EnhancerDB
  1. Home
  2. Enhancers
  3. vista42259[chr3:124770854-124771405]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42259[chr3:124770854-124771405]
Back to top
Tissue distribution of vista42259
Back to top
Transcription factor that possibly regulate vista42259[chr3:124770854-124771405]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 124770483 124771173 RUNX3 UCSC Txn Factor no Conserved 108530151
chr3 124770737 124771184 RELA UCSC Txn Factor no Conserved 108530152
chr3 124770864 124770867 MYB TRANSFAC yes 5420002
chr3 124770864 124770867 MYB TRANSFAC yes 71043804
chr3 124770872 124770892 TP63 JASPAR yes 5420003
chr3 124770872 124770892 TP63 JASPAR yes 71043805
chr3 124770873 124770891 TP73 JASPAR yes 5420004
chr3 124770873 124770891 TP73 JASPAR yes 71043806
chr3 124770874 124770889 TP53 JASPAR yes 5420005
chr3 124770874 124770889 TP53 JASPAR yes 71043807
chr3 124770892 124770906 ONECUT3 JASPAR yes 5420006
chr3 124770892 124770906 ONECUT3 JASPAR yes 71043808
chr3 124770896 124770907 CDX2 JASPAR yes 5420007
chr3 124770896 124770907 CDX2 JASPAR yes 71043809
chr3 124770897 124770908 HOXA10 JASPAR yes 5420008
chr3 124770897 124770908 HOXA10 JASPAR yes 71043810
chr3 124770897 124770912 SOX21 JASPAR yes 5420009
chr3 124770897 124770912 SOX21 JASPAR yes 71043811
chr3 124770898 124770907 CDX1 JASPAR yes 5420010
chr3 124770898 124770907 CDX1 JASPAR yes 71043812
chr3 124770898 124770908 HOXA13 JASPAR yes 5420011
chr3 124770898 124770908 HOXB13 JASPAR yes 5420012
chr3 124770898 124770908 HOXD13 JASPAR yes 5420013
chr3 124770898 124770908 HOXA13 JASPAR yes 71043813
chr3 124770898 124770908 HOXB13 JASPAR yes 71043814
chr3 124770898 124770908 HOXD13 JASPAR yes 71043815
chr3 124770917 124770935 RARA JASPAR yes 5420014
chr3 124770917 124770935 RARA JASPAR yes 71043816
chr3 124770946 124770967 REST JASPAR yes 5420015
chr3 124770946 124770967 REST JASPAR yes 71043817
chr3 124770957 124770967 NFKB1 JASPAR yes 5420016
chr3 124770957 124770967 NFKB1 JASPAR yes 71043818
chr3 124770967 124770988 ZNF263 JASPAR yes 5420017
chr3 124770967 124770988 ZNF263 JASPAR yes 71043819
chr3 124770968 124770983 NR2C2 JASPAR yes 5420018
chr3 124770968 124770983 NR2C2 JASPAR yes 71043820
chr3 124770970 124770984 PLAG1 JASPAR yes 5420019
chr3 124770970 124770984 PLAG1 JASPAR yes 71043821
chr3 124770970 124770991 ZNF263 JASPAR yes 5420020
chr3 124770970 124770991 ZNF263 JASPAR yes 71043822
chr3 124770971 124770977 SP1 TRANSFAC yes 5420021
chr3 124770971 124770977 SP1 TRANSFAC yes 71043823
chr3 124770972 124770983 E2F4 JASPAR yes 5420022
chr3 124770972 124770983 E2F6 JASPAR yes 5420023
chr3 124770972 124770983 E2F4 JASPAR yes 71043824
chr3 124770972 124770983 E2F6 JASPAR yes 71043825
chr3 124770972 124770993 ZNF263 JASPAR yes 5420024
chr3 124770972 124770993 ZNF263 JASPAR yes 71043826
chr3 124770973 124770984 E2F1 JASPAR yes 5420025
chr3 124770973 124770984 E2F1 JASPAR yes 71043827
chr3 124770978 124770988 SP1 JASPAR yes 5420026
chr3 124770978 124770988 SP1 JASPAR yes 71043828
chr3 124770993 124770997 YY1 TRANSFAC yes 5420027
chr3 124770993 124770997 YY1 TRANSFAC yes 71043829
chr3 124771004 124771016 PBX1 JASPAR yes 5420028
