EnhancerDB
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  3. vista42227[chr3:123532813-123533098]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42227[chr3:123532813-123533098]
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Tissue distribution of vista42227
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Transcription factor that possibly regulate vista42227[chr3:123532813-123533098]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 123532838 123532846 FOXL1 JASPAR yes 5347218
chr3 123532838 123532846 FOXL1 JASPAR yes 71042230
chr3 123532845 123532862 ESR1 JASPAR yes 5347219
chr3 123532845 123532862 ESR1 JASPAR yes 71042231
chr3 123532883 123532893 SMAD3 JASPAR yes 5347220
chr3 123532883 123532893 SMAD3 JASPAR yes 71042232
chr3 123532900 123532914 TCF7L2 JASPAR yes 5347221
chr3 123532900 123532914 TCF7L2 JASPAR yes 71042233
chr3 123532900 123532915 LEF1 JASPAR yes 5347222
chr3 123532900 123532915 LEF1 JASPAR yes 71042234
chr3 123532904 123532910 TCF1 TRANSFAC yes 5347223
chr3 123532904 123532910 TCF1 TRANSFAC yes 71042235
chr3 123532917 123532923 MZF1 JASPAR yes 5347224
chr3 123532917 123532923 MZF1 JASPAR yes 71042236
chr3 123532921 123532934 ZBTB18 JASPAR yes 5347225
chr3 123532921 123532934 ZBTB18 JASPAR yes 71042237
chr3 123532922 123532934 NHLH1 JASPAR yes 5347226
chr3 123532922 123532934 NHLH1 JASPAR yes 71042238
chr3 123532923 123532933 NHLH1 JASPAR yes 5347227
chr3 123532923 123532933 NHLH1 JASPAR yes 71042239
chr3 123532967 123532977 RORA JASPAR yes 5347228
chr3 123532967 123532977 RORA JASPAR yes 71042240
chr3 123532977 123532993 RFX3 JASPAR yes 5347229
chr3 123532977 123532993 RFX4 JASPAR yes 5347230
chr3 123532977 123532993 RFX5 JASPAR yes 5347231
chr3 123532977 123532993 RFX3 JASPAR yes 71042241
chr3 123532977 123532993 RFX4 JASPAR yes 71042242
chr3 123532977 123532993 RFX5 JASPAR yes 71042243
chr3 123532978 123532997 RFX2 JASPAR yes 5347232
chr3 123532978 123532997 RFX2 JASPAR yes 71042244
chr3 123532988 123533002 JUN JASPAR yes 5347233
chr3 123532988 123533002 JUN JASPAR yes 71042245
chr3 123532990 123533001 BATF JASPAR yes 5347234
chr3 123532990 123533001 BATF JASPAR yes 71042246
chr3 123532991 123533002 JUNB JASPAR yes 5347235
chr3 123532991 123533002 JUNB JASPAR yes 71042247
chr3 123532992 123533003 FOS JASPAR yes 5347236
chr3 123532992 123533003 FOSL1 JASPAR yes 5347237
chr3 123532992 123533003 JUND JASPAR yes 5347238
chr3 123532992 123533003 NFE2 JASPAR yes 5347239
chr3 123532992 123533003 FOS JASPAR yes 71042248
chr3 123532992 123533003 FOSL1 JASPAR yes 71042249
chr3 123532992 123533003 JUND JASPAR yes 71042250
chr3 123532992 123533003 NFE2 JASPAR yes 71042251
chr3 123532993 123533002 JDP2 JASPAR yes 5347240
chr3 123532993 123533002 JDP2 JASPAR yes 71042252
chr3 123532993 123533004 FOSL2 JASPAR yes 5347241
chr3 123532993 123533004 JUNB JASPAR yes 5347242
chr3 123532993 123533004 FOSL2 JASPAR yes 71042253
chr3 123532993 123533004 JUNB JASPAR yes 71042254
chr3 123533030 123533035 GATA2 JASPAR yes 5347243
chr3 123533030 123533035 GATA2 JASPAR yes 71042255
chr3 123533034 123533045 PHOX2A JASPAR yes 5347244
chr3 123533034 123533045 PROP1 JASPAR yes 5347245
chr3 123533034 123533045 PHOX2A JASPAR yes 71042256
chr3 123533034 123533045 PROP1 JASPAR yes 71042257
chr3 123533050 123533060 SP1 JASPAR yes 5347246
chr3 123533050 123533060 SP1 JASPAR yes 71042258
chr3 123533058 123533073 FOXP1 JASPAR yes 5347247
chr3 123533058 123533073 FOXP1 JASPAR yes 71042259
chr3 123533060 123533072 FOXC2 JASPAR yes 5347248
chr3 123533060 123533072 FOXC2 JASPAR yes 71042260
chr3 123533062 123533077 STAT2 JASPAR yes 5347249
chr3 123533062 123533077 STAT2 JASPAR yes 71042261
chr3 123533063 123533075 IRF1 JASPAR yes 5347250
chr3 123533063 123533075 IRF1 JASPAR yes 71042262
chr3 123533074 123533080 SOX10 JASPAR yes 5347251
chr3 123533074 123533080 SOX10 JASPAR yes 71042263
chr3 123533080 123533085 GATA1 TRANSFAC yes 5347252
chr3 123533080 123533085 GATA1 TRANSFAC yes 71042264
chr3 123533085 123533100 RFX5 JASPAR yes 5347253
chr3 123533085 123533100 RFX5 JASPAR yes 71042265
SNP sites on vista42227[chr3:123532813-123533098]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 123532820 rs74788982 C T no 6994342
chr3 123532850 rs149721579 C T
ESR1
6994343
chr3 123532874 rs542851936 T C no 6994344
chr3 123532881 rs559514791 C G no 6994345
chr3 123533025 rs56950831 G T no 6994346
chr3 123533053 rs567395689 C A
SP1
6994347
chr3 123533077 rs535962011 A G
SOX10 STAT2
6994348
Genes possibly regulated by vista42227[chr3:123532813-123533098]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 123328896 123603178 - MYLK ENSG00000065534.14 123603178 0.95 0.96 4016 29920
Expression level of Genes
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miRNAs possibly regulated by vista42227[chr3:123532813-123533098]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results