EnhancerDB
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  3. vista42270[chr3:125053590-125053890]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42270[chr3:125053590-125053890]
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Tissue distribution of vista42270
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Transcription factor that possibly regulate vista42270[chr3:125053590-125053890]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 125053572 125053590 SRF JASPAR yes 5438646
chr3 125053572 125053590 SRF JASPAR yes 71044408
chr3 125053581 125053599 ESR1 JASPAR yes 5438650
chr3 125053581 125053599 ESR1 JASPAR yes 71044409
chr3 125053587 125053607 TP63 JASPAR yes 5438651
chr3 125053587 125053607 TP63 JASPAR yes 71044410
chr3 125053588 125053606 TP73 JASPAR yes 5438652
chr3 125053588 125053606 TP73 JASPAR yes 71044411
chr3 125053616 125053621 GATA2 JASPAR yes 5438653
chr3 125053616 125053621 GATA2 JASPAR yes 71044412
chr3 125053619 125053639 RREB1 JASPAR yes 5438654
chr3 125053619 125053639 RREB1 JASPAR yes 71044413
chr3 125053622 125053642 RREB1 JASPAR yes 5438655
chr3 125053622 125053642 RREB1 JASPAR yes 71044414
chr3 125053631 125053643 ZBTB7A JASPAR yes 5438656
chr3 125053631 125053643 ZBTB7A JASPAR yes 71044415
chr3 125053632 125053644 ZBTB7B JASPAR yes 5438657
chr3 125053632 125053644 ZBTB7C JASPAR yes 5438658
chr3 125053632 125053644 ZBTB7B JASPAR yes 71044416
chr3 125053632 125053644 ZBTB7C JASPAR yes 71044417
chr3 125053635 125053655 RREB1 JASPAR yes 5438659
chr3 125053635 125053655 RREB1 JASPAR yes 71044418
chr3 125053638 125053658 RREB1 JASPAR yes 5438660
chr3 125053638 125053658 RREB1 JASPAR yes 71044419
chr3 125053639 125053660 ZNF263 JASPAR yes 5438661
chr3 125053639 125053660 ZNF263 JASPAR yes 71044420
chr3 125053641 125053661 RREB1 JASPAR yes 5438662
chr3 125053641 125053661 RREB1 JASPAR yes 71044421
chr3 125053644 125053656 ZBTB7C JASPAR yes 5438663
chr3 125053644 125053656 ZBTB7C JASPAR yes 71044422
chr3 125053645 125053665 RREB1 JASPAR yes 5438664
chr3 125053645 125053665 RREB1 JASPAR yes 71044423
chr3 125053650 125053660 SP1 JASPAR yes 5438665
chr3 125053650 125053660 SP1 JASPAR yes 71044424
chr3 125053673 125053677 YY1 TRANSFAC yes 5438666
chr3 125053673 125053677 YY1 TRANSFAC yes 71044425
chr3 125053680 125053695 NR2C2 JASPAR yes 5438667
chr3 125053680 125053695 NR2C2 JASPAR yes 71044426
chr3 125053720 125053734 RORA JASPAR yes 5438668
chr3 125053720 125053734 RORA JASPAR yes 71044427
chr3 125053721 125053731 RORA JASPAR yes 5438669
chr3 125053721 125053731 RORA JASPAR yes 71044428
chr3 125053768 125053783 AR JASPAR yes 5438670
chr3 125053768 125053783 AR JASPAR yes 71044429
chr3 125053778 125053785 SPIB JASPAR yes 5438671
chr3 125053778 125053785 SPIB JASPAR yes 71044430
chr3 125053783 125053787 NFE TRANSFAC yes 5438672
chr3 125053783 125053787 NFE TRANSFAC yes 71044431
chr3 125053784 125053799 HSF1 JASPAR yes 5438673
chr3 125053784 125053799 HSF1 JASPAR yes 71044432
chr3 125053785 125053798 HSF1 JASPAR yes 5438674
chr3 125053785 125053798 HSF2 JASPAR yes 5438675
chr3 125053785 125053798 HSF1 JASPAR yes 71044433
chr3 125053785 125053798 HSF2 JASPAR yes 71044434
chr3 125053798 125053803 ETS2 TRANSFAC yes 5438676
chr3 125053798 125053803 ETS2 TRANSFAC yes 71044435
chr3 125053816 125053819 MYB TRANSFAC yes 5438677
chr3 125053816 125053819 MYB TRANSFAC yes 71044436
chr3 125053857 125053867 GSX1 JASPAR yes 5438678
chr3 125053857 125053867 GSX2 JASPAR yes 5438679
chr3 125053857 125053867 HOXA2 JASPAR yes 5438680
chr3 125053857 125053867 MEOX1 JASPAR yes 5438681
chr3 125053857 125053867 NOTO JASPAR yes 5438682
chr3 125053857 125053867 GSX1 JASPAR yes 71044437
chr3 125053857 125053867 GSX2 JASPAR yes 71044438
chr3 125053857 125053867 HOXA2 JASPAR yes 71044439
chr3 125053857 125053867 MEOX1 JASPAR yes 71044440
chr3 125053857 125053867 NOTO JASPAR yes 71044441
chr3 125053858 125053866 NKX6-1 JASPAR yes 5438683
chr3 125053858 125053866 NKX6-2 JASPAR yes 5438684
chr3 125053858 125053866 NKX6-1 JASPAR yes 71044442
chr3 125053858 125053866 NKX6-2 JASPAR yes 71044443
chr3 125053858 125053868 POU6F2 JASPAR yes 5438685
chr3 125053858 125053868 POU6F2 JASPAR yes 71044444
chr3 125053876 125053886 SREBF1 JASPAR yes 5438686
chr3 125053876 125053886 SREBF2 JASPAR yes 5438687
chr3 125053876 125053886 SREBF1 JASPAR yes 71044445
chr3 125053876 125053886 SREBF2 JASPAR yes 71044446
chr3 125053877 125053885 MGA JASPAR yes 5438688
chr3 125053877 125053885 MGA JASPAR yes 71044447
chr3 125053883 125053887 YY1 TRANSFAC yes 5438689
chr3 125053883 125053887 YY1 TRANSFAC yes 71044448
chr3 125053890 125053901 CEBPB JASPAR yes 5438690
chr3 125053890 125053901 CEBPB JASPAR yes 71044449
chr3 125053890 125053903 ATF4 JASPAR yes 5438691
chr3 125053890 125053903 ATF4 JASPAR yes 71044450
SNP sites on vista42270[chr3:125053590-125053890]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 125053593 rs190425056 A G
ESR1 TP63 TP73
7002926
chr3 125053692 rs9882663 C A
NR2C2
7002927
chr3 125053737 rs112767417 C T no 7002928
chr3 125053764 rs138046491 C G no 7002929
Genes possibly regulated by vista42270[chr3:125053590-125053890]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 124801480 124998021 - SLC12A8 ENSG00000221955.6 124998021 0.94 1.0 4024 44431
chr3 124944405 125094198 - ZNF148 ENSG00000163848.14 125094198 0.69 0.99 4025 59692
Expression level of Genes
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miRNAs possibly regulated by vista42270[chr3:125053590-125053890]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results