EnhancerDB
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  3. vista42199[chr3:123241172-123241525]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42199[chr3:123241172-123241525]
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Tissue distribution of vista42199
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Transcription factor that possibly regulate vista42199[chr3:123241172-123241525]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 123241174 123241195 IRF1 JASPAR yes 5322535
chr3 123241174 123241195 IRF1 JASPAR yes 71040779
chr3 123241175 123241190 FOXP1 JASPAR yes 5322536
chr3 123241175 123241190 FOXP1 JASPAR yes 71040780
chr3 123241175 123241195 RREB1 JASPAR yes 5322537
chr3 123241175 123241195 RREB1 JASPAR yes 71040781
chr3 123241175 123241196 IRF1 JASPAR yes 5322538
chr3 123241175 123241196 IRF1 JASPAR yes 71040782
chr3 123241176 123241191 FOXP1 JASPAR yes 5322539
chr3 123241176 123241191 FOXP1 JASPAR yes 71040783
chr3 123241176 123241197 IRF1 JASPAR yes 5322540
chr3 123241176 123241197 IRF1 JASPAR yes 71040784
chr3 123241177 123241192 FOXP1 JASPAR yes 5322541
chr3 123241177 123241192 FOXP1 JASPAR yes 71040785
chr3 123241178 123241193 FOXP1 JASPAR yes 5322542
chr3 123241178 123241193 FOXP1 JASPAR yes 71040786
chr3 123241178 123241199 IRF1 JASPAR yes 5322543
chr3 123241178 123241199 IRF1 JASPAR yes 71040787
chr3 123241179 123241194 FOXP1 JASPAR yes 5322544
chr3 123241179 123241194 FOXP1 JASPAR yes 71040788
chr3 123241179 123241200 IRF1 JASPAR yes 5322545
chr3 123241179 123241200 IRF1 JASPAR yes 71040789
chr3 123241180 123241195 FOXP1 JASPAR yes 5322546
chr3 123241180 123241195 FOXP1 JASPAR yes 71040790
chr3 123241180 123241201 IRF1 JASPAR yes 5322547
chr3 123241180 123241201 IRF1 JASPAR yes 71040791
chr3 123241181 123241196 FOXP1 JASPAR yes 5322548
chr3 123241181 123241196 FOXP1 JASPAR yes 71040792
chr3 123241181 123241202 IRF1 JASPAR yes 5322549
chr3 123241181 123241202 IRF1 JASPAR yes 71040793
chr3 123241182 123241197 FOXP1 JASPAR yes 5322550
chr3 123241182 123241197 FOXP1 JASPAR yes 71040794
chr3 123241183 123241204 IRF1 JASPAR yes 5322551
chr3 123241183 123241204 IRF1 JASPAR yes 71040795
chr3 123241184 123241199 FOXP1 JASPAR yes 5322552
chr3 123241184 123241199 FOXP1 JASPAR yes 71040796
chr3 123241185 123241200 STAT2 JASPAR yes 5322553
chr3 123241185 123241200 STAT2 JASPAR yes 71040797
chr3 123241185 123241206 IRF1 JASPAR yes 5322554
chr3 123241185 123241206 IRF1 JASPAR yes 71040798
chr3 123241186 123241201 FOXP1 JASPAR yes 5322555
chr3 123241186 123241201 FOXP1 JASPAR yes 71040799
chr3 123241187 123241208 IRF1 JASPAR yes 5322556
chr3 123241187 123241208 IRF1 JASPAR yes 71040800
chr3 123241191 123241206 PRDM1 JASPAR yes 5322557
chr3 123241191 123241206 PRDM1 JASPAR yes 71040801
chr3 123241191 123241212 IRF1 JASPAR yes 5322558
chr3 123241191 123241212 IRF1 JASPAR yes 71040802
chr3 123241192 123241213 ZNF263 JASPAR yes 5322559
chr3 123241192 123241213 ZNF263 JASPAR yes 71040803
