EnhancerDB
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  3. vista42209[chr3:123372011-123372488]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42209[chr3:123372011-123372488]
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Tissue distribution of vista42209
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Transcription factor that possibly regulate vista42209[chr3:123372011-123372488]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 123372257 123372510 CEBPB UCSC Txn Factor no Conserved 108530110
chr3 123372015 123372023 RHOXF1 JASPAR yes 5332607
chr3 123372015 123372023 RHOXF1 JASPAR yes 71041249
chr3 123372019 123372040 ZNF263 JASPAR yes 5332608
chr3 123372019 123372040 ZNF263 JASPAR yes 71041250
chr3 123372039 123372045 HiNF-A TRANSFAC yes 5332609
chr3 123372039 123372045 HiNF-A TRANSFAC yes 71041251
chr3 123372044 123372054 RORA JASPAR yes 5332610
chr3 123372044 123372054 RORA JASPAR yes 71041252
chr3 123372057 123372065 MEIS3 JASPAR yes 5332611
chr3 123372057 123372065 MEIS3 JASPAR yes 71041253
chr3 123372058 123372062 NFE TRANSFAC yes 5332612
chr3 123372058 123372062 NFE TRANSFAC yes 71041254
chr3 123372065 123372073 RHOXF1 JASPAR yes 5332613
chr3 123372065 123372073 RHOXF1 JASPAR yes 71041255
chr3 123372069 123372077 TBX15 JASPAR yes 5332614
chr3 123372069 123372077 TBX15 JASPAR yes 71041256
chr3 123372080 123372086 NFIC JASPAR yes 5332615
chr3 123372080 123372086 NFIC JASPAR yes 71041257
chr3 123372080 123372100 RREB1 JASPAR yes 5332616
chr3 123372080 123372100 RREB1 JASPAR yes 71041258
chr3 123372082 123372102 RREB1 JASPAR yes 5332617
chr3 123372082 123372102 RREB1 JASPAR yes 71041259
chr3 123372096 123372106 BHLHE40 JASPAR yes 5332618
chr3 123372096 123372106 HEY1 JASPAR yes 5332619
chr3 123372096 123372106 HEY2 JASPAR yes 5332620
chr3 123372096 123372106 BHLHE40 JASPAR yes 71041260
chr3 123372096 123372106 HEY1 JASPAR yes 71041261
chr3 123372096 123372106 HEY2 JASPAR yes 71041262
chr3 123372096 123372110 PAX6 JASPAR yes 5332621
chr3 123372096 123372110 PAX6 JASPAR yes 71041263
chr3 123372098 123372103 MYC TRANSFAC yes 5332622
chr3 123372098 123372103 USF1 TRANSFAC yes 5332623
chr3 123372098 123372103 USF2 TRANSFAC yes 5332624
chr3 123372098 123372103 MYC TRANSFAC yes 71041264
chr3 123372098 123372103 USF1 TRANSFAC yes 71041265
chr3 123372098 123372103 USF2 TRANSFAC yes 71041266
chr3 123372102 123372120 TP73 JASPAR yes 5332625
chr3 123372102 123372120 TP73 JASPAR yes 71041267
chr3 123372134 123372138 YY1 TRANSFAC yes 5332626
chr3 123372134 123372138 YY1 TRANSFAC yes 71041268
chr3 123372155 123372161 YY1 JASPAR yes 5332627
chr3 123372155 123372161 YY1 JASPAR yes 71041269
chr3 123372172 123372176 TEAD2 TRANSFAC yes 5332628
chr3 123372172 123372176 TEAD2 TRANSFAC yes 71041270
chr3 123372174 123372177 MYB TRANSFAC yes 5332629
chr3 123372174 123372177 MYB TRANSFAC yes 71041271
chr3 123372178 123372181 MYB TRANSFAC yes 5332630
chr3 123372178 123372181 MYB TRANSFAC yes 71041272
chr3 123372207 123372224 BCL6B JASPAR yes 5332631
chr3 123372207 123372224 BCL6B JASPAR yes 71041273
chr3 123372210 123372221 STAT3 JASPAR yes 5332632
chr3 123372210 123372221 STAT3 JASPAR yes 71041274
chr3 123372238 123372253 TFAP2A JASPAR yes 5332633
chr3 123372238 123372253 TFAP2C JASPAR yes 5332634
chr3 123372238 123372253 TFAP2A JASPAR yes 71041275
chr3 123372238 123372253 TFAP2C JASPAR yes 71041276
chr3 123372239 123372248 THAP1 JASPAR yes 5332635
chr3 123372239 123372248 THAP1 JASPAR yes 71041277
chr3 123372240 123372252 TFAP2A JASPAR yes 5332636
chr3 123372240 123372252 TFAP2B JASPAR yes 5332637
chr3 123372240 123372252 TFAP2C JASPAR yes 5332638
chr3 123372240 123372252 TFAP2A JASPAR yes 71041278
chr3 123372240 123372252 TFAP2B JASPAR yes 71041279
chr3 123372240 123372252 TFAP2C JASPAR yes 71041280
chr3 123372240 123372255 TFAP2A JASPAR yes 5332639
chr3 123372240 123372255 TFAP2C JASPAR yes 5332640
chr3 123372240 123372255 TFAP2A JASPAR yes 71041281
chr3 123372240 123372255 TFAP2C JASPAR yes 71041282
chr3 123372252 123372255 MYB TRANSFAC yes 5332641
