EnhancerDB
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  3. vista42215[chr3:123396914-123397344]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42215[chr3:123396914-123397344]
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Tissue distribution of vista42215
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Transcription factor that possibly regulate vista42215[chr3:123396914-123397344]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 123396891 123397387 GATA3 UCSC Txn Factor no Conserved 108530112
chr3 123396906 123396921 FOXP1 JASPAR yes 5334349
chr3 123396906 123396921 FOXP1 JASPAR yes 71041522
chr3 123396911 123396917 TCF4 TRANSFAC yes 5334350
chr3 123396911 123396917 TCF4 TRANSFAC yes 71041523
chr3 123396917 123396935 SRF JASPAR yes 5334351
chr3 123396917 123396935 SRF JASPAR yes 71041524
chr3 123396920 123396932 SRF JASPAR yes 5334352
chr3 123396920 123396932 SRF JASPAR yes 71041525
chr3 123396933 123396943 MSC JASPAR yes 5334353
chr3 123396933 123396943 MSC JASPAR yes 71041526
chr3 123396935 123396950 MEF2A JASPAR yes 5334354
chr3 123396935 123396950 MEF2A JASPAR yes 71041527
chr3 123396936 123396951 MEF2C JASPAR yes 5334355
chr3 123396936 123396951 MEF2C JASPAR yes 71041528
chr3 123396937 123396949 MEF2A JASPAR yes 5334356
chr3 123396937 123396949 MEF2B JASPAR yes 5334357
chr3 123396937 123396949 MEF2D JASPAR yes 5334358
chr3 123396937 123396949 MEF2A JASPAR yes 71041529
chr3 123396937 123396949 MEF2B JASPAR yes 71041530
chr3 123396937 123396949 MEF2D JASPAR yes 71041531
chr3 123396938 123396948 MEF2A JASPAR yes 5334359
chr3 123396938 123396948 MEF2A JASPAR yes 71041532
chr3 123396939 123396943 YY1 TRANSFAC yes 5334360
chr3 123396939 123396943 YY1 TRANSFAC yes 71041533
chr3 123396947 123396959 NHLH1 JASPAR yes 5334361
chr3 123396947 123396959 NHLH1 JASPAR yes 71041534
chr3 123396950 123396955 MYC TRANSFAC yes 5334362
chr3 123396950 123396955 MYC TRANSFAC yes 71041535
chr3 123397031 123397037 TCF4 TRANSFAC yes 5334363
chr3 123397031 123397037 TCF4 TRANSFAC yes 71041536
chr3 123397043 123397053 ID4 JASPAR yes 5334364
chr3 123397043 123397053 ID4 JASPAR yes 71041537
chr3 123397048 123397052 NFE TRANSFAC yes 5334365
chr3 123397048 123397052 NFE TRANSFAC yes 71041538
chr3 123397056 123397068 PKNOX2 JASPAR yes 5334366
chr3 123397056 123397068 PKNOX2 JASPAR yes 71041539
chr3 123397057 123397066 SNAI2 JASPAR yes 5334367
chr3 123397057 123397066 SNAI2 JASPAR yes 71041540
chr3 123397057 123397067 HEY2 JASPAR yes 5334368
chr3 123397057 123397067 ID4 JASPAR yes 5334369
chr3 123397057 123397067 TCF4 JASPAR yes 5334370
chr3 123397057 123397067 HEY2 JASPAR yes 71041541
chr3 123397057 123397067 ID4 JASPAR yes 71041542
chr3 123397057 123397067 TCF4 JASPAR yes 71041543
chr3 123397083 123397096 ZBTB18 JASPAR yes 5334371
chr3 123397083 123397096 ZBTB18 JASPAR yes 71041544
chr3 123397098 123397119 ZNF263 JASPAR yes 5334372