chr3 123241193 123241214 IRF1 JASPAR yes 5322560
chr3 123241193 123241214 IRF1 JASPAR yes 71040804
chr3 123241195 123241210 PRDM1 JASPAR yes 5322561
chr3 123241195 123241210 PRDM1 JASPAR yes 71040805
chr3 123241206 123241220 STAT1 JASPAR yes 5322562
chr3 123241206 123241220 STAT1 JASPAR yes 71040806
chr3 123241223 123241237 NR2F1 JASPAR yes 5322563
chr3 123241223 123241237 NR2F1 JASPAR yes 71040807
chr3 123241231 123241246 LEF1 JASPAR yes 5322564
chr3 123241231 123241246 LEF1 JASPAR yes 71040808
chr3 123241242 123241246 YY1 TRANSFAC yes 5322565
chr3 123241242 123241246 YY1 TRANSFAC yes 71040809
chr3 123241253 123241257 YY1 TRANSFAC yes 5322566
chr3 123241253 123241257 YY1 TRANSFAC yes 71040810
chr3 123241253 123241264 CEBPA JASPAR yes 5322567
chr3 123241253 123241264 CEBPA JASPAR yes 71040811
chr3 123241254 123241265 CEBPB JASPAR yes 5322568
chr3 123241254 123241265 CEBPB JASPAR yes 71040812
chr3 123241281 123241297 SOX4 JASPAR yes 5322569
chr3 123241281 123241297 SOX4 JASPAR yes 71040813
chr3 123241284 123241289 ETS2 TRANSFAC yes 5322570
chr3 123241284 123241289 ETS2 TRANSFAC yes 71040814
chr3 123241344 123241354 NFIA JASPAR yes 5322571
chr3 123241344 123241354 NFIA JASPAR yes 71040815
chr3 123241346 123241352 NFIC JASPAR yes 5322572
chr3 123241346 123241352 NFIC JASPAR yes 71040816
chr3 123241351 123241367 SRF JASPAR yes 5322573
chr3 123241351 123241367 SRF JASPAR yes 71040817
chr3 123241357 123241370 POU3F3 JASPAR yes 5322574
chr3 123241357 123241370 POU3F3 JASPAR yes 71040818
chr3 123241357 123241371 POU1F1 JASPAR yes 5322575
chr3 123241357 123241371 POU1F1 JASPAR yes 71040819
chr3 123241358 123241370 POU3F1 JASPAR yes 5322576
chr3 123241358 123241370 POU3F2 JASPAR yes 5322577
chr3 123241358 123241370 POU3F1 JASPAR yes 71040820
chr3 123241358 123241370 POU3F2 JASPAR yes 71040821
chr3 123241359 123241368 POU3F4 JASPAR yes 5322578
chr3 123241359 123241368 POU5F1B JASPAR yes 5322579
chr3 123241359 123241368 POU3F4 JASPAR yes 71040822
chr3 123241359 123241368 POU5F1B JASPAR yes 71040823
chr3 123241360 123241375 MEF2C JASPAR yes 5322580
chr3 123241360 123241375 MEF2C JASPAR yes 71040824
chr3 123241361 123241376 MEF2A JASPAR yes 5322581
chr3 123241361 123241376 MEF2A JASPAR yes 71040825
chr3 123241362 123241374 MEF2A JASPAR yes 5322582
chr3 123241362 123241374 MEF2B JASPAR yes 5322583
chr3 123241362 123241374 MEF2D JASPAR yes 5322584
chr3 123241362 123241374 MEF2A JASPAR yes 71040826
chr3 123241362 123241374 MEF2B JASPAR yes 71040827
chr3 123241362 123241374 MEF2D JASPAR yes 71040828
chr3 123241363 123241373 MEF2A JASPAR yes 5322585
chr3 123241363 123241373 MEF2A JASPAR yes 71040829
chr3 123241374 123241377 MYB TRANSFAC yes 5322586
chr3 123241374 123241377 MYB TRANSFAC yes 71040830
chr3 123241405 123241408 MYB TRANSFAC yes 5322587
chr3 123241405 123241408 MYB TRANSFAC yes 71040831
chr3 123241409 123241412 MYB TRANSFAC yes 5322588
chr3 123241409 123241412 MYB TRANSFAC yes 71040832
