EnhancerDB
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  3. vista42238[chr3:123824591-123825032]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42238[chr3:123824591-123825032]
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Tissue distribution of vista42238
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Transcription factor that possibly regulate vista42238[chr3:123824591-123825032]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 123824589 123824604 AR JASPAR yes 5356685
chr3 123824589 123824604 AR JASPAR yes 71042471
chr3 123824596 123824608 FOXI1 JASPAR yes 5356686
chr3 123824596 123824608 FOXI1 JASPAR yes 71042472
chr3 123824616 123824637 IRF1 JASPAR yes 5356687
chr3 123824616 123824637 IRF1 JASPAR yes 71042473
chr3 123824619 123824633 IRF7 JASPAR yes 5356688
chr3 123824619 123824633 IRF8 JASPAR yes 5356689
chr3 123824619 123824633 IRF7 JASPAR yes 71042474
chr3 123824619 123824633 IRF8 JASPAR yes 71042475
chr3 123824620 123824634 STAT1 JASPAR yes 5356690
chr3 123824620 123824634 STAT1 JASPAR yes 71042476
chr3 123824620 123824635 PRDM1 JASPAR yes 5356691
chr3 123824620 123824635 STAT2 JASPAR yes 5356692
chr3 123824620 123824635 PRDM1 JASPAR yes 71042477
chr3 123824620 123824635 STAT2 JASPAR yes 71042478
chr3 123824620 123824638 IRF2 JASPAR yes 5356693
chr3 123824620 123824638 IRF2 JASPAR yes 71042479
chr3 123824621 123824633 IRF1 JASPAR yes 5356694
chr3 123824621 123824633 IRF1 JASPAR yes 71042480
chr3 123824621 123824636 LEF1 JASPAR yes 5356695
chr3 123824621 123824636 LEF1 JASPAR yes 71042481
chr3 123824625 123824631 TCF4 TRANSFAC yes 5356696
chr3 123824625 123824631 TCF4 TRANSFAC yes 71042482
chr3 123824629 123824644 MEF2C JASPAR yes 5356697
chr3 123824629 123824644 MEF2C JASPAR yes 71042483
chr3 123824630 123824645 MEF2A JASPAR yes 5356698
chr3 123824630 123824645 MEF2A JASPAR yes 71042484
chr3 123824631 123824643 MEF2A JASPAR yes 5356699
chr3 123824631 123824643 MEF2A JASPAR yes 71042485
chr3 123824640 123824658 NFYA JASPAR yes 5356700
chr3 123824640 123824658 NFYA JASPAR yes 71042486
chr3 123824644 123824660 ZNF143 JASPAR yes 5356701
chr3 123824644 123824660 ZNF143 JASPAR yes 71042487
chr3 123824652 123824657 SP1 TRANSFAC yes 5356702
chr3 123824652 123824657 SP1 TRANSFAC yes 71042488
chr3 123824659 123824663 YY1 TRANSFAC yes 5356703
chr3 123824659 123824663 YY1 TRANSFAC yes 71042489
chr3 123824660 123824670 RORA JASPAR yes 5356704
chr3 123824660 123824670 RORA JASPAR yes 71042490
chr3 123824661 123824674 NR2F1 JASPAR yes 5356705
chr3 123824661 123824674 NR2F1 JASPAR yes 71042491
chr3 123824665 123824669 ESR1 TRANSFAC yes 5356706
chr3 123824665 123824669 ESR1 TRANSFAC yes 71042492
chr3 123824678 123824684 TCF4 TRANSFAC yes 5356707
chr3 123824678 123824684 TCF4 TRANSFAC yes 71042493
chr3 123824688 123824694 PEA3 TRANSFAC yes 5356708
chr3 123824688 123824694 PEA3 TRANSFAC yes 71042494
chr3 123824689 123824697 EHF JASPAR yes 5356709
chr3 123824689 123824697 EHF JASPAR yes 71042495
chr3 123824737 123824751 RXRB JASPAR yes 5356710
chr3 123824737 123824751 RXRG JASPAR yes 5356711
chr3 123824737 123824751 RXRB JASPAR yes 71042496
chr3 123824737 123824751 RXRG JASPAR yes 71042497
chr3 123824756 123824762 HiNF-A TRANSFAC yes 5356712
chr3 123824756 123824762 HiNF-A TRANSFAC yes 71042498
chr3 123824765 123824777 FOXC2 JASPAR yes 5356713
chr3 123824765 123824777 FOXC2 JASPAR yes 71042499
chr3 123824767 123824771 YY1 TRANSFAC yes 5356714
chr3 123824767 123824771 YY1 TRANSFAC yes 71042500
chr3 123824771 123824776 GATA2 JASPAR yes 5356715
chr3 123824771 123824776 GATA2 JASPAR yes 71042501
chr3 123824777 123824793 POU4F3 JASPAR yes 5356716
chr3 123824777 123824793 POU4F3 JASPAR yes 71042502
chr3 123824779 123824791 FOXI1 JASPAR yes 5356717
chr3 123824779 123824791 FOXI1 JASPAR yes 71042503
chr3 123824779 123824793 POU4F1 JASPAR yes 5356718
chr3 123824779 123824793 POU4F1 JASPAR yes 71042504
chr3 123824794 123824810 SOX4 JASPAR yes 5356719