chr3 124771004 124771016 PBX1 JASPAR yes 71043830
chr3 124771012 124771023 FOXA1 JASPAR yes 5420029
chr3 124771012 124771023 FOXA1 JASPAR yes 71043831
chr3 124771012 124771027 FOXA1 JASPAR yes 5420030
chr3 124771012 124771027 FOXA1 JASPAR yes 71043832
chr3 124771023 124771040 BCL6B JASPAR yes 5420031
chr3 124771023 124771040 BCL6B JASPAR yes 71043833
chr3 124771031 124771041 NFKB1 JASPAR yes 5420032
chr3 124771031 124771041 NFKB1 JASPAR yes 71043834
chr3 124771032 124771042 RELA JASPAR yes 5420033
chr3 124771032 124771042 REL JASPAR yes 5420034
chr3 124771032 124771042 RELA JASPAR yes 71043835
chr3 124771032 124771042 REL JASPAR yes 71043836
chr3 124771035 124771055 RREB1 JASPAR yes 5420035
chr3 124771035 124771055 RREB1 JASPAR yes 71043837
chr3 124771036 124771042 MZF1 JASPAR yes 5420036
chr3 124771036 124771042 MZF1 JASPAR yes 71043838
chr3 124771037 124771057 RREB1 JASPAR yes 5420037
chr3 124771037 124771057 RREB1 JASPAR yes 71043839
chr3 124771038 124771058 RREB1 JASPAR yes 5420038
chr3 124771038 124771058 RREB1 JASPAR yes 71043840
chr3 124771041 124771053 ZBTB7C JASPAR yes 5420039
chr3 124771041 124771053 ZBTB7C JASPAR yes 71043841
chr3 124771045 124771065 RREB1 JASPAR yes 5420040
chr3 124771045 124771065 RREB1 JASPAR yes 71043842
chr3 124771048 124771058 ZNF740 JASPAR yes 5420041
chr3 124771048 124771058 ZNF740 JASPAR yes 71043843
chr3 124771049 124771061 INSM1 JASPAR yes 5420042
chr3 124771049 124771061 INSM1 JASPAR yes 71043844
chr3 124771078 124771097 CTCF JASPAR yes 5420043
chr3 124771078 124771097 CTCF JASPAR yes 71043845
chr3 124771088 124771099 E2F6 JASPAR yes 5420044
chr3 124771088 124771099 E2F6 JASPAR yes 71043846
chr3 124771092 124771097 ETS2 TRANSFAC yes 5420045
chr3 124771092 124771097 ETS2 TRANSFAC yes 71043847
chr3 124771098 124771113 PRDM1 JASPAR yes 5420046
chr3 124771098 124771113 PRDM1 JASPAR yes 71043848
chr3 124771102 124771112 MZF1 JASPAR yes 5420047
chr3 124771102 124771112 MZF1 JASPAR yes 71043849
chr3 124771105 124771111 SP1 TRANSFAC yes 5420048
chr3 124771105 124771111 SP1 TRANSFAC yes 71043850
chr3 124771106 124771121 TFAP2A JASPAR yes 5420049
chr3 124771106 124771121 TFAP2A JASPAR yes 71043851
chr3 124771108 124771123 TFAP2C JASPAR yes 5420050
chr3 124771108 124771123 TFAP2C JASPAR yes 71043852
chr3 124771109 124771122 TFAP2A JASPAR yes 5420051
chr3 124771109 124771122 TFAP2B JASPAR yes 5420052
chr3 124771109 124771122 TFAP2C JASPAR yes 5420053
chr3 124771109 124771122 TFAP2A JASPAR yes 71043853
chr3 124771109 124771122 TFAP2B JASPAR yes 71043854
chr3 124771109 124771122 TFAP2C JASPAR yes 71043855
chr3 124771120 124771124 NFE TRANSFAC yes 5420054
chr3 124771120 124771124 NFE TRANSFAC yes 71043856
chr3 124771168 124771182 SPI1 JASPAR yes 5420055
chr3 124771168 124771182 SPIC JASPAR yes 5420056
chr3 124771168 124771182 SPI1 JASPAR yes 71043857
chr3 124771168 124771182 SPIC JASPAR yes 71043858
chr3 124771187 124771193 SOX10 JASPAR yes 5420057
chr3 124771187 124771193 SOX10 JASPAR yes 71043859
chr3 124771215 124771219 YY1 TRANSFAC yes 5420058
chr3 124771215 124771219 YY1 TRANSFAC yes 71043860
chr3 124771218 124771237 REST JASPAR yes 5420059
chr3 124771218 124771237 REST JASPAR yes 71043861
