EnhancerDB
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  3. vista42248[chr3:124419861-124420177]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42248[chr3:124419861-124420177]
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Tissue distribution of vista42248
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Transcription factor that possibly regulate vista42248[chr3:124419861-124420177]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 124419557 124420193 POLR2A UCSC Txn Factor no Conserved 108530125
chr3 124419776 124420052 USF2 UCSC Txn Factor no Conserved 108530126
chr3 124419799 124420078 USF1 UCSC Txn Factor no Conserved 108530127
chr3 124419901 124420113 RFX5 UCSC Txn Factor no Conserved 108530128
chr3 124419922 124420154 BHLHE40 UCSC Txn Factor no Conserved 108530129
chr3 124419926 124420169 FOSL2 UCSC Txn Factor no Conserved 108530130
chr3 124419865 124419876 STAT1 JASPAR yes 5396106
chr3 124419865 124419876 STAT1 JASPAR yes 71043142
chr3 124419885 124419900 TFAP2C JASPAR yes 5396107
chr3 124419885 124419900 TFAP2C JASPAR yes 71043143
chr3 124419892 124419903 ESRRA JASPAR yes 5396108
chr3 124419892 124419903 ESRRA JASPAR yes 71043144
chr3 124419892 124419905 NR2F1 JASPAR yes 5396109
chr3 124419892 124419905 NR2F1 JASPAR yes 71043145
chr3 124419896 124419900 ESR1 TRANSFAC yes 5396110
chr3 124419896 124419900 ESR1 TRANSFAC yes 71043146
chr3 124419897 124419907 TFAP4 JASPAR yes 5396111
chr3 124419897 124419907 TFAP4 JASPAR yes 71043147
chr3 124419915 124419925 TFEB JASPAR yes 5396112
chr3 124419915 124419925 TFEC JASPAR yes 5396113
chr3 124419915 124419925 TFEB JASPAR yes 71043148
chr3 124419915 124419925 TFEC JASPAR yes 71043149
chr3 124419915 124419926 USF1 JASPAR yes 5396114
chr3 124419915 124419926 USF2 JASPAR yes 5396115
chr3 124419915 124419926 USF1 JASPAR yes 71043150
chr3 124419915 124419926 USF2 JASPAR yes 71043151
chr3 124419917 124419930 NR2F1 JASPAR yes 5396116
chr3 124419917 124419930 NR2F1 JASPAR yes 71043152
chr3 124419921 124419936 NR2C2 JASPAR yes 5396117
chr3 124419921 124419936 NR2C2 JASPAR yes 71043153
chr3 124419971 124419986 FOXP1 JASPAR yes 5396118
chr3 124419971 124419986 FOXP1 JASPAR yes 71043154
chr3 124419979 124419994 MEF2C JASPAR yes 5396119
chr3 124419979 124419994 MEF2C JASPAR yes 71043155
chr3 124419982 124419986 YY1 TRANSFAC yes 5396120
chr3 124419982 124419986 YY1 TRANSFAC yes 71043156
chr3 124419987 124420002 HNF4A JASPAR yes 5396121
chr3 124419987 124420002 HNF4A JASPAR yes 71043157
chr3 124419988 124420002 NR2F1 JASPAR yes 5396122
chr3 124419988 124420002 RXRG JASPAR yes 5396123
chr3 124419988 124420002 NR2F1 JASPAR yes 71043158
chr3 124419988 124420002 RXRG JASPAR yes 71043159
chr3 124419988 124420003 HNF4G JASPAR yes 5396124
chr3 124419988 124420003 HNF4G JASPAR yes 71043160
chr3 124419996 124420000 H4TF2 TRANSFAC yes 5396125
chr3 124419996 124420000 H4TF2 TRANSFAC yes 71043161
chr3 124419998 124420004 MZF1 JASPAR yes 5396126
chr3 124419998 124420004 MZF1 JASPAR yes 71043162