chr3 123824794 123824810 SOX4 JASPAR yes 71042505
chr3 123824795 123824810 SOX21 JASPAR yes 5356720
chr3 123824795 123824810 SOX21 JASPAR yes 71042506
chr3 123824823 123824827 YY1 TRANSFAC yes 5356721
chr3 123824823 123824827 YY1 TRANSFAC yes 71042507
chr3 123824835 123824839 TEAD2 TRANSFAC yes 5356722
chr3 123824835 123824839 TEAD2 TRANSFAC yes 71042508
chr3 123824837 123824840 MYB TRANSFAC yes 5356723
chr3 123824837 123824840 MYB TRANSFAC yes 71042509
chr3 123824838 123824854 POU4F3 JASPAR yes 5356724
chr3 123824838 123824854 POU4F3 JASPAR yes 71042510
chr3 123824840 123824854 POU4F1 JASPAR yes 5356725
chr3 123824840 123824854 POU4F1 JASPAR yes 71042511
chr3 123824841 123824855 POU4F1 JASPAR yes 5356726
chr3 123824841 123824855 POU4F1 JASPAR yes 71042512
chr3 123824841 123824857 POU4F3 JASPAR yes 5356727
chr3 123824841 123824857 POU4F3 JASPAR yes 71042513
chr3 123824871 123824883 TEAD1 JASPAR yes 5356728
chr3 123824871 123824883 TEAD1 JASPAR yes 71042514
chr3 123824871 123824888 BCL6B JASPAR yes 5356729
chr3 123824871 123824888 BCL6B JASPAR yes 71042515
chr3 123824878 123824889 FOSL2 JASPAR yes 5356730
chr3 123824878 123824889 JUNB JASPAR yes 5356731
chr3 123824878 123824889 FOSL2 JASPAR yes 71042516
chr3 123824878 123824889 JUNB JASPAR yes 71042517
chr3 123824879 123824890 FOSL1 JASPAR yes 5356732
chr3 123824879 123824890 FOSL1 JASPAR yes 71042518
chr3 123824880 123824887 JUN TRANSFAC yes 5356733
chr3 123824880 123824887 JUN TRANSFAC yes 71042519
chr3 123824892 123824903 FOXH1 JASPAR yes 5356734
chr3 123824892 123824903 FOXH1 JASPAR yes 71042520
chr3 123824911 123824914 MYB TRANSFAC yes 5356735
chr3 123824911 123824914 MYB TRANSFAC yes 71042521
chr3 123824914 123824919 MYC TRANSFAC yes 5356736
chr3 123824914 123824919 MYC TRANSFAC yes 71042522
chr3 123824929 123824932 MYB TRANSFAC yes 5356737
chr3 123824929 123824932 MYB TRANSFAC yes 71042523
chr3 123824930 123824940 MSC JASPAR yes 5356738
chr3 123824930 123824940 MSC JASPAR yes 71042524
chr3 123824939 123824945 GATA1 TRANSFAC yes 5356739
chr3 123824939 123824945 GATA1 TRANSFAC yes 71042525
chr3 123824941 123824950 NKX3-2 JASPAR yes 5356740
chr3 123824941 123824950 NKX3-2 JASPAR yes 71042526
chr3 123824949 123824963 IRF7 JASPAR yes 5356741
chr3 123824949 123824963 IRF7 JASPAR yes 71042527
chr3 123824964 123824983 CTCF JASPAR yes 5356742
chr3 123824964 123824983 CTCF JASPAR yes 71042528
chr3 123824970 123824991 ZNF263 JASPAR yes 5356743
chr3 123824970 123824991 ZNF263 JASPAR yes 71042529
chr3 123824987 123824992 MYB TRANSFAC yes 5356744
chr3 123824987 123824992 MYB TRANSFAC yes 71042530
chr3 123824992 123824998 SOX10 JASPAR yes 5356745
chr3 123824992 123824998 SOX10 JASPAR yes 71042531
chr3 123825009 123825022 SMAD2 JASPAR yes 5356746
chr3 123825009 123825022 SMAD2 JASPAR yes 71042532
chr3 123825021 123825031 SP1 JASPAR yes 5356747
chr3 123825021 123825031 SP1 JASPAR yes 71042533
chr3 123825022 123825029 CEBPA TRANSFAC yes 5356748
chr3 123825022 123825029 CEBPA TRANSFAC yes 71042534
chr3 123825024 123825034 MZF1 JASPAR yes 5356749
chr3 123825024 123825034 MZF1 JASPAR yes 71042535
chr3 123825032 123825047 SOX21 JASPAR yes 5356750
chr3 123825032 123825047 SOX21 JASPAR yes 71042536
chr3 123825032 123825048 SOX4 JASPAR yes 5356751
chr3 123825032 123825048 SOX4 JASPAR yes 71042537
SNP sites on vista42238[chr3:123824591-123825032]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 123824812 rs142384672 C T no 6995129
chr3 123824829 rs192230774 G T no 6995130
chr3 123824895 rs552032848 C T
FOXH1
6995131
chr3 123825006 rs551777945 A G no 6995132
Genes possibly regulated by vista42238[chr3:123824591-123825032]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 123798870 124445172 + KALRN ENSG00000160145.11 123798870 0.71 0.98 4019 74279
Expression level of Genes
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miRNAs possibly regulated by vista42238[chr3:123824591-123825032]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results