EnhancerDB
  1. Home
  2. Enhancers
  3. vista42201[chr3:123304962-123305362]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42201[chr3:123304962-123305362]
Back to top
Tissue distribution of vista42201
Back to top
Transcription factor that possibly regulate vista42201[chr3:123304962-123305362]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 123303271 123305531 POLR2A UCSC Txn Factor no Conserved 108530096
chr3 123304963 123304969 SOX10 JASPAR yes 71040897
chr3 123304983 123304991 RHOXF1 JASPAR yes 71040898
chr3 123305007 123305020 SCRT2 JASPAR yes 71040899
chr3 123305016 123305020 ESR1 TRANSFAC yes 71040900
chr3 123305024 123305038 IRF8 JASPAR yes 71040901
chr3 123305025 123305035 TFCP2 JASPAR yes 71040902
chr3 123305030 123305050 RREB1 JASPAR yes 71040903
chr3 123305034 123305054 RREB1 JASPAR yes 71040904
chr3 123305035 123305049 GLIS2 JASPAR yes 71040905
chr3 123305035 123305049 GLIS3 JASPAR yes 71040906
chr3 123305038 123305043 SP1 TRANSFAC yes 71040907
chr3 123305038 123305048 ZNF740 JASPAR yes 71040908
chr3 123305038 123305058 RREB1 JASPAR yes 71040909
chr3 123305039 123305049 SP1 JASPAR yes 71040910
chr3 123305039 123305049 ZNF740 JASPAR yes 71040911
chr3 123305041 123305051 ZNF740 JASPAR yes 71040912
chr3 123305045 123305061 ZNF143 JASPAR yes 71040913
chr3 123305047 123305053 ZNF354C JASPAR yes 71040914
chr3 123305069 123305075 TCF1 TRANSFAC yes 71040915
chr3 123305077 123305081 YY1 TRANSFAC yes 71040916
chr3 123305082 123305086 YY1 TRANSFAC yes 71040917
chr3 123305089 123305093 YY1 TRANSFAC yes 71040918
chr3 123305127 123305131 H1TF2 TRANSFAC yes 71040919
chr3 123305127 123305131 NFE TRANSFAC yes 71040920
chr3 123305127 123305131 SRF TRANSFAC yes 71040921
chr3 123305166 123305179 JUN JASPAR yes 71040922
chr3 123305167 123305180 ATF4 JASPAR yes 71040923
chr3 123305191 123305201 SP1 JASPAR yes 71040924
chr3 123305193 123305198 SP1 TRANSFAC yes 71040925
chr3 123305230 123305251 ZNF263 JASPAR yes 71040926
chr3 123305232 123305246 ZIC1 JASPAR yes 71040927
chr3 123305232 123305247 ZIC3 JASPAR yes 71040928
chr3 123305232 123305247 ZIC4 JASPAR yes 71040929
chr3 123305258 123305261 MYB TRANSFAC yes 71040930
chr3 123305270 123305275 NFY TRANSFAC yes 71040931
chr3 123305278 123305282 NFE TRANSFAC yes 71040932
chr3 123305279 123305284 GATA2 JASPAR yes 71040933
chr3 123305285 123305300 TFAP2C JASPAR yes 71040934
chr3 123305286 123305297 TFAP2A JASPAR yes 71040935
chr3 123305286 123305297 TFAP2B JASPAR yes 71040936
chr3 123305286 123305297 TFAP2C JASPAR yes 71040937
chr3 123305287 123305296 TFAP2A JASPAR yes 71040938
chr3 123305302 123305317 TFAP2A JASPAR yes 71040939
chr3 123305302 123305317 TFAP2C JASPAR yes 71040940
SNP sites on vista42201[chr3:123304962-123305362]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 123305082 rs375928204 ACATTT A
POLR2A YY1
6992569
chr3 123305209 rs149122665 G A
POLR2A
6992570
chr3 123305264 rs114687580 G A
POLR2A
6992571
chr3 123305322 rs820467 G A,C
POLR2A
6992572
Genes possibly regulated by vista42201[chr3:123304962-123305362]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 123209667 123304032 - PTPLB ENSG00000206527.5 123304032 0.81 0.99 4015 99070
Expression level of Genes
Back to top
miRNAs possibly regulated by vista42201[chr3:123304962-123305362]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results