EnhancerDB
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  3. vista42265[chr3:124860643-124860954]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42265[chr3:124860643-124860954]
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Tissue distribution of vista42265
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Transcription factor that possibly regulate vista42265[chr3:124860643-124860954]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 124860146 124860851 NFIC UCSC Txn Factor no Conserved 108530161
chr3 124860228 124861028 RUNX3 UCSC Txn Factor no Conserved 108530162
chr3 124860258 124860722 FOXM1 UCSC Txn Factor no Conserved 108530163
chr3 124860278 124860688 TBL1XR1 UCSC Txn Factor no Conserved 108530164
chr3 124860711 124861141 CTCF UCSC Txn Factor no Conserved 108530165
chr3 124860645 124860654 SOX9 JASPAR yes 5428654
chr3 124860645 124860654 SOX9 JASPAR yes 71044117
chr3 124860660 124860670 CEBPB JASPAR yes 5428655
chr3 124860660 124860670 CEBPD JASPAR yes 5428656
chr3 124860660 124860670 CEBPE JASPAR yes 5428657
chr3 124860660 124860670 CEBPG JASPAR yes 5428658
chr3 124860660 124860670 CEBPB JASPAR yes 71044118
chr3 124860660 124860670 CEBPD JASPAR yes 71044119
chr3 124860660 124860670 CEBPE JASPAR yes 71044120
chr3 124860660 124860670 CEBPG JASPAR yes 71044121
chr3 124860686 124860692 PEA3 TRANSFAC yes 5428659
chr3 124860686 124860692 PEA3 TRANSFAC yes 71044122
chr3 124860686 124860696 SP1 JASPAR yes 5428660
chr3 124860686 124860696 SP1 JASPAR yes 71044123
chr3 124860687 124860695 EHF JASPAR yes 5428661
chr3 124860687 124860695 EHF JASPAR yes 71044124
chr3 124860715 124860720 SP1 TRANSFAC yes 5428662
chr3 124860715 124860720 SP1 TRANSFAC yes 71044125
chr3 124860718 124860733 NR2C2 JASPAR yes 5428663
chr3 124860718 124860733 NR2C2 JASPAR yes 71044126
chr3 124860723 124860735 ZBTB7A JASPAR yes 5428664
chr3 124860723 124860735 ZBTB7A JASPAR yes 71044127
chr3 124860729 124860742 ELF1 JASPAR yes 5428665
chr3 124860729 124860742 ELF1 JASPAR yes 71044128
chr3 124860732 124860742 GABPA JASPAR yes 5428666
chr3 124860732 124860742 GABPA JASPAR yes 71044129
chr3 124860749 124860770 IRF1 JASPAR yes 5428667
chr3 124860749 124860770 IRF1 JASPAR yes 71044130
chr3 124860750 124860771 ZNF263 JASPAR yes 5428668
chr3 124860750 124860771 ZNF263 JASPAR yes 71044131
chr3 124860751 124860772 ZNF263 JASPAR yes 5428669
chr3 124860751 124860772 ZNF263 JASPAR yes 71044132
chr3 124860753 124860768 PRDM1 JASPAR yes 5428670
chr3 124860753 124860768 STAT2 JASPAR yes 5428671
chr3 124860753 124860768 PRDM1 JASPAR yes 71044133
chr3 124860753 124860768 STAT2 JASPAR yes 71044134
chr3 124860753 124860771 IRF2 JASPAR yes 5428672
chr3 124860753 124860771 IRF2 JASPAR yes 71044135
chr3 124860772 124860787 STAT1 JASPAR yes 5428673
chr3 124860772 124860787 STAT1 JASPAR yes 71044136
chr3 124860774 124860785 STAT1 JASPAR yes 5428674
chr3 124860774 124860785 STAT3 JASPAR yes 5428675
chr3 124860774 124860785 STAT1 JASPAR yes 71044137
chr3 124860774 124860785 STAT3 JASPAR yes 71044138
chr3 124860775 124860783 STAT6 TRANSFAC yes 5428676
chr3 124860775 124860783 STAT6 TRANSFAC yes 71044139
chr3 124860779 124860784 ETS2 TRANSFAC yes 5428677