chr3 123241419 123241434 PRDM1 JASPAR yes 5322589
chr3 123241419 123241434 PRDM1 JASPAR yes 71040833
chr3 123241436 123241444 ISL2 JASPAR yes 5322590
chr3 123241436 123241444 ISL2 JASPAR yes 71040834
chr3 123241436 123241445 NKX3-2 JASPAR yes 5322591
chr3 123241436 123241445 NKX3-2 JASPAR yes 71040835
chr3 123241449 123241453 YY1 TRANSFAC yes 5322592
chr3 123241449 123241453 YY1 TRANSFAC yes 71040836
chr3 123241453 123241463 SMAD3 JASPAR yes 5322593
chr3 123241453 123241463 SMAD3 JASPAR yes 71040837
chr3 123241453 123241468 HSF1 JASPAR yes 5322594
chr3 123241453 123241468 HSF1 JASPAR yes 71040838
chr3 123241454 123241467 HSF2 JASPAR yes 5322595
chr3 123241454 123241467 HSF2 JASPAR yes 71040839
chr3 123241474 123241481 MEIS1 JASPAR yes 5322596
chr3 123241474 123241481 MEIS1 JASPAR yes 71040840
chr3 123241487 123241496 SRY JASPAR yes 5322597
chr3 123241487 123241496 SRY JASPAR yes 71040841
chr3 123241488 123241500 PBX1 JASPAR yes 5322598
chr3 123241488 123241500 PBX1 JASPAR yes 71040842
chr3 123241489 123241492 MYB TRANSFAC yes 5322599
chr3 123241489 123241492 MYB TRANSFAC yes 71040843
chr3 123241490 123241508 SRF JASPAR yes 5322600
chr3 123241490 123241508 SRF JASPAR yes 71040844
chr3 123241503 123241524 IRF1 JASPAR yes 5322601
chr3 123241503 123241524 IRF1 JASPAR yes 71040845
chr3 123241505 123241520 STAT2 JASPAR yes 5322602
chr3 123241505 123241520 STAT2 JASPAR yes 71040846
chr3 123241507 123241528 IRF1 JASPAR yes 5322603
chr3 123241507 123241528 IRF1 JASPAR yes 71040847
chr3 123241508 123241523 FOXP1 JASPAR yes 5322604
chr3 123241508 123241523 FOXP1 JASPAR yes 71040848
chr3 123241509 123241524 FOXP1 JASPAR yes 5322605
chr3 123241509 123241524 FOXP1 JASPAR yes 71040849
chr3 123241510 123241525 FOXP1 JASPAR yes 5322606
chr3 123241510 123241525 FOXP1 JASPAR yes 71040850
chr3 123241515 123241530 FOXP1 JASPAR yes 5322607
chr3 123241515 123241530 FOXP1 JASPAR yes 71040851
SNP sites on vista42199[chr3:123241172-123241525]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 123241195 rs564126231 A G
FOXP1 IRF1 PRDM1 RREB1 STAT2 ZNF263
6992128
chr3 123241280 rs2720315 A T no 6992129
chr3 123241302 rs563407058 G C no 6992130
chr3 123241428 rs1378804 A G,T
PRDM1
6992131
chr3 123241464 rs188644896 C T
HSF1 HSF2
6992132
chr3 123241504 rs547446821 G A
IRF1 SRF
6992133
chr3 123241509 rs10622875 C CT,CTT,CTTT
FOXP1 IRF1 STAT2
6992134
chr3 123241509 rs11392018 C CT,CTT
FOXP1 IRF1 STAT2
6992135
chr3 123241509 rs4048459 C CT,CTT
FOXP1 IRF1 STAT2
6992136
Genes possibly regulated by vista42199[chr3:123241172-123241525]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 123001143 123168605 - ADCY5 ENSG00000173175.10 123168605 0.93 0.99 4014 27433
chr3 123209667 123304032 - PTPLB ENSG00000206527.5 123304032 0.81 0.99 4015 37493
Expression level of Genes
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miRNAs possibly regulated by vista42199[chr3:123241172-123241525]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results