chr3 124419998 124420017 CTCF JASPAR yes 5396127
chr3 124419998 124420017 CTCF JASPAR yes 71043163
chr3 124420052 124420071 PAX5 JASPAR yes 5396128
chr3 124420052 124420071 PAX5 JASPAR yes 71043164
chr3 124420065 124420076 FOS JASPAR yes 5396129
chr3 124420065 124420076 JUND JASPAR yes 5396130
chr3 124420065 124420076 NFE2 JASPAR yes 5396131
chr3 124420065 124420076 FOS JASPAR yes 71043165
chr3 124420065 124420076 JUND JASPAR yes 71043166
chr3 124420065 124420076 NFE2 JASPAR yes 71043167
chr3 124420066 124420077 FOSL2 JASPAR yes 5396132
chr3 124420066 124420077 FOSL2 JASPAR yes 71043168
chr3 124420066 124420079 HNF1B JASPAR yes 5396133
chr3 124420066 124420079 HNF1B JASPAR yes 71043169
chr3 124420066 124420080 JUN JASPAR yes 5396134
chr3 124420066 124420080 JUN JASPAR yes 71043170
chr3 124420067 124420073 JUN TRANSFAC yes 5396135
chr3 124420067 124420073 JUN TRANSFAC yes 71043171
chr3 124420073 124420082 NFIX JASPAR yes 5396136
chr3 124420073 124420082 NFIX JASPAR yes 71043172
chr3 124420075 124420081 NFIC JASPAR yes 5396137
chr3 124420075 124420081 NFIC JASPAR yes 71043173
chr3 124420079 124420084 ETS2 TRANSFAC yes 5396138
chr3 124420079 124420084 ETS2 TRANSFAC yes 71043174
chr3 124420109 124420115 NFIC JASPAR yes 5396139
chr3 124420109 124420115 NFIC JASPAR yes 71043175
chr3 124420127 124420137 NEUROG2 JASPAR yes 5396140
chr3 124420127 124420137 NEUROG2 JASPAR yes 71043176
chr3 124420164 124420178 GATA2 JASPAR yes 5396141
chr3 124420164 124420178 GATA2 JASPAR yes 71043177
chr3 124420166 124420174 GATA3 JASPAR yes 5396142
chr3 124420166 124420174 GATA3 JASPAR yes 71043178
chr3 124420169 124420180 PROP1 JASPAR yes 5396143
chr3 124420169 124420180 PROP1 JASPAR yes 71043179
chr3 124420171 124420181 POU6F2 JASPAR yes 5396144
chr3 124420171 124420181 POU6F2 JASPAR yes 71043180
chr3 124420172 124420182 EMX1 JASPAR yes 5396145
chr3 124420172 124420182 EMX1 JASPAR yes 71043181
chr3 124420173 124420181 NKX6-1 JASPAR yes 5396146
chr3 124420173 124420181 NKX6-2 JASPAR yes 5396147
chr3 124420173 124420181 NKX6-1 JASPAR yes 71043182
chr3 124420173 124420181 NKX6-2 JASPAR yes 71043183
chr3 124420175 124420179 YY1 TRANSFAC yes 5396148
chr3 124420175 124420179 YY1 TRANSFAC yes 71043184
SNP sites on vista42248[chr3:124419861-124420177]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 124419882 rs138024659 G A
POLR2A USF1 USF2
6998770
chr3 124419898 rs149539959 G A
ESR1 ESRRA NR2F1 POLR2A TFAP2C TFAP4 USF1 USF2
6998771
chr3 124420063 rs555853160 G A
BHLHE40 FOSL2 PAX5 POLR2A RFX5 USF1
6998772
chr3 124420102 rs2173852 G A,C
BHLHE40 FOSL2 POLR2A RFX5
6998773
Genes possibly regulated by vista42248[chr3:124419861-124420177]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 124449213 124464040 + UMPS ENSG00000114491.9 124449213 0.76 0.99 4020 70964
Expression level of Genes
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miRNAs possibly regulated by vista42248[chr3:124419861-124420177]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results