chr3 123397098 123397119 ZNF263 JASPAR yes 71041545
chr3 123397099 123397120 ZNF263 JASPAR yes 5334373
chr3 123397099 123397120 ZNF263 JASPAR yes 71041546
chr3 123397104 123397108 NFE TRANSFAC yes 5334374
chr3 123397104 123397108 NFE TRANSFAC yes 71041547
chr3 123397112 123397124 E2F8 JASPAR yes 5334375
chr3 123397112 123397124 E2F8 JASPAR yes 71041548
chr3 123397116 123397122 MZF1 JASPAR yes 5334376
chr3 123397116 123397122 MZF1 JASPAR yes 71041549
chr3 123397133 123397137 YY1 TRANSFAC yes 5334377
chr3 123397133 123397137 YY1 TRANSFAC yes 71041550
chr3 123397140 123397152 E2F8 JASPAR yes 5334378
chr3 123397140 123397152 E2F8 JASPAR yes 71041551
chr3 123397148 123397163 RUNX2 JASPAR yes 5334379
chr3 123397148 123397163 RUNX2 JASPAR yes 71041552
chr3 123397149 123397159 RUNX3 JASPAR yes 5334380
chr3 123397149 123397159 RUNX3 JASPAR yes 71041553
chr3 123397149 123397160 RUNX1 JASPAR yes 5334381
chr3 123397149 123397160 RUNX1 JASPAR yes 71041554
chr3 123397150 123397170 RREB1 JASPAR yes 5334382
chr3 123397150 123397170 RREB1 JASPAR yes 71041555
chr3 123397157 123397172 RUNX2 JASPAR yes 5334383
chr3 123397157 123397172 RUNX2 JASPAR yes 71041556
chr3 123397158 123397168 RUNX3 JASPAR yes 5334384
chr3 123397158 123397168 RUNX3 JASPAR yes 71041557
chr3 123397158 123397169 RUNX1 JASPAR yes 5334385
chr3 123397158 123397169 RUNX1 JASPAR yes 71041558
chr3 123397160 123397181 ZNF263 JASPAR yes 5334386
chr3 123397160 123397181 ZNF263 JASPAR yes 71041559
chr3 123397162 123397172 TEAD1 JASPAR yes 5334387
chr3 123397162 123397172 TEAD4 JASPAR yes 5334388
chr3 123397162 123397172 TEAD1 JASPAR yes 71041560
chr3 123397162 123397172 TEAD4 JASPAR yes 71041561
chr3 123397162 123397174 TEAD1 JASPAR yes 5334389
chr3 123397162 123397174 TEAD1 JASPAR yes 71041562
chr3 123397163 123397171 TEAD3 JASPAR yes 5334390
chr3 123397163 123397171 TEAD3 JASPAR yes 71041563
chr3 123397163 123397184 ZNF263 JASPAR yes 5334391
chr3 123397163 123397184 ZNF263 JASPAR yes 71041564
chr3 123397166 123397173 SPIB JASPAR yes 5334392
chr3 123397166 123397173 SPIB JASPAR yes 71041565
chr3 123397166 123397187 ZNF263 JASPAR yes 5334393
chr3 123397166 123397187 ZNF263 JASPAR yes 71041566
chr3 123397171 123397181 SP1 JASPAR yes 5334394
chr3 123397171 123397181 SP1 JASPAR yes 71041567
chr3 123397172 123397193 ZNF263 JASPAR yes 5334395
chr3 123397172 123397193 ZNF263 JASPAR yes 71041568
chr3 123397182 123397185 MYB TRANSFAC yes 5334396
chr3 123397182 123397185 MYB TRANSFAC yes 71041569
chr3 123397186 123397200 RORA JASPAR yes 5334397
chr3 123397186 123397200 RORA JASPAR yes 71041570
chr3 123397187 123397197 RORA JASPAR yes 5334398
chr3 123397187 123397197 RORA JASPAR yes 71041571
chr3 123397225 123397246 ZNF263 JASPAR yes 5334399
chr3 123397225 123397246 ZNF263 JASPAR yes 71041572
chr3 123397226 123397234 TBX15 JASPAR yes 5334400
chr3 123397226 123397234 TBX15 JASPAR yes 71041573