chr3 124771219 124771222 MYB TRANSFAC yes 5420060
chr3 124771219 124771222 MYB TRANSFAC yes 71043862
chr3 124771247 124771258 FLI1 JASPAR yes 5420061
chr3 124771247 124771258 FLI1 JASPAR yes 71043863
chr3 124771251 124771256 ETS2 TRANSFAC yes 5420062
chr3 124771251 124771256 ETS2 TRANSFAC yes 71043864
chr3 124771254 124771269 TFAP2C JASPAR yes 5420063
chr3 124771254 124771269 TFAP2C JASPAR yes 71043865
chr3 124771257 124771268 EBF1 JASPAR yes 5420064
chr3 124771257 124771268 EBF1 JASPAR yes 71043866
chr3 124771272 124771276 YY1 TRANSFAC yes 5420065
chr3 124771272 124771276 YY1 TRANSFAC yes 71043867
chr3 124771323 124771327 YY1 TRANSFAC yes 5420066
chr3 124771323 124771327 YY1 TRANSFAC yes 71043868
chr3 124771332 124771346 E2F7 JASPAR yes 5420067
chr3 124771332 124771346 E2F7 JASPAR yes 71043869
chr3 124771333 124771345 E2F8 JASPAR yes 5420068
chr3 124771333 124771345 E2F8 JASPAR yes 71043870
chr3 124771335 124771346 E2F6 JASPAR yes 5420069
chr3 124771335 124771346 E2F6 JASPAR yes 71043871
chr3 124771336 124771341 SP1 TRANSFAC yes 5420070
chr3 124771336 124771341 SP1 TRANSFAC yes 71043872
chr3 124771339 124771357 NR3C1 JASPAR yes 5420071
chr3 124771339 124771357 NR3C1 JASPAR yes 71043873
chr3 124771350 124771355 ETS2 TRANSFAC yes 5420072
chr3 124771350 124771355 ETS2 TRANSFAC yes 71043874
chr3 124771357 124771371 ONECUT1 JASPAR yes 5420073
chr3 124771357 124771371 ONECUT2 JASPAR yes 5420074
chr3 124771357 124771371 ONECUT3 JASPAR yes 5420075
chr3 124771357 124771371 ONECUT1 JASPAR yes 71043875
chr3 124771357 124771371 ONECUT2 JASPAR yes 71043876
chr3 124771357 124771371 ONECUT3 JASPAR yes 71043877
chr3 124771361 124771374 POU2F2 JASPAR yes 5420076
chr3 124771361 124771374 POU2F2 JASPAR yes 71043878
chr3 124771361 124771375 POU1F1 JASPAR yes 5420077
chr3 124771361 124771375 POU1F1 JASPAR yes 71043879
chr3 124771369 124771373 YY1 TRANSFAC yes 5420078
chr3 124771369 124771373 YY1 TRANSFAC yes 71043880
chr3 124771387 124771398 E2F6 JASPAR yes 5420079
chr3 124771387 124771398 E2F6 JASPAR yes 71043881
SNP sites on vista42259[chr3:124770854-124771405]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 124770893 rs192189459 A C
ONECUT3 RELA RUNX3
7001077
chr3 124770953 rs140805670 AC A
RELA REST RUNX3
7001078
chr3 124770970 rs2948829 G A
NR2C2 PLAG1 RELA RUNX3 ZNF263
7001079
chr3 124770976 rs13325388 T G
E2F1 E2F4 E2F6 NR2C2 PLAG1 RELA RUNX3 SP1 ZNF263
7001080
chr3 124771058 rs186925031 A G
INSM1 RELA RREB1 RUNX3 ZNF740
7001081
chr3 124771081 rs190282002 C A
CTCF RELA RUNX3
7001082
chr3 124771085 rs80148240 C T
CTCF RELA RUNX3
7001083
chr3 124771137 rs533224351 G A
RELA RUNX3
7001084
chr3 124771232 rs9851127 C A
REST
7001085
chr3 124771251 rs77951000 C T
ETS2 FLI1
7001086
Genes possibly regulated by vista42259[chr3:124770854-124771405]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 124624289 124672663 - MUC13 ENSG00000173702.3 124672663 0.99 0.98 4022 1809
chr3 124684554 124774802 - HEG1 ENSG00000173706.8 124774802 0.83 0.96 4023 96603
Expression level of Genes
Back to top
miRNAs possibly regulated by vista42259[chr3:124770854-124771405]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results