chr3 123372252 123372255 MYB TRANSFAC yes 71041283
chr3 123372257 123372266 NFIX JASPAR yes 5332642
chr3 123372257 123372266 NFIX JASPAR yes 71041284
chr3 123372257 123372267 NFIA JASPAR yes 5332643
chr3 123372257 123372267 NFIA JASPAR yes 71041285
chr3 123372259 123372265 NFIC JASPAR yes 5332644
chr3 123372259 123372265 NFIC JASPAR yes 71041286
chr3 123372260 123372270 MYF6 JASPAR yes 5332645
chr3 123372260 123372270 MYF6 JASPAR yes 71041287
chr3 123372270 123372291 ZNF263 JASPAR yes 5332646
chr3 123372270 123372291 ZNF263 JASPAR yes 71041288
chr3 123372273 123372294 ZNF263 JASPAR yes 5332647
chr3 123372273 123372294 ZNF263 JASPAR yes 71041289
chr3 123372275 123372288 ELF1 JASPAR yes 5332648
chr3 123372275 123372288 ELF1 JASPAR yes 71041290
chr3 123372281 123372291 SP1 JASPAR yes 5332649
chr3 123372281 123372291 SP1 JASPAR yes 71041291
chr3 123372307 123372319 NHLH1 JASPAR yes 5332650
chr3 123372307 123372319 NHLH1 JASPAR yes 71041292
chr3 123372308 123372318 NHLH1 JASPAR yes 5332651
chr3 123372308 123372318 NHLH1 JASPAR yes 71041293
chr3 123372314 123372319 TFAP2A TRANSFAC yes 5332652
chr3 123372314 123372319 TFAP2A TRANSFAC yes 71041294
chr3 123372314 123372320 MZF1 JASPAR yes 5332653
chr3 123372314 123372320 MZF1 JASPAR yes 71041295
chr3 123372321 123372332 FLI1 JASPAR yes 5332654
chr3 123372321 123372332 FLI1 JASPAR yes 71041296
chr3 123372322 123372332 GABPA JASPAR yes 5332655
chr3 123372322 123372332 GABPA JASPAR yes 71041297
chr3 123372322 123372335 ELF1 JASPAR yes 5332656
chr3 123372322 123372335 ELF1 JASPAR yes 71041298
chr3 123372328 123372332 NFE TRANSFAC yes 5332657
chr3 123372328 123372332 NFE TRANSFAC yes 71041299
chr3 123372366 123372371 H4TF1 TRANSFAC yes 5332658
chr3 123372366 123372371 H4TF1 TRANSFAC yes 71041300
chr3 123372376 123372381 H4TF1 TRANSFAC yes 5332659
chr3 123372376 123372381 H4TF1 TRANSFAC yes 71041301
chr3 123372376 123372387 CEBPB JASPAR yes 5332660
chr3 123372376 123372387 CEBPB JASPAR yes 71041302
chr3 123372377 123372388 CEBPA JASPAR yes 5332661
chr3 123372377 123372388 CEBPA JASPAR yes 71041303
chr3 123372387 123372402 HNF4G JASPAR yes 5332662
chr3 123372387 123372402 HNF4G JASPAR yes 71041304
chr3 123372391 123372397 SOX10 JASPAR yes 5332663
chr3 123372391 123372397 SOX10 JASPAR yes 71041305
chr3 123372401 123372413 NHLH1 JASPAR yes 5332664
chr3 123372401 123372413 NHLH1 JASPAR yes 71041306
chr3 123372407 123372417 SP1 JASPAR yes 5332665
chr3 123372407 123372417 SP1 JASPAR yes 71041307
chr3 123372409 123372415 MAZ TRANSFAC yes 5332666
chr3 123372409 123372415 MAZ TRANSFAC yes 71041308
chr3 123372412 123372433 ZNF263 JASPAR yes 5332667
chr3 123372412 123372433 ZNF263 JASPAR yes 71041309
chr3 123372415 123372436 ZNF263 JASPAR yes 5332668
chr3 123372415 123372436 ZNF263 JASPAR yes 71041310
chr3 123372424 123372434 SP1 JASPAR yes 5332669
chr3 123372424 123372434 SP1 JASPAR yes 71041311
chr3 123372424 123372445 ZNF263 JASPAR yes 5332670
chr3 123372424 123372445 ZNF263 JASPAR yes 71041312
chr3 123372425 123372434 SP1 TRANSFAC yes 5332671
chr3 123372425 123372434 SP1 TRANSFAC yes 71041313
chr3 123372426 123372432 MAZ TRANSFAC yes 5332672
chr3 123372426 123372432 MAZ TRANSFAC yes 71041314
chr3 123372465 123372474 THAP1 JASPAR yes 5332673
chr3 123372465 123372474 THAP1 JASPAR yes 71041315
chr3 123372466 123372472 YY1 JASPAR yes 5332674
chr3 123372466 123372472 YY1 JASPAR yes 71041316
SNP sites on vista42209[chr3:123372011-123372488]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 123372030 rs114123245 T A
ZNF263
6993057
chr3 123372154 rs144141076 G A no 6993058
chr3 123372156 rs550443928 G A
YY1
6993059
chr3 123372281 rs534797909 C T
CEBPB ELF1 SP1 ZNF263
6993060
Genes possibly regulated by vista42209[chr3:123372011-123372488]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 123209667 123304032 - PTPLB ENSG00000206527.5 123304032 0.81 0.99 4015 32021
Expression level of Genes
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miRNAs possibly regulated by vista42209[chr3:123372011-123372488]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results