chr3 123397230 123397241 E2F6 JASPAR yes 5334401
chr3 123397230 123397241 E2F6 JASPAR yes 71041574
chr3 123397245 123397256 FOSL2 JASPAR yes 5334402
chr3 123397245 123397256 JUNB JASPAR yes 5334403
chr3 123397245 123397256 FOSL2 JASPAR yes 71041575
chr3 123397245 123397256 JUNB JASPAR yes 71041576
chr3 123397246 123397257 FOS JASPAR yes 5334404
chr3 123397246 123397257 FOSL1 JASPAR yes 5334405
chr3 123397246 123397257 JUND JASPAR yes 5334406
chr3 123397246 123397257 FOS JASPAR yes 71041577
chr3 123397246 123397257 FOSL1 JASPAR yes 71041578
chr3 123397246 123397257 JUND JASPAR yes 71041579
chr3 123397247 123397261 JUN JASPAR yes 5334407
chr3 123397247 123397261 JUN JASPAR yes 71041580
chr3 123397248 123397255 JUN TRANSFAC yes 5334408
chr3 123397248 123397255 JUN TRANSFAC yes 71041581
chr3 123397248 123397259 BATF JASPAR yes 5334409
chr3 123397248 123397259 BATF JASPAR yes 71041582
chr3 123397268 123397271 MYB TRANSFAC yes 5334410
chr3 123397268 123397271 MYB TRANSFAC yes 71041583
chr3 123397270 123397288 RARA JASPAR yes 5334411
chr3 123397270 123397288 RARA JASPAR yes 71041584
chr3 123397280 123397284 NFE TRANSFAC yes 5334412
chr3 123397280 123397284 NFE TRANSFAC yes 71041585
chr3 123397283 123397300 RXRA JASPAR yes 5334413
chr3 123397283 123397300 RXRA JASPAR yes 71041586
chr3 123397284 123397299 PRDM1 JASPAR yes 5334414
chr3 123397284 123397299 PRDM1 JASPAR yes 71041587
chr3 123397287 123397308 ZNF263 JASPAR yes 5334415
chr3 123397287 123397308 ZNF263 JASPAR yes 71041588
chr3 123397295 123397311 SOX4 JASPAR yes 5334416
chr3 123397295 123397311 SOX4 JASPAR yes 71041589
chr3 123397300 123397320 RREB1 JASPAR yes 5334417
chr3 123397300 123397320 RREB1 JASPAR yes 71041590
chr3 123397305 123397325 RREB1 JASPAR yes 5334418
chr3 123397305 123397325 RREB1 JASPAR yes 71041591
chr3 123397319 123397325 ZNF354C JASPAR yes 5334419
chr3 123397319 123397325 ZNF354C JASPAR yes 71041592
chr3 123397322 123397333 ESRRA JASPAR yes 5334420
chr3 123397322 123397333 ESRRB JASPAR yes 5334421
chr3 123397322 123397333 ESRRA JASPAR yes 71041593
chr3 123397322 123397333 ESRRB JASPAR yes 71041594
chr3 123397330 123397341 NFKB1 JASPAR yes 5334422
chr3 123397330 123397341 NFKB1 JASPAR yes 71041595
SNP sites on vista42215[chr3:123396914-123397344]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 123396950 rs78319643 G A
GATA3 MEF2A MEF2C MYC NHLH1
6993210
chr3 123397255 rs555340211 A G
BATF FOS FOSL1 FOSL2 GATA3 JUN JUNB JUND
6993211
chr3 123397286 rs141791169 C T
GATA3 PRDM1 RARA RXRA
6993212
Genes possibly regulated by vista42215[chr3:123396914-123397344]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 123209667 123304032 - PTPLB ENSG00000206527.5 123304032 0.81 0.99 4015 7118
Expression level of Genes
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miRNAs possibly regulated by vista42215[chr3:123396914-123397344]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results