chr3 124860779 124860784 ETS2 TRANSFAC yes 71044140
chr3 124860785 124860796 GCM1 JASPAR yes 5428678
chr3 124860785 124860796 GCM1 JASPAR yes 71044141
chr3 124860786 124860796 GCM2 JASPAR yes 5428679
chr3 124860786 124860796 GCM2 JASPAR yes 71044142
chr3 124860799 124860804 SP1 TRANSFAC yes 5428680
chr3 124860799 124860804 SP1 TRANSFAC yes 71044143
chr3 124860800 124860813 TFAP2A JASPAR yes 5428681
chr3 124860800 124860813 TFAP2B JASPAR yes 5428682
chr3 124860800 124860813 TFAP2C JASPAR yes 5428683
chr3 124860800 124860813 TFAP2A JASPAR yes 71044144
chr3 124860800 124860813 TFAP2B JASPAR yes 71044145
chr3 124860800 124860813 TFAP2C JASPAR yes 71044146
chr3 124860815 124860825 ETV6 JASPAR yes 5428684
chr3 124860815 124860825 ETV6 JASPAR yes 71044147
chr3 124860817 124860822 ETS2 TRANSFAC yes 5428685
chr3 124860817 124860822 ETS2 TRANSFAC yes 71044148
chr3 124860826 124860844 ESR1 JASPAR yes 5428686
chr3 124860826 124860844 ESR1 JASPAR yes 71044149
chr3 124860855 124860868 ELF1 JASPAR yes 5428687
chr3 124860855 124860868 ELF1 JASPAR yes 71044150
chr3 124860858 124860868 GABPA JASPAR yes 5428688
chr3 124860858 124860868 GABPA JASPAR yes 71044151
chr3 124860858 124860869 FLI1 JASPAR yes 5428689
chr3 124860858 124860869 FLI1 JASPAR yes 71044152
chr3 124860859 124860864 ETS2 TRANSFAC yes 5428690
chr3 124860859 124860864 ETS2 TRANSFAC yes 71044153
chr3 124860859 124860867 FEV JASPAR yes 5428691
chr3 124860859 124860867 FEV JASPAR yes 71044154
chr3 124860860 124860867 SPI1 JASPAR yes 5428692
chr3 124860860 124860867 SPI1 JASPAR yes 71044155
chr3 124860899 124860910 E2F4 JASPAR yes 5428693
chr3 124860899 124860910 E2F4 JASPAR yes 71044156
chr3 124860900 124860911 E2F1 JASPAR yes 5428694
chr3 124860900 124860911 E2F1 JASPAR yes 71044157
chr3 124860936 124860946 FIGLA JASPAR yes 5428695
chr3 124860936 124860946 ID4 JASPAR yes 5428696
chr3 124860936 124860946 TCF3 JASPAR yes 5428697
chr3 124860936 124860946 TCF4 JASPAR yes 5428698
chr3 124860936 124860946 FIGLA JASPAR yes 71044158
chr3 124860936 124860946 ID4 JASPAR yes 71044159
chr3 124860936 124860946 TCF3 JASPAR yes 71044160
chr3 124860936 124860946 TCF4 JASPAR yes 71044161
chr3 124860937 124860946 SNAI2 JASPAR yes 5428699
chr3 124860937 124860946 SNAI2 JASPAR yes 71044162
chr3 124860938 124860943 USF2 TRANSFAC yes 5428700
chr3 124860938 124860943 USF2 TRANSFAC yes 71044163
SNP sites on vista42265[chr3:124860643-124860954]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 124860738 rs531630795 A G,T
CTCF ELF1 GABPA NFIC RUNX3
7002029
chr3 124860795 rs74706137 C A,G
CTCF GCM1 GCM2 NFIC RUNX3
7002030
chr3 124860806 rs547467526 G A,C,T
CTCF NFIC RUNX3 TFAP2A TFAP2B TFAP2C
7002031
chr3 124860822 rs570569370 A G
CTCF ETS2 ETV6 NFIC RUNX3
7002032
chr3 124860862 rs75303442 G A
CTCF ELF1 ETS2 FEV FLI1 GABPA RUNX3 SPI1
7002033
Genes possibly regulated by vista42265[chr3:124860643-124860954]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 124684554 124774802 - HEG1 ENSG00000173706.8 124774802 0.83 0.96 4023 14159
Expression level of Genes
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miRNAs possibly regulated by vista42265[chr3:124860643-124860954]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results