 RORA JASPAR yes 71040502
chr3 122988305 122988316 PHOX2A JASPAR yes 71040503
chr3 122988309 122988325 POU4F2 JASPAR yes 71040504
chr3 122988309 122988325 POU4F3 JASPAR yes 71040505
chr3 122988310 122988321 PHOX2A JASPAR yes 71040506
chr3 122988310 122988321 PROP1 JASPAR yes 71040507
chr3 122988311 122988325 POU4F1 JASPAR yes 71040508
chr3 122988312 122988327 HNF1A JASPAR yes 71040509
chr3 122988314 122988326 HNF1B JASPAR yes 71040510
chr3 122988315 122988327 HLF JASPAR yes 71040511
chr3 122988316 122988334 TP53 JASPAR yes 71040512
chr3 122988316 122988334 TP63 JASPAR yes 71040513
chr3 122988317 122988328 NFIL3 JASPAR yes 71040514
chr3 122988317 122988332 TP53 JASPAR yes 71040515
chr3 122988325 122988328 MYB TRANSFAC yes 71040516
chr3 122988332 122988344 HLF JASPAR yes 71040517
chr3 122988355 122988364 NFIX JASPAR yes 71040518
chr3 122988355 122988365 NFIA JASPAR yes 71040519
chr3 122988357 122988363 NFIC JASPAR yes 71040520
chr3 122988363 122988375 HLF JASPAR yes 71040521
chr3 122988368 122988372 TEAD2 TRANSFAC yes 71040522
chr3 122988370 122988373 MYB TRANSFAC yes 71040523
chr3 122988370 122988381 RUNX1 JASPAR yes 71040524
chr3 122988376 122988380 YY1 TRANSFAC yes 71040525
SNP sites on vista42190[chr3:122988091-122988383]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 122988220 rs9849831 G A
JUND MAFF
6990782
chr3 122988297 rs148702746 CTTA C no 6990783
chr3 122988338 rs113064411 C G,T
HLF
6990784
chr3 122988339 rs78032243 G A,C,T
HLF
6990785
Genes possibly regulated by vista42190[chr3:122988091-122988383]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 122920774 122992977 + SEC22A ENSG00000121542.7 122920774 0.66 0.97 4013 32683
Expression level of Genes
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miRNAs possibly regulated by vista42190[chr3:122988091-122988383]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results